RNA–Protein interactions for RNA: ENST00000470243.5

SRRM1-208, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-208ENST00000470243 RBM26Q5T8P6 1007 aaKnown RBP8.95□□□□□ -0.98
SRRM1-208ENST00000470243 SPDYE16A6NNV3 312 aaPredicted RBP8.94□□□□□ -0.98
SRRM1-208ENST00000470243 PPP4R3BQ5MIZ7 849 aa8.94□□□□□ -0.98
SRRM1-208ENST00000470243 KCNK17Q96T54 332 aa8.93□□□□□ -0.98
SRRM1-208ENST00000470243 PTPN5P54829 565 aa8.92□□□□□ -0.98
SRRM1-208ENST00000470243 MAP3K9P80192 1104 aa8.91□□□□□ -0.98
SRRM1-208ENST00000470243 GPIHBP1Q8IV16 184 aa8.9□□□□□ -0.98
SRRM1-208ENST00000470243 OXER1Q8TDS5 423 aa8.9□□□□□ -0.98
SRRM1-208ENST00000470243 TBC1D12O60347 775 aa8.89□□□□□ -0.99
SRRM1-208ENST00000470243 SLC24A3Q9HC58 644 aa8.89□□□□□ -0.99
SRRM1-208ENST00000470243 ZMYND10O75800 440 aa8.88□□□□□ -0.99
SRRM1-208ENST00000470243 KCNH8Q96L42 1107 aa8.87□□□□□ -0.99
SRRM1-208ENST00000470243 GRXCR2A6NFK2 248 aa8.86□□□□□ -0.99
SRRM1-208ENST00000470243 VPS9D1Q9Y2B5 631 aa8.86□□□□□ -0.99
SRRM1-208ENST00000470243 BRPF1P55201 1214 aaPredicted RBP8.84□□□□□ -0.99
SRRM1-208ENST00000470243 BARGINQ6ZT62 677 aa8.84□□□□□ -0.99
SRRM1-208ENST00000470243 ZNF454Q8N9F8 522 aa8.84□□□□□ -0.99
SRRM1-208ENST00000470243 DDX12PQ92771 950 aa8.84□□□□□ -0.99
SRRM1-208ENST00000470243 EVI5O60447 810 aa8.83□□□□□ -1
SRRM1-208ENST00000470243 GPR37O15354 613 aa8.82□□□□□ -1
SRRM1-208ENST00000470243 OSBPP22059 807 aa8.81□□□□□ -1
SRRM1-208ENST00000470243 NEUROD2Q15784 382 aa8.8□□□□□ -1
SRRM1-208ENST00000470243 PRIM1P49642 420 aaKnown RBP8.79□□□□□ -1
SRRM1-208ENST00000470243 NUTM2FA1L443 756 aa8.78□□□□□ -1
SRRM1-208ENST00000470243 GOLGA8CPA6NN73 597 aa8.78□□□□□ -1
SRRM1-208ENST00000470243 THSD4Q6ZMP0 1018 aa8.78□□□□□ -1
SRRM1-208ENST00000470243 BCL2L12Q9HB09 334 aa8.78□□□□□ -1
SRRM1-208ENST00000470243 KRI1Q8N9T8 703 aaKnown RBP8.77□□□□□ -1.01
SRRM1-208ENST00000470243 BHMG1C9JSJ3 638 aaPredicted RBP8.76□□□□□ -1.01
SRRM1-208ENST00000470243 WNT2BQ93097 391 aa8.76□□□□□ -1.01
SRRM1-208ENST00000470243 IRX2Q9BZI1 471 aaPredicted RBP8.76□□□□□ -1.01
SRRM1-208ENST00000470243 PTPREP23469 700 aa8.75□□□□□ -1.01
SRRM1-208ENST00000470243 FOSBP53539 338 aa8.75□□□□□ -1.01
SRRM1-208ENST00000470243 MRPL50Q8N5N7 158 aaKnown RBP8.75□□□□□ -1.01
SRRM1-208ENST00000470243 AK7Q96M32 723 aa8.75□□□□□ -1.01
SRRM1-208ENST00000470243 TMEM132AQ24JP5 1023 aa8.74□□□□□ -1.01
SRRM1-208ENST00000470243 ZBED2Q9BTP6 218 aa8.74□□□□□ -1.01
SRRM1-208ENST00000470243 SLC4A5Q9BY07 1137 aa8.74□□□□□ -1.01
SRRM1-208ENST00000470243 A0A0G2JS52 829 aa8.73□□□□□ -1.01
SRRM1-208ENST00000470243 ANO8Q9HCE9 1232 aaPredicted RBP8.73□□□□□ -1.01
SRRM1-208ENST00000470243 IFFO2Q5TF58 517 aa8.72□□□□□ -1.01
SRRM1-208ENST00000470243 RGS20O76081 388 aa8.71□□□□□ -1.02
SRRM1-208ENST00000470243 ADAM33Q9BZ11 813 aa8.71□□□□□ -1.02
SRRM1-208ENST00000470243 CDHR5Q9HBB8 845 aa8.71□□□□□ -1.02
SRRM1-208ENST00000470243 GPBP1L1Q9HC44 474 aaPredicted RBP8.71□□□□□ -1.02
SRRM1-208ENST00000470243 TRIM66O15016 1216 aa8.7□□□□□ -1.02
SRRM1-208ENST00000470243 FCHSD2O94868 740 aa8.7□□□□□ -1.02
SRRM1-208ENST00000470243 FECHP22830 423 aa8.7□□□□□ -1.02
SRRM1-208ENST00000470243 GNPATO15228 680 aa8.69□□□□□ -1.02
SRRM1-208ENST00000470243 PHF14O94880 888 aa8.69□□□□□ -1.02
SRRM1-208ENST00000470243 EN1Q05925 392 aaPredicted RBP8.69□□□□□ -1.02
SRRM1-208ENST00000470243 MAP2K5Q13163 448 aa8.69□□□□□ -1.02
SRRM1-208ENST00000470243 ZDHHC16Q969W1 377 aa8.69□□□□□ -1.02
SRRM1-208ENST00000470243 CCDC102AQ96A19 550 aa8.69□□□□□ -1.02
SRRM1-208ENST00000470243 RBM33Q96EV2 1170 aaKnown RBP8.69□□□□□ -1.02
SRRM1-208ENST00000470243 PCDHGA10Q9Y5H3 936 aa8.69□□□□□ -1.02
SRRM1-208ENST00000470243 PTGDRQ13258 359 aa8.68□□□□□ -1.02
SRRM1-208ENST00000470243 HIC1Q14526 733 aa8.68□□□□□ -1.02
SRRM1-208ENST00000470243 JPH4Q96JJ6 628 aa8.68□□□□□ -1.02
SRRM1-208ENST00000470243 MAP3K7O43318 606 aa8.67□□□□□ -1.02
SRRM1-208ENST00000470243 PDE4DQ08499 809 aa8.67□□□□□ -1.02
SRRM1-208ENST00000470243 EPAS1Q99814 870 aa8.67□□□□□ -1.02
SRRM1-208ENST00000470243 NBPF3Q9H094 633 aa8.67□□□□□ -1.02
SRRM1-208ENST00000470243 MINK1Q8N4C8 1332 aaPredicted RBP8.66□□□□□ -1.02
SRRM1-208ENST00000470243 TSR1Q2NL82 804 aaKnown RBP8.66□□□□□ -1.02
SRRM1-208ENST00000470243 GTF3C3Q9Y5Q9 886 aa8.66□□□□□ -1.02
SRRM1-208ENST00000470243 IRF6O14896 467 aa8.65□□□□□ -1.02
SRRM1-208ENST00000470243 PROX2Q3B8N5 592 aa8.65□□□□□ -1.02
SRRM1-208ENST00000470243 TYW1BQ6NUM6 668 aa8.65□□□□□ -1.02
SRRM1-208ENST00000470243 KDM4CQ9H3R0 1056 aa8.64□□□□□ -1.03
SRRM1-208ENST00000470243 BCAMP50895 628 aa8.63□□□□□ -1.03
SRRM1-208ENST00000470243 NPDC1Q9NQX5 325 aaPredicted RBP8.63□□□□□ -1.03
SRRM1-208ENST00000470243 ANKK1Q8NFD2 765 aa8.62□□□□□ -1.03
SRRM1-208ENST00000470243 COL9A1P20849 921 aa8.61□□□□□ -1.03
SRRM1-208ENST00000470243 FBXW7Q969H0 707 aa8.61□□□□□ -1.03
SRRM1-208ENST00000470243 AMHR2Q16671 573 aa8.6□□□□□ -1.03
SRRM1-208ENST00000470243 Q6ZNB5 142 aa8.6□□□□□ -1.03
SRRM1-208ENST00000470243 PARP9Q8IXQ6 854 aa8.6□□□□□ -1.03
SRRM1-208ENST00000470243 RABGEF1Q9UJ41 708 aa8.6□□□□□ -1.03
SRRM1-208ENST00000470243 PPP1R3GB7ZBB8 358 aa8.59□□□□□ -1.03
SRRM1-208ENST00000470243 TIMELESSQ9UNS1 1208 aa8.59□□□□□ -1.03
SRRM1-208ENST00000470243 ITGBL1O95965 494 aaPredicted RBP8.58□□□□□ -1.04
SRRM1-208ENST00000470243 IL27Q8NEV9 243 aa8.58□□□□□ -1.04
SRRM1-208ENST00000470243 TTLL12Q14166 644 aaPredicted RBP8.56□□□□□ -1.04
SRRM1-208ENST00000470243 C6orf132Q5T0Z8 1188 aa8.56□□□□□ -1.04
SRRM1-208ENST00000470243 WBP1LQ9NX94 342 aa8.56□□□□□ -1.04
SRRM1-208ENST00000470243 KIAA1468Q9P260 1216 aa8.56□□□□□ -1.04
SRRM1-208ENST00000470243 SOWAHBA6NEL2 793 aa8.55□□□□□ -1.04
SRRM1-208ENST00000470243 FAM161AQ3B820 660 aa8.55□□□□□ -1.04
SRRM1-208ENST00000470243 PADI6Q6TGC4 694 aa8.55□□□□□ -1.04
SRRM1-208ENST00000470243 ZFRQ96KR1 1074 aaKnown RBP8.55□□□□□ -1.04
SRRM1-208ENST00000470243 FAM117AQ9C073 453 aa8.55□□□□□ -1.04
SRRM1-208ENST00000470243 SEPT9Q9UHD8 586 aaPredicted RBP8.55□□□□□ -1.04
SRRM1-208ENST00000470243 KCNC4Q03721 635 aa8.53□□□□□ -1.04
SRRM1-208ENST00000470243 PHOX2BQ99453 314 aa8.53□□□□□ -1.04
SRRM1-208ENST00000470243 GIGYF2Q6Y7W6 1299 aaKnown RBP8.52□□□□□ -1.05
SRRM1-208ENST00000470243 LAPTM4BQ86VI4 370 aa8.52□□□□□ -1.05
SRRM1-208ENST00000470243 REPIN1Q9BWE0 567 aaKnown RBP8.52□□□□□ -1.05
SRRM1-208ENST00000470243 PLEKHG3A1L390 1219 aa8.51□□□□□ -1.05
SRRM1-208ENST00000470243 CERKQ8TCT0 537 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms