RNA–Protein interactions for RNA: ENST00000470279.1

STRC-208, Transcript of stereocilin, humanhuman

TSL 4

Gene STRC, Length 569 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-208ENST00000470279 CFDP1Q9UEE9 299 aaPredicted RBP23.51■■□□□ 1.35
STRC-208ENST00000470279 TNRQ92752 1358 aa23.5■■□□□ 1.35
STRC-208ENST00000470279 CCNB3Q8WWL7 1395 aa23.48■■□□□ 1.35
STRC-208ENST00000470279 PZPP20742 1482 aa23.46■■□□□ 1.35
STRC-208ENST00000470279 FBXO31Q5XUX0 539 aaPredicted RBP23.45■■□□□ 1.34
STRC-208ENST00000470279 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.43■■□□□ 1.34
STRC-208ENST00000470279 DEPDC5O75140 1603 aa23.43■■□□□ 1.34
STRC-208ENST00000470279 KDM5DQ9BY66 1539 aa23.43■■□□□ 1.34
STRC-208ENST00000470279 FAM135AQ9P2D6 1515 aa23.43■■□□□ 1.34
STRC-208ENST00000470279 MBD5Q9P267 1494 aa23.43■■□□□ 1.34
STRC-208ENST00000470279 DHX29Q7Z478 1369 aaKnown RBP23.42■■□□□ 1.34
STRC-208ENST00000470279 ANKLE2Q86XL3 938 aa23.42■■□□□ 1.34
STRC-208ENST00000470279 MED14O60244 1454 aa23.42■■□□□ 1.34
STRC-208ENST00000470279 RTEL1-TNFRSF6BF6WH68 1400 aa23.42■■□□□ 1.34
STRC-208ENST00000470279 NPHP4O75161 1426 aaPredicted RBP23.41■■□□□ 1.34
STRC-208ENST00000470279 TIAM1Q13009 1591 aa23.4■■□□□ 1.34
STRC-208ENST00000470279 ZNF644Q9H582 1327 aaPredicted RBP23.4■■□□□ 1.34
STRC-208ENST00000470279 STRCP1A6NGW2 1772 aa23.4■■□□□ 1.34
STRC-208ENST00000470279 IQGAP1P46940 1657 aa23.39■■□□□ 1.34
STRC-208ENST00000470279 UGGT1Q9NYU2 1555 aa23.39■■□□□ 1.33
STRC-208ENST00000470279 NLRP1Q9C000 1473 aa23.38■■□□□ 1.33
STRC-208ENST00000470279 RNF17Q9BXT8 1623 aaKnown RBP23.37■■□□□ 1.33
STRC-208ENST00000470279 MIA2Q96PC5 1412 aa23.36■■□□□ 1.33
STRC-208ENST00000470279 THEMISQ8N1K5 641 aaPredicted RBP23.36■■□□□ 1.33
STRC-208ENST00000470279 MTUS2Q5JR59 1369 aa23.36■■□□□ 1.33
STRC-208ENST00000470279 SYNMO15061 1565 aa23.35■■□□□ 1.33
STRC-208ENST00000470279 LRRC7Q96NW7 1537 aa23.35■■□□□ 1.33
STRC-208ENST00000470279 KIF3BO15066 747 aa23.35■■□□□ 1.33
STRC-208ENST00000470279 SENP3Q9H4L4 574 aaPredicted RBP23.34■■□□□ 1.33
STRC-208ENST00000470279 WASHC2CQ9Y4E1 1318 aa23.32■■□□□ 1.32
STRC-208ENST00000470279 EHBP1L1Q8N3D4 1523 aa23.29■■□□□ 1.32
STRC-208ENST00000470279 CCDC141Q6ZP82 1450 aa23.29■■□□□ 1.32
STRC-208ENST00000470279 CHIC1Q5VXU3 224 aa23.28■■□□□ 1.32
STRC-208ENST00000470279 RGS17Q9UGC6 210 aaPredicted RBP23.28■■□□□ 1.32
STRC-208ENST00000470279 ZC3H13Q5T200 1668 aaKnown RBP23.26■■□□□ 1.31
STRC-208ENST00000470279 CEP162Q5TB80 1403 aa23.25■■□□□ 1.31
STRC-208ENST00000470279 CAMSAP2Q08AD1 1489 aa23.23■■□□□ 1.31
STRC-208ENST00000470279 XIRP1Q702N8 1843 aaKnown RBP23.2■■□□□ 1.3
STRC-208ENST00000470279 ABCC3O15438 1527 aa23.2■■□□□ 1.3
STRC-208ENST00000470279 ERVK-7P63135 1459 aa23.18■■□□□ 1.3
STRC-208ENST00000470279 UBR1Q8IWV7 1749 aa23.18■■□□□ 1.3
STRC-208ENST00000470279 ARHGEF5Q12774 1597 aa23.16■■□□□ 1.3
STRC-208ENST00000470279 RSPH4AQ5TD94 716 aa23.16■■□□□ 1.3
STRC-208ENST00000470279 SCAF11Q99590 1463 aaKnown RBP23.16■■□□□ 1.3
STRC-208ENST00000470279 NCOA2Q15596 1464 aa23.13■■□□□ 1.29
STRC-208ENST00000470279 POTEAQ6S8J7 498 aa23.11■■□□□ 1.29
STRC-208ENST00000470279 CFAP65Q6ZU64 1925 aaKnown RBP23.11■■□□□ 1.29
STRC-208ENST00000470279 MROH1Q8NDA8 1641 aa23.11■■□□□ 1.29
STRC-208ENST00000470279 ARHGAP23Q9P227 1491 aa23.11■■□□□ 1.29
STRC-208ENST00000470279 CEP152O94986 1710 aa23.11■■□□□ 1.29
STRC-208ENST00000470279 EIF2AK4Q9P2K8 1649 aaKnown RBP23.1■■□□□ 1.29
STRC-208ENST00000470279 FAM135BQ49AJ0 1406 aa23.09■■□□□ 1.29
STRC-208ENST00000470279 SLIT1O75093 1534 aa23.09■■□□□ 1.29
STRC-208ENST00000470279 LTKP29376 864 aa23.08■■□□□ 1.29
STRC-208ENST00000470279 MAST1Q9Y2H9 1570 aa23.07■■□□□ 1.28
STRC-208ENST00000470279 TSPY4P0CV99 314 aa23.07■■□□□ 1.28
STRC-208ENST00000470279 TSPY10P0CW01 314 aa23.07■■□□□ 1.28
STRC-208ENST00000470279 SETD1AO15047 1707 aaKnown RBP23.05■■□□□ 1.28
STRC-208ENST00000470279 TXNDC2Q86VQ3 553 aa23.04■■□□□ 1.28
STRC-208ENST00000470279 ROBO1Q9Y6N7 1651 aa23.03■■□□□ 1.28
STRC-208ENST00000470279 TMEM94Q12767 1356 aa23■■□□□ 1.27
STRC-208ENST00000470279 MAP3K1Q13233 1512 aa22.99■■□□□ 1.27
STRC-208ENST00000470279 PIK3C2BO00750 1634 aa22.98■■□□□ 1.27
STRC-208ENST00000470279 EID1Q9Y6B2 187 aa22.97■■□□□ 1.27
STRC-208ENST00000470279 ARHGAP31Q2M1Z3 1444 aa22.96■■□□□ 1.27
STRC-208ENST00000470279 LRRC9Q6ZRR7 1453 aa22.95■■□□□ 1.26
STRC-208ENST00000470279 PRDM15P57071 1507 aaPredicted RBP22.94■■□□□ 1.26
STRC-208ENST00000470279 TMEM2Q9UHN6 1383 aa22.94■■□□□ 1.26
STRC-208ENST00000470279 DUOX2Q9NRD8 1548 aa22.93■■□□□ 1.26
STRC-208ENST00000470279 KCNA6P17658 529 aa22.91■■□□□ 1.26
STRC-208ENST00000470279 PHLPP1O60346 1717 aa22.91■■□□□ 1.26
STRC-208ENST00000470279 KDM5AP29375 1690 aaKnown RBP22.9■■□□□ 1.26
STRC-208ENST00000470279 TET3O43151 1660 aa22.9■■□□□ 1.26
STRC-208ENST00000470279 NWD1Q149M9 1564 aa22.89■■□□□ 1.26
STRC-208ENST00000470279 EFCAB6Q5THR3 1501 aa22.89■■□□□ 1.26
STRC-208ENST00000470279 NKTRP30414 1462 aaKnown RBP22.88■■□□□ 1.25
STRC-208ENST00000470279 PROSER2Q86WR7 435 aaPredicted RBP22.88■■□□□ 1.25
STRC-208ENST00000470279 RBM33Q96EV2 1170 aaKnown RBP22.88■■□□□ 1.25
STRC-208ENST00000470279 JCADQ9P266 1359 aa22.86■■□□□ 1.25
STRC-208ENST00000470279 SLC26A8Q96RN1 970 aa22.85■■□□□ 1.25
STRC-208ENST00000470279 ERBINQ96RT1 1412 aa22.84■■□□□ 1.25
STRC-208ENST00000470279 STAG3Q9UJ98 1225 aa22.84■■□□□ 1.25
STRC-208ENST00000470279 KIF15Q9NS87 1388 aa22.83■■□□□ 1.25
STRC-208ENST00000470279 COL16A1Q07092 1604 aaPredicted RBP22.82■■□□□ 1.24
STRC-208ENST00000470279 MSH6P52701 1360 aa22.82■■□□□ 1.24
STRC-208ENST00000470279 MYOM3Q5VTT5 1437 aa22.82■■□□□ 1.24
STRC-208ENST00000470279 CROCC2H7BZ55 1655 aa22.81■■□□□ 1.24
STRC-208ENST00000470279 LRP6O75581 1613 aa22.8■■□□□ 1.24
STRC-208ENST00000470279 SLAIN2Q9P270 581 aa22.8■■□□□ 1.24
STRC-208ENST00000470279 IDI1Q13907 227 aa22.79■■□□□ 1.24
STRC-208ENST00000470279 UPF1Q92900 1129 aaKnown RBP eCLIP22.79■■□□□ 1.24
STRC-208ENST00000470279 ADGRB3O60242 1522 aa22.78■■□□□ 1.24
STRC-208ENST00000470279 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.78■■□□□ 1.24
STRC-208ENST00000470279 LMTK2Q8IWU2 1503 aa22.77■■□□□ 1.24
STRC-208ENST00000470279 KANK1Q14678 1352 aa22.76■■□□□ 1.23
STRC-208ENST00000470279 CHD2O14647 1828 aaKnown RBP22.75■■□□□ 1.23
STRC-208ENST00000470279 RRP7BPQ9NSQ0 103 aa22.74■■□□□ 1.23
STRC-208ENST00000470279 FGD6Q6ZV73 1430 aa22.74■■□□□ 1.23
STRC-208ENST00000470279 ABCC5O15440 1437 aa22.73■■□□□ 1.23
STRC-208ENST00000470279 NOS1P29475 1434 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms