RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 GGT6Q6P531 493 aa18.97■□□□□ 0.63
SND1-209ENST00000470723 ACIN1Q9UKV3 1341 aaKnown RBP18.97■□□□□ 0.63
SND1-209ENST00000470723 ADAMTSL3P82987 1691 aa18.96■□□□□ 0.63
SND1-209ENST00000470723 MLECQ14165 292 aa18.96■□□□□ 0.63
SND1-209ENST00000470723 SETD5Q9C0A6 1442 aa18.94■□□□□ 0.62
SND1-209ENST00000470723 RNF17Q9BXT8 1623 aaKnown RBP18.94■□□□□ 0.62
SND1-209ENST00000470723 DEPDC5O75140 1603 aa18.92■□□□□ 0.62
SND1-209ENST00000470723 GCC2Q8IWJ2 1684 aa18.92■□□□□ 0.62
SND1-209ENST00000470723 FAM135AQ9P2D6 1515 aa18.91■□□□□ 0.62
SND1-209ENST00000470723 KDM5DQ9BY66 1539 aa18.9■□□□□ 0.62
SND1-209ENST00000470723 MROH1Q8NDA8 1641 aa18.9■□□□□ 0.62
SND1-209ENST00000470723 WASHC2CQ9Y4E1 1318 aa18.9■□□□□ 0.62
SND1-209ENST00000470723 CNTLNQ9NXG0 1405 aa18.9■□□□□ 0.62
SND1-209ENST00000470723 VWDEQ8N2E2 1590 aa18.89■□□□□ 0.61
SND1-209ENST00000470723 PRDM15P57071 1507 aaPredicted RBP18.87■□□□□ 0.61
SND1-209ENST00000470723 ZMYM3Q14202 1370 aa18.87■□□□□ 0.61
SND1-209ENST00000470723 KANK1Q14678 1352 aa18.87■□□□□ 0.61
SND1-209ENST00000470723 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.87■□□□□ 0.614e-7■□□□□ 8.7
SND1-209ENST00000470723 ESF1Q9H501 851 aaKnown RBP18.87■□□□□ 0.61
SND1-209ENST00000470723 UNC13BO14795 1591 aa18.85■□□□□ 0.61
SND1-209ENST00000470723 NUP155O75694 1391 aa18.85■□□□□ 0.61
SND1-209ENST00000470723 LMTK2Q8IWU2 1503 aa18.84■□□□□ 0.61
SND1-209ENST00000470723 RAB3GAP2Q9H2M9 1393 aa18.84■□□□□ 0.61
SND1-209ENST00000470723 MADDQ8WXG6 1647 aa18.84■□□□□ 0.61
SND1-209ENST00000470723 ABCC3O15438 1527 aa18.83■□□□□ 0.6
SND1-209ENST00000470723 FER1L4A9Z1Z3 1794 aa18.83■□□□□ 0.6
SND1-209ENST00000470723 ARHGAP31Q2M1Z3 1444 aa18.83■□□□□ 0.6
SND1-209ENST00000470723 PTPRMP28827 1452 aa18.82■□□□□ 0.6
SND1-209ENST00000470723 MROH2AA6NES4 1674 aa18.81■□□□□ 0.6
SND1-209ENST00000470723 ZC3H13Q5T200 1668 aaKnown RBP18.8■□□□□ 0.6
SND1-209ENST00000470723 LMTK3Q96Q04 1460 aa18.8■□□□□ 0.6
SND1-209ENST00000470723 TRIM52Q96A61 297 aa18.8■□□□□ 0.6
SND1-209ENST00000470723 CLTCQ00610 1675 aaKnown RBP18.79■□□□□ 0.6
SND1-209ENST00000470723 SETD1BQ9UPS6 1966 aaKnown RBP18.79■□□□□ 0.6
SND1-209ENST00000470723 IQGAP3Q86VI3 1631 aa18.78■□□□□ 0.6
SND1-209ENST00000470723 CEBPAP49715 358 aaPredicted RBP18.78■□□□□ 0.6
SND1-209ENST00000470723 PCGF6Q9BYE7 350 aa18.78■□□□□ 0.6
SND1-209ENST00000470723 RIMS1Q86UR5 1692 aaKnown RBP18.77■□□□□ 0.6
SND1-209ENST00000470723 MPHOSPH9Q99550 1183 aa18.77■□□□□ 0.6
SND1-209ENST00000470723 PZPP20742 1482 aa18.76■□□□□ 0.59
SND1-209ENST00000470723 NPATQ14207 1427 aa18.74■□□□□ 0.59
SND1-209ENST00000470723 CEP152O94986 1710 aa18.74■□□□□ 0.59
SND1-209ENST00000470723 TET3O43151 1660 aa18.74■□□□□ 0.59
SND1-209ENST00000470723 C3P01024 1663 aa18.74■□□□□ 0.59
SND1-209ENST00000470723 RPRD2Q5VT52 1461 aaKnown RBP18.74■□□□□ 0.59
SND1-209ENST00000470723 FBXO31Q5XUX0 539 aaPredicted RBP18.74■□□□□ 0.59
SND1-209ENST00000470723 SLC4A1APQ9BWU0 796 aaKnown RBP18.74■□□□□ 0.59
SND1-209ENST00000470723 CAMSAP1Q5T5Y3 1602 aa18.73■□□□□ 0.59
SND1-209ENST00000470723 EFCAB6Q5THR3 1501 aa18.71■□□□□ 0.59
SND1-209ENST00000470723 PKD2Q13563 968 aa18.71■□□□□ 0.59
SND1-209ENST00000470723 NOS1P29475 1434 aa18.7■□□□□ 0.58
SND1-209ENST00000470723 CFAP65Q6ZU64 1925 aaKnown RBP18.68■□□□□ 0.58
SND1-209ENST00000470723 PTPRTO14522 1441 aa18.68■□□□□ 0.58
SND1-209ENST00000470723 SPATA31D1Q6ZQQ2 1576 aa18.68■□□□□ 0.58
SND1-209ENST00000470723 E9PCH4 1651 aa18.67■□□□□ 0.58
SND1-209ENST00000470723 ERVK-7P63135 1459 aa18.66■□□□□ 0.58
SND1-209ENST00000470723 SLC52A1Q9NWF4 448 aa18.66■□□□□ 0.58
SND1-209ENST00000470723 TNRQ92752 1358 aa18.65■□□□□ 0.58
SND1-209ENST00000470723 SOCS7O14512 581 aa18.64■□□□□ 0.57
SND1-209ENST00000470723 PLA2R1Q13018 1463 aa18.64■□□□□ 0.57
SND1-209ENST00000470723 PREX1Q8TCU6 1659 aa18.63■□□□□ 0.57
SND1-209ENST00000470723 PLPPR3Q6T4P5 718 aa18.63■□□□□ 0.57
SND1-209ENST00000470723 IDI1Q13907 227 aa18.62■□□□□ 0.57
SND1-209ENST00000470723 DISP3Q9P2K9 1392 aa18.6■□□□□ 0.57
SND1-209ENST00000470723 FOXD1Q16676 465 aa18.6■□□□□ 0.57
SND1-209ENST00000470723 NLRP1Q9C000 1473 aa18.59■□□□□ 0.57
SND1-209ENST00000470723 ANKRD30BQ9BXX2 1392 aa18.59■□□□□ 0.57
SND1-209ENST00000470723 SYNMO15061 1565 aa18.58■□□□□ 0.56
SND1-209ENST00000470723 DHX57Q6P158 1386 aaKnown RBP18.56■□□□□ 0.56
SND1-209ENST00000470723 UHRF1BP1Q6BDS2 1440 aa18.56■□□□□ 0.56
SND1-209ENST00000470723 A2ML1A8K2U0 1454 aa18.55■□□□□ 0.56
SND1-209ENST00000470723 SPHKAPQ2M3C7 1700 aa18.54■□□□□ 0.56
SND1-209ENST00000470723 TRPM2O94759 1503 aa18.54■□□□□ 0.56
SND1-209ENST00000470723 PIK3C2BO00750 1634 aa18.54■□□□□ 0.56
SND1-209ENST00000470723 THEMISQ8N1K5 641 aaPredicted RBP18.54■□□□□ 0.56
SND1-209ENST00000470723 KDM5AP29375 1690 aaKnown RBP18.5■□□□□ 0.55
SND1-209ENST00000470723 MYO3AQ8NEV4 1616 aa18.5■□□□□ 0.55
SND1-209ENST00000470723 CEP170BQ9Y4F5 1589 aaPredicted RBP18.5■□□□□ 0.55
SND1-209ENST00000470723 ILDR2Q71H61 639 aa18.49■□□□□ 0.55
SND1-209ENST00000470723 ZNF142P52746 1687 aaPredicted RBP18.49■□□□□ 0.55
SND1-209ENST00000470723 CCDC144AA2RUR9 1427 aa18.48■□□□□ 0.55
SND1-209ENST00000470723 UGGT1Q9NYU2 1555 aa18.47■□□□□ 0.55
SND1-209ENST00000470723 CERKQ8TCT0 537 aa18.47■□□□□ 0.55
SND1-209ENST00000470723 TMEM131LA2VDJ0 1609 aa18.46■□□□□ 0.55
SND1-209ENST00000470723 CLTCL1P53675 1640 aa18.46■□□□□ 0.55
SND1-209ENST00000470723 UBR1Q8IWV7 1749 aa18.46■□□□□ 0.55
SND1-209ENST00000470723 STAG3Q9UJ98 1225 aa18.45■□□□□ 0.54
SND1-209ENST00000470723 NEURL4Q96JN8 1562 aa18.45■□□□□ 0.54
SND1-209ENST00000470723 CLSPNQ9HAW4 1339 aa18.45■□□□□ 0.54
SND1-209ENST00000470723 SPATA31E1Q6ZUB1 1445 aa18.44■□□□□ 0.54
SND1-209ENST00000470723 RPGRIP1LQ68CZ1 1315 aa18.44■□□□□ 0.54
SND1-209ENST00000470723 TMEM2Q9UHN6 1383 aa18.43■□□□□ 0.54
SND1-209ENST00000470723 HDGFP51858 240 aaKnown RBP18.43■□□□□ 0.54
SND1-209ENST00000470723 HSPA2P54652 639 aa18.43■□□□□ 0.54
SND1-209ENST00000470723 ARHGAP23Q9P227 1491 aa18.43■□□□□ 0.54
SND1-209ENST00000470723 ADGRB3O60242 1522 aa18.43■□□□□ 0.54
SND1-209ENST00000470723 SLIT1O75093 1534 aa18.43■□□□□ 0.54
SND1-209ENST00000470723 KIF1BO60333 1816 aa18.42■□□□□ 0.54
SND1-209ENST00000470723 CHGAP10645 457 aaKnown RBP18.41■□□□□ 0.54
SND1-209ENST00000470723 ANKLE2Q86XL3 938 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms