RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 ANKRD30AQ9BXX3 1397 aa25.8■■□□□ 1.72
HSPG2-208ENST00000471322 ESF1Q9H501 851 aaKnown RBP25.8■■□□□ 1.72
HSPG2-208ENST00000471322 CEBPAP49715 358 aaPredicted RBP25.79■■□□□ 1.72
HSPG2-208ENST00000471322 NCOA1Q15788 1441 aa25.78■■□□□ 1.72
HSPG2-208ENST00000471322 RAB3GAP2Q9H2M9 1393 aa25.76■■□□□ 1.71
HSPG2-208ENST00000471322 DUOX2Q9NRD8 1548 aa25.75■■□□□ 1.71
HSPG2-208ENST00000471322 DHX57Q6P158 1386 aaKnown RBP25.73■■□□□ 1.71
HSPG2-208ENST00000471322 ADGRL2O95490 1459 aa25.72■■□□□ 1.71
HSPG2-208ENST00000471322 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.68■■□□□ 1.7
HSPG2-208ENST00000471322 CLTCQ00610 1675 aaKnown RBP25.68■■□□□ 1.7
HSPG2-208ENST00000471322 HFM1A2PYH4 1435 aa25.67■■□□□ 1.7
HSPG2-208ENST00000471322 ERBINQ96RT1 1412 aa25.67■■□□□ 1.7
HSPG2-208ENST00000471322 WASHC2CQ9Y4E1 1318 aa25.67■■□□□ 1.7
HSPG2-208ENST00000471322 EIF2AK4Q9P2K8 1649 aaKnown RBP25.65■■□□□ 1.7
HSPG2-208ENST00000471322 ZMYM3Q14202 1370 aa25.65■■□□□ 1.7
HSPG2-208ENST00000471322 CNTLNQ9NXG0 1405 aa25.64■■□□□ 1.7
HSPG2-208ENST00000471322 ROCK1Q13464 1354 aa25.64■■□□□ 1.69
HSPG2-208ENST00000471322 ANKRD50Q9ULJ7 1429 aa25.64■■□□□ 1.69
HSPG2-208ENST00000471322 C3P01024 1663 aa25.62■■□□□ 1.69
HSPG2-208ENST00000471322 PPP6R1Q9UPN7 881 aa25.62■■□□□ 1.69
HSPG2-208ENST00000471322 RNF17Q9BXT8 1623 aaKnown RBP25.62■■□□□ 1.69
HSPG2-208ENST00000471322 MROH1Q8NDA8 1641 aa25.6■■□□□ 1.69
HSPG2-208ENST00000471322 KDM5DQ9BY66 1539 aa25.6■■□□□ 1.69
HSPG2-208ENST00000471322 ACIN1Q9UKV3 1341 aaKnown RBP25.59■■□□□ 1.69
HSPG2-208ENST00000471322 NAIPQ13075 1403 aa25.58■■□□□ 1.69
HSPG2-208ENST00000471322 MROH2AA6NES4 1674 aa25.56■■□□□ 1.68
HSPG2-208ENST00000471322 FBXO31Q5XUX0 539 aaPredicted RBP25.55■■□□□ 1.68
HSPG2-208ENST00000471322 ABCC3O15438 1527 aa25.54■■□□□ 1.68
HSPG2-208ENST00000471322 PRDM15P57071 1507 aaPredicted RBP25.53■■□□□ 1.68
HSPG2-208ENST00000471322 CEP152O94986 1710 aa25.52■■□□□ 1.68
HSPG2-208ENST00000471322 DEPDC5O75140 1603 aa25.52■■□□□ 1.68
HSPG2-208ENST00000471322 KANK1Q14678 1352 aa25.51■■□□□ 1.67
HSPG2-208ENST00000471322 HSPA2P54652 639 aa25.49■■□□□ 1.67
HSPG2-208ENST00000471322 LMTK3Q96Q04 1460 aa25.49■■□□□ 1.67
HSPG2-208ENST00000471322 FAM135AQ9P2D6 1515 aa25.47■■□□□ 1.67
HSPG2-208ENST00000471322 ZC3H13Q5T200 1668 aaKnown RBP25.46■■□□□ 1.67
HSPG2-208ENST00000471322 PZPP20742 1482 aa25.45■■□□□ 1.67
HSPG2-208ENST00000471322 NPATQ14207 1427 aa25.45■■□□□ 1.66
HSPG2-208ENST00000471322 CAMSAP1Q5T5Y3 1602 aa25.44■■□□□ 1.66
HSPG2-208ENST00000471322 UHRF1BP1Q6BDS2 1440 aa25.44■■□□□ 1.66
HSPG2-208ENST00000471322 CFAP65Q6ZU64 1925 aaKnown RBP25.43■■□□□ 1.66
HSPG2-208ENST00000471322 GCC2Q8IWJ2 1684 aa25.42■■□□□ 1.66
HSPG2-208ENST00000471322 PREX1Q8TCU6 1659 aa25.42■■□□□ 1.66
HSPG2-208ENST00000471322 SETD1BQ9UPS6 1966 aaKnown RBP25.42■■□□□ 1.66
HSPG2-208ENST00000471322 NUP155O75694 1391 aa25.42■■□□□ 1.66
HSPG2-208ENST00000471322 VWDEQ8N2E2 1590 aa25.42■■□□□ 1.66
HSPG2-208ENST00000471322 UNC13BO14795 1591 aa25.41■■□□□ 1.66
HSPG2-208ENST00000471322 TNRQ92752 1358 aa25.39■■□□□ 1.66
HSPG2-208ENST00000471322 LMTK2Q8IWU2 1503 aa25.37■■□□□ 1.65
HSPG2-208ENST00000471322 TRIM52Q96A61 297 aa25.36■■□□□ 1.65
HSPG2-208ENST00000471322 ERVK-7P63135 1459 aa25.35■■□□□ 1.65
HSPG2-208ENST00000471322 MYO3AQ8NEV4 1616 aa25.35■■□□□ 1.65
HSPG2-208ENST00000471322 TIMELESSQ9UNS1 1208 aa25.35■■□□□ 1.65
HSPG2-208ENST00000471322 ARHGAP31Q2M1Z3 1444 aa25.34■■□□□ 1.65
HSPG2-208ENST00000471322 EFCAB6Q5THR3 1501 aa25.33■■□□□ 1.65
HSPG2-208ENST00000471322 SPATA31D1Q6ZQQ2 1576 aa25.31■■□□□ 1.64
HSPG2-208ENST00000471322 IQGAP3Q86VI3 1631 aa25.31■■□□□ 1.64
HSPG2-208ENST00000471322 CEP170BQ9Y4F5 1589 aaPredicted RBP25.29■■□□□ 1.64
HSPG2-208ENST00000471322 TET3O43151 1660 aa25.29■■□□□ 1.64
HSPG2-208ENST00000471322 A2ML1A8K2U0 1454 aa25.25■■□□□ 1.63
HSPG2-208ENST00000471322 E9PCH4 1651 aa25.24■■□□□ 1.63
HSPG2-208ENST00000471322 NLRP1Q9C000 1473 aa25.24■■□□□ 1.63
HSPG2-208ENST00000471322 ZNF142P52746 1687 aaPredicted RBP25.23■■□□□ 1.63
HSPG2-208ENST00000471322 MPHOSPH9Q99550 1183 aa25.23■■□□□ 1.63
HSPG2-208ENST00000471322 SLC4A1APQ9BWU0 796 aaKnown RBP25.22■■□□□ 1.63
HSPG2-208ENST00000471322 NOS1P29475 1434 aa25.22■■□□□ 1.63
HSPG2-208ENST00000471322 RPRD2Q5VT52 1461 aaKnown RBP25.22■■□□□ 1.63
HSPG2-208ENST00000471322 SYNMO15061 1565 aa25.22■■□□□ 1.63
HSPG2-208ENST00000471322 IDI1Q13907 227 aa25.21■■□□□ 1.63
HSPG2-208ENST00000471322 SIN3AQ96ST3 1273 aa25.21■■□□□ 1.63
HSPG2-208ENST00000471322 UGGT1Q9NYU2 1555 aa25.2■■□□□ 1.62
HSPG2-208ENST00000471322 ZNF316A6NFI3 1004 aaPredicted RBP25.19■■□□□ 1.62
HSPG2-208ENST00000471322 NEUROD1Q13562 356 aa25.19■■□□□ 1.62
HSPG2-208ENST00000471322 NCKAP5LQ9HCH0 1330 aa25.19■■□□□ 1.62
HSPG2-208ENST00000471322 PKD2Q13563 968 aa25.19■■□□□ 1.62
HSPG2-208ENST00000471322 FOXD1Q16676 465 aa25.18■■□□□ 1.62
HSPG2-208ENST00000471322 STAG3Q9UJ98 1225 aa25.17■■□□□ 1.62
HSPG2-208ENST00000471322 THEMISQ8N1K5 641 aaPredicted RBP25.16■■□□□ 1.62
HSPG2-208ENST00000471322 STRCQ7RTU9 1775 aa25.16■■□□□ 1.62
HSPG2-208ENST00000471322 PIK3C2BO00750 1634 aa25.14■■□□□ 1.62
HSPG2-208ENST00000471322 CHGAP10645 457 aaKnown RBP25.12■■□□□ 1.61
HSPG2-208ENST00000471322 SLC52A1Q9NWF4 448 aa25.12■■□□□ 1.61
HSPG2-208ENST00000471322 UBR1Q8IWV7 1749 aa25.11■■□□□ 1.61
HSPG2-208ENST00000471322 TONSLQ96HA7 1378 aa25.09■■□□□ 1.61
HSPG2-208ENST00000471322 PLA2R1Q13018 1463 aa25.08■■□□□ 1.61
HSPG2-208ENST00000471322 ANKLE2Q86XL3 938 aa25.07■■□□□ 1.6
HSPG2-208ENST00000471322 SPHKAPQ2M3C7 1700 aa25.06■■□□□ 1.6
HSPG2-208ENST00000471322 PTPRTO14522 1441 aa25.06■■□□□ 1.6
HSPG2-208ENST00000471322 PPP1R15AO75807 674 aaPredicted RBP25.04■■□□□ 1.6
HSPG2-208ENST00000471322 SENP3Q9H4L4 574 aaPredicted RBP25.04■■□□□ 1.6
HSPG2-208ENST00000471322 DMRT2Q9Y5R5 561 aa25.04■■□□□ 1.6
HSPG2-208ENST00000471322 ANKRD30BQ9BXX2 1392 aa25.04■■□□□ 1.6
HSPG2-208ENST00000471322 ADGRB3O60242 1522 aa25.03■■□□□ 1.6
HSPG2-208ENST00000471322 LTKP29376 864 aa25.03■■□□□ 1.6
HSPG2-208ENST00000471322 TXNDC2Q86VQ3 553 aa25.02■■□□□ 1.6
HSPG2-208ENST00000471322 TMEM2Q9UHN6 1383 aa25.01■■□□□ 1.59
HSPG2-208ENST00000471322 MYO5BQ9ULV0 1848 aa25■■□□□ 1.59
HSPG2-208ENST00000471322 TRPM2O94759 1503 aa24.99■■□□□ 1.59
HSPG2-208ENST00000471322 NUTM2DQ5VT03 806 aaPredicted RBP24.99■■□□□ 1.59
HSPG2-208ENST00000471322 TMEM131LA2VDJ0 1609 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms