RNA–Protein interactions for RNA: ENST00000470542.5

CPA4-203, Transcript of carboxypeptidase A4, humanhuman

TSL 4

Gene CPA4, Length 546 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-203ENST00000470542 KIF3BO15066 747 aa17.05■□□□□ 0.32
CPA4-203ENST00000470542 POLR1AO95602 1720 aaPredicted RBP17.04■□□□□ 0.32
CPA4-203ENST00000470542 FBXO31Q5XUX0 539 aaPredicted RBP17.04■□□□□ 0.32
CPA4-203ENST00000470542 CEP162Q5TB80 1403 aa17.04■□□□□ 0.32
CPA4-203ENST00000470542 KDM5DQ9BY66 1539 aa17.03■□□□□ 0.32
CPA4-203ENST00000470542 PIP4K2BP78356 416 aa17.03■□□□□ 0.32
CPA4-203ENST00000470542 CCDC141Q6ZP82 1450 aa17.03■□□□□ 0.32
CPA4-203ENST00000470542 NEURL4Q96JN8 1562 aa17.02■□□□□ 0.31
CPA4-203ENST00000470542 WASHC2CQ9Y4E1 1318 aa17.01■□□□□ 0.31
CPA4-203ENST00000470542 PZPP20742 1482 aa17.01■□□□□ 0.31
CPA4-203ENST00000470542 CPS1P31327 1500 aa17.01■□□□□ 0.31
CPA4-203ENST00000470542 CAMSAP2Q08AD1 1489 aa17■□□□□ 0.31
CPA4-203ENST00000470542 SHANK2Q9UPX8 1470 aa16.99■□□□□ 0.31
CPA4-203ENST00000470542 TOM1O60784 492 aa16.99■□□□□ 0.31
CPA4-203ENST00000470542 HSPA1LP34931 641 aa16.99■□□□□ 0.31
CPA4-203ENST00000470542 NCOA2Q15596 1464 aa16.99■□□□□ 0.31
CPA4-203ENST00000470542 FAM135AQ9P2D6 1515 aa16.98■□□□□ 0.31
CPA4-203ENST00000470542 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.98■□□□□ 0.31
CPA4-203ENST00000470542 ANKLE2Q86XL3 938 aa16.97■□□□□ 0.31
CPA4-203ENST00000470542 THEMISQ8N1K5 641 aaPredicted RBP16.96■□□□□ 0.31
CPA4-203ENST00000470542 MED1Q15648 1581 aaPredicted RBP16.96■□□□□ 0.31
CPA4-203ENST00000470542 UGGT1Q9NYU2 1555 aa16.95■□□□□ 0.3
CPA4-203ENST00000470542 NLRP1Q9C000 1473 aa16.95■□□□□ 0.3
CPA4-203ENST00000470542 RSPH4AQ5TD94 716 aa16.95■□□□□ 0.3
CPA4-203ENST00000470542 MIA2Q96PC5 1412 aa16.95■□□□□ 0.3
CPA4-203ENST00000470542 NPHP4O75161 1426 aaPredicted RBP16.94■□□□□ 0.3
CPA4-203ENST00000470542 VWDEQ8N2E2 1590 aa16.94■□□□□ 0.3
CPA4-203ENST00000470542 TSPY4P0CV99 314 aa16.93■□□□□ 0.3
CPA4-203ENST00000470542 TSPY10P0CW01 314 aa16.93■□□□□ 0.3
CPA4-203ENST00000470542 ARHGEF5Q12774 1597 aa16.92■□□□□ 0.3
CPA4-203ENST00000470542 DEPDC5O75140 1603 aa16.91■□□□□ 0.3
CPA4-203ENST00000470542 SENP3Q9H4L4 574 aaPredicted RBP16.9■□□□□ 0.3
CPA4-203ENST00000470542 MED14O60244 1454 aa16.9■□□□□ 0.3
CPA4-203ENST00000470542 IQGAP1P46940 1657 aa16.9■□□□□ 0.3
CPA4-203ENST00000470542 ABCC3O15438 1527 aa16.88■□□□□ 0.29
CPA4-203ENST00000470542 PHF23Q9BUL5 403 aaPredicted RBP16.88■□□□□ 0.29
CPA4-203ENST00000470542 RNF17Q9BXT8 1623 aaKnown RBP16.88■□□□□ 0.29
CPA4-203ENST00000470542 ZC3H13Q5T200 1668 aaKnown RBP16.88■□□□□ 0.29
CPA4-203ENST00000470542 ALKQ9UM73 1620 aa16.85■□□□□ 0.29
CPA4-203ENST00000470542 ERVK-7P63135 1459 aa16.85■□□□□ 0.29
CPA4-203ENST00000470542 MAST1Q9Y2H9 1570 aa16.85■□□□□ 0.29
CPA4-203ENST00000470542 EIF2AK4Q9P2K8 1649 aaKnown RBP16.84■□□□□ 0.29
CPA4-203ENST00000470542 STRCP1A6NGW2 1772 aa16.83■□□□□ 0.28
CPA4-203ENST00000470542 SYNMO15061 1565 aa16.83■□□□□ 0.28
CPA4-203ENST00000470542 LRRC9Q6ZRR7 1453 aa16.83■□□□□ 0.28
CPA4-203ENST00000470542 LRRC7Q96NW7 1537 aa16.83■□□□□ 0.28
CPA4-203ENST00000470542 CEP152O94986 1710 aa16.82■□□□□ 0.28
CPA4-203ENST00000470542 MROH1Q8NDA8 1641 aa16.81■□□□□ 0.28
CPA4-203ENST00000470542 UBR1Q8IWV7 1749 aa16.8■□□□□ 0.28
CPA4-203ENST00000470542 VPS8Q8N3P4 1428 aa16.79■□□□□ 0.28
CPA4-203ENST00000470542 SCAF11Q99590 1463 aaKnown RBP16.78■□□□□ 0.28
CPA4-203ENST00000470542 DUOX2Q9NRD8 1548 aa16.77■□□□□ 0.28
CPA4-203ENST00000470542 CFAP65Q6ZU64 1925 aaKnown RBP16.76■□□□□ 0.27
CPA4-203ENST00000470542 MYOM3Q5VTT5 1437 aa16.76■□□□□ 0.27
CPA4-203ENST00000470542 KANK4Q5T7N3 995 aaPredicted RBP16.75■□□□□ 0.27
CPA4-203ENST00000470542 TXNDC2Q86VQ3 553 aa16.75■□□□□ 0.27
CPA4-203ENST00000470542 LTKP29376 864 aa16.73■□□□□ 0.27
CPA4-203ENST00000470542 EID1Q9Y6B2 187 aa16.73■□□□□ 0.27
CPA4-203ENST00000470542 KIF15Q9NS87 1388 aa16.73■□□□□ 0.27
CPA4-203ENST00000470542 ARHGAP23Q9P227 1491 aa16.73■□□□□ 0.27
CPA4-203ENST00000470542 SLIT1O75093 1534 aa16.72■□□□□ 0.27
CPA4-203ENST00000470542 PRDM15P57071 1507 aaPredicted RBP16.72■□□□□ 0.27
CPA4-203ENST00000470542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.72■□□□□ 0.27
CPA4-203ENST00000470542 RRP7BPQ9NSQ0 103 aa16.71■□□□□ 0.27
CPA4-203ENST00000470542 STAG3Q9UJ98 1225 aa16.71■□□□□ 0.27
CPA4-203ENST00000470542 ARHGAP31Q2M1Z3 1444 aa16.7■□□□□ 0.26
CPA4-203ENST00000470542 PIK3C2BO00750 1634 aa16.7■□□□□ 0.26
CPA4-203ENST00000470542 MAP3K1Q13233 1512 aa16.7■□□□□ 0.26
CPA4-203ENST00000470542 ERBINQ96RT1 1412 aa16.7■□□□□ 0.26
CPA4-203ENST00000470542 CROCC2H7BZ55 1655 aa16.69■□□□□ 0.26
CPA4-203ENST00000470542 XIRP1Q702N8 1843 aaKnown RBP16.68■□□□□ 0.26
CPA4-203ENST00000470542 KANK1Q14678 1352 aa16.68■□□□□ 0.26
CPA4-203ENST00000470542 LOC105371045A0A1W2PR82 267 aa16.68■□□□□ 0.26
CPA4-203ENST00000470542 ABCC5O15440 1437 aa16.67■□□□□ 0.26
CPA4-203ENST00000470542 TMEM2Q9UHN6 1383 aa16.66■□□□□ 0.26
CPA4-203ENST00000470542 PTPN23Q9H3S7 1636 aa16.66■□□□□ 0.26
CPA4-203ENST00000470542 EFCAB6Q5THR3 1501 aa16.65■□□□□ 0.26
CPA4-203ENST00000470542 RGS17Q9UGC6 210 aaPredicted RBP16.64■□□□□ 0.25
CPA4-203ENST00000470542 TMEM94Q12767 1356 aa16.64■□□□□ 0.25
CPA4-203ENST00000470542 DAPK1P53355 1430 aa16.63■□□□□ 0.25
CPA4-203ENST00000470542 RBM33Q96EV2 1170 aaKnown RBP16.62■□□□□ 0.25
CPA4-203ENST00000470542 SLC26A8Q96RN1 970 aa16.62■□□□□ 0.25
CPA4-203ENST00000470542 CHIC2Q9UKJ5 165 aa16.62■□□□□ 0.25
CPA4-203ENST00000470542 FAM135BQ49AJ0 1406 aa16.62■□□□□ 0.25
CPA4-203ENST00000470542 APLP2Q06481 763 aa16.61■□□□□ 0.25
CPA4-203ENST00000470542 IDI1Q13907 227 aa16.61■□□□□ 0.25
CPA4-203ENST00000470542 BCANQ96GW7 911 aa16.61■□□□□ 0.25
CPA4-203ENST00000470542 KDM5AP29375 1690 aaKnown RBP16.61■□□□□ 0.25
CPA4-203ENST00000470542 KCNA6P17658 529 aa16.6■□□□□ 0.25
CPA4-203ENST00000470542 PROSER2Q86WR7 435 aaPredicted RBP16.6■□□□□ 0.25
CPA4-203ENST00000470542 LMTK2Q8IWU2 1503 aa16.6■□□□□ 0.25
CPA4-203ENST00000470542 ROBO1Q9Y6N7 1651 aa16.59■□□□□ 0.25
CPA4-203ENST00000470542 ANKRD30AQ9BXX3 1397 aa16.59■□□□□ 0.25
CPA4-203ENST00000470542 FGD6Q6ZV73 1430 aa16.58■□□□□ 0.24
CPA4-203ENST00000470542 ADGRB3O60242 1522 aa16.58■□□□□ 0.24
CPA4-203ENST00000470542 TET3O43151 1660 aa16.57■□□□□ 0.24
CPA4-203ENST00000470542 POTEAQ6S8J7 498 aa16.56■□□□□ 0.24
CPA4-203ENST00000470542 NKTRP30414 1462 aaKnown RBP16.55■□□□□ 0.24
CPA4-203ENST00000470542 NOS1P29475 1434 aa16.54■□□□□ 0.24
CPA4-203ENST00000470542 MSH6P52701 1360 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms