RNA–Protein interactions for RNA: ENST00000471259.1

MRPL40-203, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-203ENST00000471259 SCAF1Q9H7N4 1312 aaKnown RBP18.19■□□□□ 0.5
MRPL40-203ENST00000471259 TNRQ92752 1358 aa18.17■□□□□ 0.5
MRPL40-203ENST00000471259 DNMT1P26358 1616 aaKnown RBP18.17■□□□□ 0.5
MRPL40-203ENST00000471259 ANKLE2Q86XL3 938 aa18.17■□□□□ 0.5
MRPL40-203ENST00000471259 THEMISQ8N1K5 641 aaPredicted RBP18.17■□□□□ 0.5
MRPL40-203ENST00000471259 EHBP1L1Q8N3D4 1523 aa18.17■□□□□ 0.5
MRPL40-203ENST00000471259 KIF3BO15066 747 aa18.16■□□□□ 0.5
MRPL40-203ENST00000471259 WASHC2CQ9Y4E1 1318 aa18.16■□□□□ 0.5
MRPL40-203ENST00000471259 POLR1AO95602 1720 aaPredicted RBP18.15■□□□□ 0.5
MRPL40-203ENST00000471259 CEP162Q5TB80 1403 aa18.15■□□□□ 0.5
MRPL40-203ENST00000471259 MBD5Q9P267 1494 aa18.14■□□□□ 0.5
MRPL40-203ENST00000471259 PZPP20742 1482 aa18.14■□□□□ 0.49
MRPL40-203ENST00000471259 KDM5DQ9BY66 1539 aa18.13■□□□□ 0.49
MRPL40-203ENST00000471259 TIAM1Q13009 1591 aa18.13■□□□□ 0.49
MRPL40-203ENST00000471259 SHANK2Q9UPX8 1470 aa18.13■□□□□ 0.49
MRPL40-203ENST00000471259 TSPY4P0CV99 314 aa18.12■□□□□ 0.49
MRPL40-203ENST00000471259 TSPY10P0CW01 314 aa18.12■□□□□ 0.49
MRPL40-203ENST00000471259 PIP4K2BP78356 416 aa18.12■□□□□ 0.49
MRPL40-203ENST00000471259 ZNF644Q9H582 1327 aaPredicted RBP18.12■□□□□ 0.49
MRPL40-203ENST00000471259 CCDC141Q6ZP82 1450 aa18.12■□□□□ 0.49
MRPL40-203ENST00000471259 NLRP1Q9C000 1473 aa18.12■□□□□ 0.49
MRPL40-203ENST00000471259 MIA2Q96PC5 1412 aa18.09■□□□□ 0.49
MRPL40-203ENST00000471259 HSPA1LP34931 641 aa18.09■□□□□ 0.49
MRPL40-203ENST00000471259 ADRA2BP18089 450 aa18.08■□□□□ 0.48
MRPL40-203ENST00000471259 FBXO31Q5XUX0 539 aaPredicted RBP18.08■□□□□ 0.48
MRPL40-203ENST00000471259 UGGT1Q9NYU2 1555 aa18.08■□□□□ 0.48
MRPL40-203ENST00000471259 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.07■□□□□ 0.483e-7■■■□□ 14.6
MRPL40-203ENST00000471259 NPHP4O75161 1426 aaPredicted RBP18.06■□□□□ 0.48
MRPL40-203ENST00000471259 DEPDC5O75140 1603 aa18.05■□□□□ 0.48
MRPL40-203ENST00000471259 MED1Q15648 1581 aaPredicted RBP18.05■□□□□ 0.48
MRPL40-203ENST00000471259 NEURL4Q96JN8 1562 aa18.05■□□□□ 0.48
MRPL40-203ENST00000471259 MED14O60244 1454 aa18.05■□□□□ 0.48
MRPL40-203ENST00000471259 CAMSAP2Q08AD1 1489 aa18.04■□□□□ 0.48
MRPL40-203ENST00000471259 NCOA2Q15596 1464 aa18.01■□□□□ 0.47
MRPL40-203ENST00000471259 ARHGEF5Q12774 1597 aa18.01■□□□□ 0.47
MRPL40-203ENST00000471259 VWDEQ8N2E2 1590 aa18■□□□□ 0.47
MRPL40-203ENST00000471259 ZC3H13Q5T200 1668 aaKnown RBP17.99■□□□□ 0.47
MRPL40-203ENST00000471259 IQGAP1P46940 1657 aa17.99■□□□□ 0.47
MRPL40-203ENST00000471259 SYNMO15061 1565 aa17.96■□□□□ 0.47
MRPL40-203ENST00000471259 RNF17Q9BXT8 1623 aaKnown RBP17.94■□□□□ 0.46
MRPL40-203ENST00000471259 EIF2AK4Q9P2K8 1649 aaKnown RBP17.94■□□□□ 0.46
MRPL40-203ENST00000471259 MAST1Q9Y2H9 1570 aa17.92■□□□□ 0.46
MRPL40-203ENST00000471259 EID1Q9Y6B2 187 aa17.92■□□□□ 0.46
MRPL40-203ENST00000471259 ABCC3O15438 1527 aa17.92■□□□□ 0.46
MRPL40-203ENST00000471259 ERVK-7P63135 1459 aa17.91■□□□□ 0.46
MRPL40-203ENST00000471259 LRRC7Q96NW7 1537 aa17.91■□□□□ 0.46
MRPL40-203ENST00000471259 SCAF11Q99590 1463 aaKnown RBP17.89■□□□□ 0.45
MRPL40-203ENST00000471259 TXNDC2Q86VQ3 553 aa17.87■□□□□ 0.45
MRPL40-203ENST00000471259 MYOM3Q5VTT5 1437 aa17.87■□□□□ 0.45
MRPL40-203ENST00000471259 DUOX2Q9NRD8 1548 aa17.87■□□□□ 0.45
MRPL40-203ENST00000471259 STAG3Q9UJ98 1225 aa17.86■□□□□ 0.45
MRPL40-203ENST00000471259 LRRC9Q6ZRR7 1453 aa17.86■□□□□ 0.45
MRPL40-203ENST00000471259 ARHGAP31Q2M1Z3 1444 aa17.85■□□□□ 0.45
MRPL40-203ENST00000471259 ALKQ9UM73 1620 aa17.85■□□□□ 0.45
MRPL40-203ENST00000471259 UBR1Q8IWV7 1749 aa17.84■□□□□ 0.45
MRPL40-203ENST00000471259 PIAS4Q8N2W9 510 aaPredicted RBP17.84■□□□□ 0.45
MRPL40-203ENST00000471259 SLIT1O75093 1534 aa17.83■□□□□ 0.45
MRPL40-203ENST00000471259 KANK1Q14678 1352 aa17.83■□□□□ 0.45
MRPL40-203ENST00000471259 STRCP1A6NGW2 1772 aa17.83■□□□□ 0.44
MRPL40-203ENST00000471259 VPS8Q8N3P4 1428 aa17.82■□□□□ 0.44
MRPL40-203ENST00000471259 CFAP65Q6ZU64 1925 aaKnown RBP17.82■□□□□ 0.44
MRPL40-203ENST00000471259 MAP3K1Q13233 1512 aa17.82■□□□□ 0.44
MRPL40-203ENST00000471259 ARHGAP23Q9P227 1491 aa17.82■□□□□ 0.44
MRPL40-203ENST00000471259 CEP152O94986 1710 aa17.81■□□□□ 0.44
MRPL40-203ENST00000471259 ERBINQ96RT1 1412 aa17.81■□□□□ 0.44
MRPL40-203ENST00000471259 FAM135BQ49AJ0 1406 aa17.8■□□□□ 0.44
MRPL40-203ENST00000471259 MROH1Q8NDA8 1641 aa17.79■□□□□ 0.44
MRPL40-203ENST00000471259 KIF15Q9NS87 1388 aa17.79■□□□□ 0.44
MRPL40-203ENST00000471259 LTKP29376 864 aa17.78■□□□□ 0.44
MRPL40-203ENST00000471259 PRDM15P57071 1507 aaPredicted RBP17.77■□□□□ 0.44
MRPL40-203ENST00000471259 APLP2Q06481 763 aa17.77■□□□□ 0.44
MRPL40-203ENST00000471259 TMEM2Q9UHN6 1383 aa17.77■□□□□ 0.43
MRPL40-203ENST00000471259 KDM5AP29375 1690 aaKnown RBP17.75■□□□□ 0.43
MRPL40-203ENST00000471259 KCNA6P17658 529 aa17.75■□□□□ 0.43
MRPL40-203ENST00000471259 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.75■□□□□ 0.43
MRPL40-203ENST00000471259 RRP7BPQ9NSQ0 103 aa17.74■□□□□ 0.43
MRPL40-203ENST00000471259 HDGFP51858 240 aaKnown RBP17.73■□□□□ 0.43
MRPL40-203ENST00000471259 PROSER2Q86WR7 435 aaPredicted RBP17.73■□□□□ 0.43
MRPL40-203ENST00000471259 EFCAB6Q5THR3 1501 aa17.72■□□□□ 0.43
MRPL40-203ENST00000471259 TMEM94Q12767 1356 aa17.72■□□□□ 0.43
MRPL40-203ENST00000471259 ANKRD30AQ9BXX3 1397 aa17.71■□□□□ 0.43
MRPL40-203ENST00000471259 SLC52A1Q9NWF4 448 aa17.71■□□□□ 0.43
MRPL40-203ENST00000471259 PIK3C2BO00750 1634 aa17.71■□□□□ 0.43
MRPL40-203ENST00000471259 KANK4Q5T7N3 995 aaPredicted RBP17.7■□□□□ 0.42
MRPL40-203ENST00000471259 BCANQ96GW7 911 aa17.7■□□□□ 0.42
MRPL40-203ENST00000471259 MSH6P52701 1360 aa17.69■□□□□ 0.42
MRPL40-203ENST00000471259 CROCC2H7BZ55 1655 aa17.69■□□□□ 0.42
MRPL40-203ENST00000471259 IDI1Q13907 227 aa17.69■□□□□ 0.42
MRPL40-203ENST00000471259 RGS17Q9UGC6 210 aaPredicted RBP17.69■□□□□ 0.42
MRPL40-203ENST00000471259 XIRP1Q702N8 1843 aaKnown RBP17.69■□□□□ 0.42
MRPL40-203ENST00000471259 LMTK2Q8IWU2 1503 aa17.68■□□□□ 0.42
MRPL40-203ENST00000471259 ABCC5O15440 1437 aa17.68■□□□□ 0.42
MRPL40-203ENST00000471259 NKTRP30414 1462 aaKnown RBP17.68■□□□□ 0.42
MRPL40-203ENST00000471259 PTPN23Q9H3S7 1636 aa17.67■□□□□ 0.42
MRPL40-203ENST00000471259 DAPK1P53355 1430 aa17.66■□□□□ 0.42
MRPL40-203ENST00000471259 SLC26A8Q96RN1 970 aa17.66■□□□□ 0.42
MRPL40-203ENST00000471259 ROBO1Q9Y6N7 1651 aa17.65■□□□□ 0.42
MRPL40-203ENST00000471259 SLAIN2Q9P270 581 aa17.63■□□□□ 0.41
MRPL40-203ENST00000471259 TET3O43151 1660 aa17.63■□□□□ 0.41
MRPL40-203ENST00000471259 JCADQ9P266 1359 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms