RNA–Protein interactions for RNA: ENST00000470396.1

PSMD4-210, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 1 (best)

Gene PSMD4, Length 338 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-210ENST00000470396 RRP7BPQ9NSQ0 103 aa10.53□□□□□ -0.72
PSMD4-210ENST00000470396 EIF2AK4Q9P2K8 1649 aaKnown RBP10.53□□□□□ -0.72
PSMD4-210ENST00000470396 CLTCQ00610 1675 aaKnown RBP10.53□□□□□ -0.72
PSMD4-210ENST00000470396 KIF3BO15066 747 aa10.52□□□□□ -0.73
PSMD4-210ENST00000470396 GGT6Q6P531 493 aa10.52□□□□□ -0.73
PSMD4-210ENST00000470396 MROH2AA6NES4 1674 aa10.52□□□□□ -0.73
PSMD4-210ENST00000470396 ERBINQ96RT1 1412 aa10.51□□□□□ -0.73
PSMD4-210ENST00000470396 ANKRD30AQ9BXX3 1397 aa10.51□□□□□ -0.73
PSMD4-210ENST00000470396 CNTLNQ9NXG0 1405 aa10.5□□□□□ -0.73
PSMD4-210ENST00000470396 PLPPR3Q6T4P5 718 aa10.5□□□□□ -0.73
PSMD4-210ENST00000470396 DEPDC5O75140 1603 aa10.5□□□□□ -0.73
PSMD4-210ENST00000470396 ABCC3O15438 1527 aa10.49□□□□□ -0.73
PSMD4-210ENST00000470396 PRDM15P57071 1507 aaPredicted RBP10.49□□□□□ -0.73
PSMD4-210ENST00000470396 KDM5DQ9BY66 1539 aa10.49□□□□□ -0.73
PSMD4-210ENST00000470396 ZMYM3Q14202 1370 aa10.49□□□□□ -0.73
PSMD4-210ENST00000470396 PPP6R1Q9UPN7 881 aa10.48□□□□□ -0.73
PSMD4-210ENST00000470396 ROCK1Q13464 1354 aa10.48□□□□□ -0.73
PSMD4-210ENST00000470396 FAM135AQ9P2D6 1515 aa10.48□□□□□ -0.73
PSMD4-210ENST00000470396 VWDEQ8N2E2 1590 aa10.48□□□□□ -0.73
PSMD4-210ENST00000470396 SETD1BQ9UPS6 1966 aaKnown RBP10.47□□□□□ -0.73
PSMD4-210ENST00000470396 ITGAEP38570 1179 aa10.47□□□□□ -0.73
PSMD4-210ENST00000470396 CEP152O94986 1710 aa10.47□□□□□ -0.73
PSMD4-210ENST00000470396 ANKRD50Q9ULJ7 1429 aa10.46□□□□□ -0.74
PSMD4-210ENST00000470396 PREX1Q8TCU6 1659 aa10.46□□□□□ -0.74
PSMD4-210ENST00000470396 ZC3H13Q5T200 1668 aaKnown RBP10.45□□□□□ -0.74
PSMD4-210ENST00000470396 PZPP20742 1482 aa10.45□□□□□ -0.74
PSMD4-210ENST00000470396 NPATQ14207 1427 aa10.45□□□□□ -0.74
PSMD4-210ENST00000470396 WASHC2CQ9Y4E1 1318 aa10.45□□□□□ -0.74
PSMD4-210ENST00000470396 ESF1Q9H501 851 aaKnown RBP10.45□□□□□ -0.74
PSMD4-210ENST00000470396 FBXO31Q5XUX0 539 aaPredicted RBP10.44□□□□□ -0.74
PSMD4-210ENST00000470396 CAMSAP1Q5T5Y3 1602 aa10.44□□□□□ -0.74
PSMD4-210ENST00000470396 UNC13BO14795 1591 aa10.43□□□□□ -0.74
PSMD4-210ENST00000470396 LMTK2Q8IWU2 1503 aa10.43□□□□□ -0.74
PSMD4-210ENST00000470396 NAIPQ13075 1403 aa10.42□□□□□ -0.74
PSMD4-210ENST00000470396 HSPA2P54652 639 aa10.42□□□□□ -0.74
PSMD4-210ENST00000470396 MYO3AQ8NEV4 1616 aa10.42□□□□□ -0.74
PSMD4-210ENST00000470396 GCC2Q8IWJ2 1684 aa10.41□□□□□ -0.74
PSMD4-210ENST00000470396 CFAP65Q6ZU64 1925 aaKnown RBP10.41□□□□□ -0.74
PSMD4-210ENST00000470396 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.41□□□□□ -0.74
PSMD4-210ENST00000470396 HFM1A2PYH4 1435 aa10.41□□□□□ -0.74
PSMD4-210ENST00000470396 UHRF1BP1Q6BDS2 1440 aa10.41□□□□□ -0.74
PSMD4-210ENST00000470396 ZNF142P52746 1687 aaPredicted RBP10.41□□□□□ -0.74
PSMD4-210ENST00000470396 DISP3Q9P2K9 1392 aa10.4□□□□□ -0.74
PSMD4-210ENST00000470396 SPATA31D1Q6ZQQ2 1576 aa10.4□□□□□ -0.74
PSMD4-210ENST00000470396 EFCAB6Q5THR3 1501 aa10.4□□□□□ -0.74
PSMD4-210ENST00000470396 CERKQ8TCT0 537 aa10.4□□□□□ -0.74
PSMD4-210ENST00000470396 ERVK-7P63135 1459 aa10.4□□□□□ -0.74
PSMD4-210ENST00000470396 ARHGAP31Q2M1Z3 1444 aa10.4□□□□□ -0.75
PSMD4-210ENST00000470396 STRCQ7RTU9 1775 aa10.39□□□□□ -0.75
PSMD4-210ENST00000470396 CEP170BQ9Y4F5 1589 aaPredicted RBP10.39□□□□□ -0.75
PSMD4-210ENST00000470396 TNRQ92752 1358 aa10.39□□□□□ -0.75
PSMD4-210ENST00000470396 IQGAP3Q86VI3 1631 aa10.38□□□□□ -0.75
PSMD4-210ENST00000470396 TET3O43151 1660 aa10.38□□□□□ -0.75
PSMD4-210ENST00000470396 KANK1Q14678 1352 aa10.37□□□□□ -0.75
PSMD4-210ENST00000470396 A2ML1A8K2U0 1454 aa10.36□□□□□ -0.75
PSMD4-210ENST00000470396 SYNMO15061 1565 aa10.36□□□□□ -0.75
PSMD4-210ENST00000470396 E9PCH4 1651 aa10.36□□□□□ -0.75
PSMD4-210ENST00000470396 NOS1P29475 1434 aa10.35□□□□□ -0.75
PSMD4-210ENST00000470396 NUP155O75694 1391 aa10.35□□□□□ -0.75
PSMD4-210ENST00000470396 NLRP1Q9C000 1473 aa10.35□□□□□ -0.75
PSMD4-210ENST00000470396 RPRD2Q5VT52 1461 aaKnown RBP10.33□□□□□ -0.76
PSMD4-210ENST00000470396 UBR1Q8IWV7 1749 aa10.32□□□□□ -0.76
PSMD4-210ENST00000470396 UGGT1Q9NYU2 1555 aa10.31□□□□□ -0.76
PSMD4-210ENST00000470396 PLA2R1Q13018 1463 aa10.31□□□□□ -0.76
PSMD4-210ENST00000470396 PIK3C2BO00750 1634 aa10.31□□□□□ -0.76
PSMD4-210ENST00000470396 NEURL4Q96JN8 1562 aa10.31□□□□□ -0.76
PSMD4-210ENST00000470396 IDI1Q13907 227 aa10.29□□□□□ -0.76
PSMD4-210ENST00000470396 NCKAP5LQ9HCH0 1330 aa10.29□□□□□ -0.76
PSMD4-210ENST00000470396 PTPRTO14522 1441 aa10.28□□□□□ -0.76
PSMD4-210ENST00000470396 SETD5Q9C0A6 1442 aa10.28□□□□□ -0.76
PSMD4-210ENST00000470396 ARHGAP23Q9P227 1491 aa10.28□□□□□ -0.76
PSMD4-210ENST00000470396 MYO5BQ9ULV0 1848 aa10.28□□□□□ -0.76
PSMD4-210ENST00000470396 KDM5AP29375 1690 aaKnown RBP10.28□□□□□ -0.76
PSMD4-210ENST00000470396 RAB3GAP2Q9H2M9 1393 aa10.27□□□□□ -0.76
PSMD4-210ENST00000470396 POLR1AO95602 1720 aaPredicted RBP10.27□□□□□ -0.76
PSMD4-210ENST00000470396 SPHKAPQ2M3C7 1700 aa10.27□□□□□ -0.76
PSMD4-210ENST00000470396 ADGRB3O60242 1522 aa10.27□□□□□ -0.77
PSMD4-210ENST00000470396 SLIT1O75093 1534 aa10.27□□□□□ -0.77
PSMD4-210ENST00000470396 TMEM131LA2VDJ0 1609 aa10.25□□□□□ -0.77
PSMD4-210ENST00000470396 LTKP29376 864 aa10.25□□□□□ -0.77
PSMD4-210ENST00000470396 THEMISQ8N1K5 641 aaPredicted RBP10.25□□□□□ -0.77
PSMD4-210ENST00000470396 TRIM52Q96A61 297 aa10.25□□□□□ -0.77
PSMD4-210ENST00000470396 SLC52A1Q9NWF4 448 aa10.25□□□□□ -0.77
PSMD4-210ENST00000470396 CLTCL1P53675 1640 aa10.25□□□□□ -0.77
PSMD4-210ENST00000470396 MED14O60244 1454 aa10.24□□□□□ -0.77
PSMD4-210ENST00000470396 TRPM2O94759 1503 aa10.24□□□□□ -0.77
PSMD4-210ENST00000470396 PKD2Q13563 968 aa10.24□□□□□ -0.77
PSMD4-210ENST00000470396 FOXD1Q16676 465 aa10.24□□□□□ -0.77
PSMD4-210ENST00000470396 TMEM2Q9UHN6 1383 aa10.24□□□□□ -0.77
PSMD4-210ENST00000470396 ZFYVE9O95405 1425 aa10.24□□□□□ -0.77
PSMD4-210ENST00000470396 SLC4A1APQ9BWU0 796 aaKnown RBP10.23□□□□□ -0.77
PSMD4-210ENST00000470396 SCAF11Q99590 1463 aaKnown RBP10.23□□□□□ -0.77
PSMD4-210ENST00000470396 LTBP4Q8N2S1 1624 aa10.22□□□□□ -0.77
PSMD4-210ENST00000470396 IQGAP1P46940 1657 aa10.22□□□□□ -0.77
PSMD4-210ENST00000470396 ANKLE2Q86XL3 938 aa10.21□□□□□ -0.77
PSMD4-210ENST00000470396 MPHOSPH9Q99550 1183 aa10.21□□□□□ -0.77
PSMD4-210ENST00000470396 DMRT2Q9Y5R5 561 aa10.21□□□□□ -0.77
PSMD4-210ENST00000470396 NPHP4O75161 1426 aaPredicted RBP10.21□□□□□ -0.78
PSMD4-210ENST00000470396 ZNF335Q9H4Z2 1342 aaPredicted RBP10.19□□□□□ -0.78
PSMD4-210ENST00000470396 TXNDC2Q86VQ3 553 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms