RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-208ENST00000470463 FAM135AQ9P2D6 1515 aa15.73■□□□□ 0.11
SND1-208ENST00000470463 MLH3Q9UHC1 1453 aa15.73■□□□□ 0.11
SND1-208ENST00000470463 EIF2AK4Q9P2K8 1649 aaKnown RBP15.73■□□□□ 0.11
SND1-208ENST00000470463 FBXO41Q8TF61 875 aa15.72■□□□□ 0.11
SND1-208ENST00000470463 DHX29Q7Z478 1369 aaKnown RBP15.72■□□□□ 0.11
SND1-208ENST00000470463 IQGAP3Q86VI3 1631 aa15.72■□□□□ 0.11
SND1-208ENST00000470463 MYT1LQ9UL68 1186 aa15.7■□□□□ 0.1
SND1-208ENST00000470463 KANK1Q14678 1352 aa15.7■□□□□ 0.1
SND1-208ENST00000470463 HECW2Q9P2P5 1572 aa15.68■□□□□ 0.1
SND1-208ENST00000470463 DEPDC5O75140 1603 aa15.67■□□□□ 0.1
SND1-208ENST00000470463 DIEXFQ68CQ4 756 aaKnown RBP15.66■□□□□ 0.1
SND1-208ENST00000470463 KIDINS220Q9ULH0 1771 aa15.66■□□□□ 0.1
SND1-208ENST00000470463 PPRC1Q5VV67 1664 aaKnown RBP15.66■□□□□ 0.1
SND1-208ENST00000470463 ATP10AO60312 1499 aa15.65■□□□□ 0.1
SND1-208ENST00000470463 FOXD1Q16676 465 aa15.65■□□□□ 0.1
SND1-208ENST00000470463 A2MP01023 1474 aa15.65■□□□□ 0.1
SND1-208ENST00000470463 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.63■□□□□ 0.09
SND1-208ENST00000470463 PRDM15P57071 1507 aaPredicted RBP15.63■□□□□ 0.09
SND1-208ENST00000470463 CCDC144AA2RUR9 1427 aa15.62■□□□□ 0.09
SND1-208ENST00000470463 L3MBTL2Q969R5 705 aa15.62■□□□□ 0.09
SND1-208ENST00000470463 BCORL1Q5H9F3 1711 aa15.61■□□□□ 0.09
SND1-208ENST00000470463 VWDEQ8N2E2 1590 aa15.61■□□□□ 0.09
SND1-208ENST00000470463 KIF3BO15066 747 aa15.6■□□□□ 0.09
SND1-208ENST00000470463 RICTORQ6R327 1708 aa15.6■□□□□ 0.09
SND1-208ENST00000470463 ZMYM4Q5VZL5 1548 aa15.59■□□□□ 0.09
SND1-208ENST00000470463 RNF17Q9BXT8 1623 aaKnown RBP15.59■□□□□ 0.09
SND1-208ENST00000470463 TET3O43151 1660 aa15.59■□□□□ 0.09
SND1-208ENST00000470463 STAC3Q96MF2 364 aa15.58■□□□□ 0.08
SND1-208ENST00000470463 LMTK2Q8IWU2 1503 aa15.58■□□□□ 0.08
SND1-208ENST00000470463 UHRF1BP1Q6BDS2 1440 aa15.55■□□□□ 0.08
SND1-208ENST00000470463 ARID4BQ4LE39 1312 aaPredicted RBP15.55■□□□□ 0.08
SND1-208ENST00000470463 PTPRTO14522 1441 aa15.54■□□□□ 0.08
SND1-208ENST00000470463 RAPGEF3O95398 923 aa15.54■□□□□ 0.08
SND1-208ENST00000470463 ABCA6Q8N139 1617 aa15.54■□□□□ 0.08
SND1-208ENST00000470463 DIP2CQ9Y2E4 1556 aa15.53■□□□□ 0.08
SND1-208ENST00000470463 MROH1Q8NDA8 1641 aa15.53■□□□□ 0.08
SND1-208ENST00000470463 TRPM2O94759 1503 aa15.53■□□□□ 0.08
SND1-208ENST00000470463 EIF4G2P78344 907 aaKnown RBP eCLIP15.52■□□□□ 0.08
SND1-208ENST00000470463 PLA2R1Q13018 1463 aa15.52■□□□□ 0.07
SND1-208ENST00000470463 E9PCH4 1651 aa15.51■□□□□ 0.07
SND1-208ENST00000470463 FRMPD1Q5SYB0 1578 aa15.51■□□□□ 0.07
SND1-208ENST00000470463 NEURL4Q96JN8 1562 aa15.51■□□□□ 0.07
SND1-208ENST00000470463 REREQ9P2R6 1566 aa15.51■□□□□ 0.07
SND1-208ENST00000470463 PPP6R1Q9UPN7 881 aa15.51■□□□□ 0.07
SND1-208ENST00000470463 EFCAB6Q5THR3 1501 aa15.5■□□□□ 0.07
SND1-208ENST00000470463 PTPRMP28827 1452 aa15.49■□□□□ 0.07
SND1-208ENST00000470463 SPHKAPQ2M3C7 1700 aa15.48■□□□□ 0.07
SND1-208ENST00000470463 ZC3H13Q5T200 1668 aaKnown RBP15.48■□□□□ 0.07
SND1-208ENST00000470463 AGLP35573 1532 aa15.47■□□□□ 0.07
SND1-208ENST00000470463 RALGAPBQ86X10 1494 aa15.46■□□□□ 0.07
SND1-208ENST00000470463 WASHC2CQ9Y4E1 1318 aa15.46■□□□□ 0.07
SND1-208ENST00000470463 ARHGAP31Q2M1Z3 1444 aa15.45■□□□□ 0.06
SND1-208ENST00000470463 NBPF8Q3BBV2 869 aa15.45■□□□□ 0.06
SND1-208ENST00000470463 GGT6Q6P531 493 aa15.45■□□□□ 0.06
SND1-208ENST00000470463 DCAF11Q8TEB1 546 aa15.45■□□□□ 0.06
SND1-208ENST00000470463 CNTLNQ9NXG0 1405 aa15.44■□□□□ 0.06
SND1-208ENST00000470463 YEATS2Q9ULM3 1422 aa15.44■□□□□ 0.06
SND1-208ENST00000470463 CEP152O94986 1710 aa15.43■□□□□ 0.06
SND1-208ENST00000470463 ABCC3O15438 1527 aa15.43■□□□□ 0.06
SND1-208ENST00000470463 SPATA31E1Q6ZUB1 1445 aa15.43■□□□□ 0.06
SND1-208ENST00000470463 HSPA5P11021 654 aaKnown RBP15.41■□□□□ 0.06
SND1-208ENST00000470463 PRAG1Q86YV5 1406 aa15.41■□□□□ 0.06
SND1-208ENST00000470463 ARHGEF40Q8TER5 1519 aa15.39■□□□□ 0.05
SND1-208ENST00000470463 NPATQ14207 1427 aa15.39■□□□□ 0.05
SND1-208ENST00000470463 CLTCL1P53675 1640 aa15.39■□□□□ 0.05
SND1-208ENST00000470463 CAMSAP1Q5T5Y3 1602 aa15.39■□□□□ 0.05
SND1-208ENST00000470463 RGL3Q3MIN7 710 aa15.38■□□□□ 0.05
SND1-208ENST00000470463 ZNF326Q5BKZ1 582 aaKnown RBP15.38■□□□□ 0.05
SND1-208ENST00000470463 CERKQ8TCT0 537 aa15.38■□□□□ 0.05
SND1-208ENST00000470463 KDM2AQ9Y2K7 1162 aa15.38■□□□□ 0.05
SND1-208ENST00000470463 LAMC1P11047 1609 aa15.37■□□□□ 0.05
SND1-208ENST00000470463 CARD11Q9BXL7 1154 aa15.37■□□□□ 0.05
SND1-208ENST00000470463 KIF1BO60333 1816 aa15.37■□□□□ 0.05
SND1-208ENST00000470463 ROCK2O75116 1388 aaKnown RBP15.36■□□□□ 0.05
SND1-208ENST00000470463 GPRASP1Q5JY77 1395 aa15.36■□□□□ 0.05
SND1-208ENST00000470463 USP47Q96K76 1375 aa15.36■□□□□ 0.05
SND1-208ENST00000470463 NOS1P29475 1434 aa15.36■□□□□ 0.05
SND1-208ENST00000470463 HSPA2P54652 639 aa15.36■□□□□ 0.05
SND1-208ENST00000470463 PLPPR3Q6T4P5 718 aa15.36■□□□□ 0.05
SND1-208ENST00000470463 RPGRIP1LQ68CZ1 1315 aa15.36■□□□□ 0.05
SND1-208ENST00000470463 SLC52A1Q9NWF4 448 aa15.35■□□□□ 0.05
SND1-208ENST00000470463 TRPM1Q7Z4N2 1603 aa15.35■□□□□ 0.05
SND1-208ENST00000470463 ADAMTSL3P82987 1691 aa15.35■□□□□ 0.05
SND1-208ENST00000470463 DMRT2Q9Y5R5 561 aa15.34■□□□□ 0.05
SND1-208ENST00000470463 MYOM2P54296 1465 aa15.33■□□□□ 0.05
SND1-208ENST00000470463 LMTK3Q96Q04 1460 aa15.33■□□□□ 0.04
SND1-208ENST00000470463 SLC24A1O60721 1099 aa15.32■□□□□ 0.04
SND1-208ENST00000470463 DDX10Q13206 875 aaKnown RBP15.32■□□□□ 0.04
SND1-208ENST00000470463 MIER1Q8N108 512 aa15.32■□□□□ 0.04
SND1-208ENST00000470463 ADGRB3O60242 1522 aa15.32■□□□□ 0.04
SND1-208ENST00000470463 POLR1AO95602 1720 aaPredicted RBP15.31■□□□□ 0.04
SND1-208ENST00000470463 MLECQ14165 292 aa15.3■□□□□ 0.04
SND1-208ENST00000470463 HIRIP3Q9BW71 556 aaPredicted RBP15.3■□□□□ 0.04
SND1-208ENST00000470463 KIAA1210Q9ULL0 1709 aa15.3■□□□□ 0.04
SND1-208ENST00000470463 CCDC7Q96M83 1385 aa15.29■□□□□ 0.04
SND1-208ENST00000470463 ESF1Q9H501 851 aaKnown RBP15.29■□□□□ 0.04
SND1-208ENST00000470463 PIK3C2BO00750 1634 aa15.28■□□□□ 0.04
SND1-208ENST00000470463 MADDQ8WXG6 1647 aa15.28■□□□□ 0.04
SND1-208ENST00000470463 WASHC2AQ641Q2 1341 aa15.28■□□□□ 0.04
SND1-208ENST00000470463 ANP32CO43423 234 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms