RNA–Protein interactions for RNA: ENST00000470743.4

SDHC-206, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 5

Gene SDHC, Length 832 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-206ENST00000470743 KIAA1107Q9UPP5 1409 aa15.26■□□□□ 0.03
SDHC-206ENST00000470743 RNF17Q9BXT8 1623 aaKnown RBP15.25■□□□□ 0.03
SDHC-206ENST00000470743 TNRQ92752 1358 aa15.24■□□□□ 0.03
SDHC-206ENST00000470743 DEPDC5O75140 1603 aa15.23■□□□□ 0.03
SDHC-206ENST00000470743 SYNMO15061 1565 aa15.23■□□□□ 0.03
SDHC-206ENST00000470743 IQGAP1P46940 1657 aa15.22■□□□□ 0.03
SDHC-206ENST00000470743 KDM5DQ9BY66 1539 aa15.22■□□□□ 0.03
SDHC-206ENST00000470743 SENP3Q9H4L4 574 aaPredicted RBP15.21■□□□□ 0.03
SDHC-206ENST00000470743 PZPP20742 1482 aa15.2■□□□□ 0.02
SDHC-206ENST00000470743 NPHP4O75161 1426 aaPredicted RBP15.2■□□□□ 0.02
SDHC-206ENST00000470743 CFDP1Q9UEE9 299 aaPredicted RBP15.2■□□□□ 0.02
SDHC-206ENST00000470743 FAM135AQ9P2D6 1515 aa15.2■□□□□ 0.02
SDHC-206ENST00000470743 STRCP1A6NGW2 1772 aa15.2■□□□□ 0.02
SDHC-206ENST00000470743 UGGT1Q9NYU2 1555 aa15.19■□□□□ 0.02
SDHC-206ENST00000470743 CCNB3Q8WWL7 1395 aa15.19■□□□□ 0.02
SDHC-206ENST00000470743 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.19■□□□□ 0.02
SDHC-206ENST00000470743 ANKLE2Q86XL3 938 aa15.18■□□□□ 0.02
SDHC-206ENST00000470743 MED14O60244 1454 aa15.18■□□□□ 0.02
SDHC-206ENST00000470743 NLRP1Q9C000 1473 aa15.17■□□□□ 0.02
SDHC-206ENST00000470743 FBXO31Q5XUX0 539 aaPredicted RBP15.16■□□□□ 0.02
SDHC-206ENST00000470743 LRRC7Q96NW7 1537 aa15.16■□□□□ 0.02
SDHC-206ENST00000470743 TIAM1Q13009 1591 aa15.15■□□□□ 0.02
SDHC-206ENST00000470743 THEMISQ8N1K5 641 aaPredicted RBP15.14■□□□□ 0.01
SDHC-206ENST00000470743 RTEL1-TNFRSF6BF6WH68 1400 aa15.14■□□□□ 0.01
SDHC-206ENST00000470743 DHX29Q7Z478 1369 aaKnown RBP15.13■□□□□ 0.01
SDHC-206ENST00000470743 MTUS2Q5JR59 1369 aa15.12■□□□□ 0.01
SDHC-206ENST00000470743 MIA2Q96PC5 1412 aa15.12■□□□□ 0.01
SDHC-206ENST00000470743 KIF3BO15066 747 aa15.12■□□□□ 0.01
SDHC-206ENST00000470743 MBD5Q9P267 1494 aa15.12■□□□□ 0.01
SDHC-206ENST00000470743 ZC3H13Q5T200 1668 aaKnown RBP15.12■□□□□ 0.01
SDHC-206ENST00000470743 ZNF644Q9H582 1327 aaPredicted RBP15.1■□□□□ 0.01
SDHC-206ENST00000470743 WASHC2CQ9Y4E1 1318 aa15.1■□□□□ 0.01
SDHC-206ENST00000470743 EHBP1L1Q8N3D4 1523 aa15.09■□□□□ 0.01
SDHC-206ENST00000470743 XIRP1Q702N8 1843 aaKnown RBP15.09■□□□□ 0.01
SDHC-206ENST00000470743 CCDC141Q6ZP82 1450 aa15.08■□□□□ 0.01
SDHC-206ENST00000470743 RGS17Q9UGC6 210 aaPredicted RBP15.08■□□□□ 0
SDHC-206ENST00000470743 SETD1AO15047 1707 aaKnown RBP15.07■□□□□ 0
SDHC-206ENST00000470743 UBR1Q8IWV7 1749 aa15.06■□□□□ 0
SDHC-206ENST00000470743 CAMSAP2Q08AD1 1489 aa15.04■□□□□ -0
SDHC-206ENST00000470743 ABCC3O15438 1527 aa15.03■□□□□ -0
SDHC-206ENST00000470743 SCAF11Q99590 1463 aaKnown RBP15.03■□□□□ -0
SDHC-206ENST00000470743 CEP152O94986 1710 aa15.03■□□□□ -0
SDHC-206ENST00000470743 ERVK-7P63135 1459 aa15.02■□□□□ -0
SDHC-206ENST00000470743 CFAP65Q6ZU64 1925 aaKnown RBP15.02□□□□□ -0.01
SDHC-206ENST00000470743 CEP162Q5TB80 1403 aa15□□□□□ -0.01
SDHC-206ENST00000470743 ROBO1Q9Y6N7 1651 aa15□□□□□ -0.01
SDHC-206ENST00000470743 EIF2AK4Q9P2K8 1649 aaKnown RBP15□□□□□ -0.01
SDHC-206ENST00000470743 ARHGEF5Q12774 1597 aa15□□□□□ -0.01
SDHC-206ENST00000470743 POTEAQ6S8J7 498 aa15□□□□□ -0.01
SDHC-206ENST00000470743 FAM135BQ49AJ0 1406 aa14.98□□□□□ -0.01
SDHC-206ENST00000470743 MROH1Q8NDA8 1641 aa14.97□□□□□ -0.01
SDHC-206ENST00000470743 SLIT1O75093 1534 aa14.97□□□□□ -0.01
SDHC-206ENST00000470743 NCOA2Q15596 1464 aa14.96□□□□□ -0.01
SDHC-206ENST00000470743 ARHGAP23Q9P227 1491 aa14.95□□□□□ -0.02
SDHC-206ENST00000470743 RSPH4AQ5TD94 716 aa14.94□□□□□ -0.02
SDHC-206ENST00000470743 PHLPP1O60346 1717 aa14.94□□□□□ -0.02
SDHC-206ENST00000470743 LRRC9Q6ZRR7 1453 aa14.94□□□□□ -0.02
SDHC-206ENST00000470743 MAST1Q9Y2H9 1570 aa14.94□□□□□ -0.02
SDHC-206ENST00000470743 MAP3K1Q13233 1512 aa14.92□□□□□ -0.02
SDHC-206ENST00000470743 PIK3C2BO00750 1634 aa14.92□□□□□ -0.02
SDHC-206ENST00000470743 TXNDC2Q86VQ3 553 aa14.92□□□□□ -0.02
SDHC-206ENST00000470743 TMEM94Q12767 1356 aa14.91□□□□□ -0.02
SDHC-206ENST00000470743 TSPY4P0CV99 314 aa14.91□□□□□ -0.02
SDHC-206ENST00000470743 TSPY10P0CW01 314 aa14.91□□□□□ -0.02
SDHC-206ENST00000470743 LTKP29376 864 aa14.91□□□□□ -0.02
SDHC-206ENST00000470743 EID1Q9Y6B2 187 aa14.9□□□□□ -0.02
SDHC-206ENST00000470743 KDM5AP29375 1690 aaKnown RBP14.88□□□□□ -0.03
SDHC-206ENST00000470743 PRDM15P57071 1507 aaPredicted RBP14.87□□□□□ -0.03
SDHC-206ENST00000470743 NWD1Q149M9 1564 aa14.86□□□□□ -0.03
SDHC-206ENST00000470743 NKTRP30414 1462 aaKnown RBP14.86□□□□□ -0.03
SDHC-206ENST00000470743 EFCAB6Q5THR3 1501 aa14.86□□□□□ -0.03
SDHC-206ENST00000470743 JCADQ9P266 1359 aa14.85□□□□□ -0.03
SDHC-206ENST00000470743 TMEM2Q9UHN6 1383 aa14.85□□□□□ -0.03
SDHC-206ENST00000470743 DUOX2Q9NRD8 1548 aa14.85□□□□□ -0.03
SDHC-206ENST00000470743 COL16A1Q07092 1604 aaPredicted RBP14.84□□□□□ -0.03
SDHC-206ENST00000470743 ARHGAP31Q2M1Z3 1444 aa14.84□□□□□ -0.03
SDHC-206ENST00000470743 PROSER2Q86WR7 435 aaPredicted RBP14.84□□□□□ -0.03
SDHC-206ENST00000470743 STAG3Q9UJ98 1225 aa14.83□□□□□ -0.04
SDHC-206ENST00000470743 MSH6P52701 1360 aa14.83□□□□□ -0.04
SDHC-206ENST00000470743 KCNA6P17658 529 aa14.82□□□□□ -0.04
SDHC-206ENST00000470743 RBM33Q96EV2 1170 aaKnown RBP14.82□□□□□ -0.04
SDHC-206ENST00000470743 TET3O43151 1660 aa14.81□□□□□ -0.04
SDHC-206ENST00000470743 UPF1Q92900 1129 aaKnown RBP eCLIP14.81□□□□□ -0.041e-13■□□□□ 11.2
SDHC-206ENST00000470743 LRP6O75581 1613 aa14.81□□□□□ -0.04
SDHC-206ENST00000470743 CROCC2H7BZ55 1655 aa14.81□□□□□ -0.04
SDHC-206ENST00000470743 TRIM52Q96A61 297 aa14.8□□□□□ -0.04
SDHC-206ENST00000470743 SHPRHQ149N8 1683 aa14.8□□□□□ -0.04
SDHC-206ENST00000470743 ADGRB3O60242 1522 aa14.79□□□□□ -0.04
SDHC-206ENST00000470743 MEX3CQ5U5Q3 659 aaKnown RBP14.79□□□□□ -0.04
SDHC-206ENST00000470743 SLC26A8Q96RN1 970 aa14.79□□□□□ -0.04
SDHC-206ENST00000470743 ERBINQ96RT1 1412 aa14.78□□□□□ -0.04
SDHC-206ENST00000470743 CHD2O14647 1828 aaKnown RBP14.78□□□□□ -0.04
SDHC-206ENST00000470743 KIF15Q9NS87 1388 aa14.77□□□□□ -0.04
SDHC-206ENST00000470743 ZNF772Q68DY9 489 aaPredicted RBP14.77□□□□□ -0.05
SDHC-206ENST00000470743 SLAIN2Q9P270 581 aa14.77□□□□□ -0.05
SDHC-206ENST00000470743 FGD6Q6ZV73 1430 aa14.76□□□□□ -0.05
SDHC-206ENST00000470743 SPATA31A6Q5VVP1 1343 aa14.76□□□□□ -0.05
SDHC-206ENST00000470743 KANK1Q14678 1352 aa14.75□□□□□ -0.05
SDHC-206ENST00000470743 MYOM3Q5VTT5 1437 aa14.75□□□□□ -0.05
SDHC-206ENST00000470743 AHDC1Q5TGY3 1603 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms