RNA–Protein interactions for RNA: ENST00000469757.1

TRAPPC3-206, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-206ENST00000469757 VWDEQ8N2E2 1590 aa12.81□□□□□ -0.36
TRAPPC3-206ENST00000469757 ANKRD30AQ9BXX3 1397 aa12.81□□□□□ -0.36
TRAPPC3-206ENST00000469757 ABCC3O15438 1527 aa12.8□□□□□ -0.36
TRAPPC3-206ENST00000469757 GCC2Q8IWJ2 1684 aa12.8□□□□□ -0.36
TRAPPC3-206ENST00000469757 UNC13BO14795 1591 aa12.79□□□□□ -0.36
TRAPPC3-206ENST00000469757 PREX1Q8TCU6 1659 aa12.79□□□□□ -0.36
TRAPPC3-206ENST00000469757 PPP6R1Q9UPN7 881 aa12.78□□□□□ -0.36
TRAPPC3-206ENST00000469757 NPATQ14207 1427 aa12.78□□□□□ -0.36
TRAPPC3-206ENST00000469757 LMTK2Q8IWU2 1503 aa12.77□□□□□ -0.37
TRAPPC3-206ENST00000469757 CAMSAP1Q5T5Y3 1602 aa12.77□□□□□ -0.37
TRAPPC3-206ENST00000469757 ZNF142P52746 1687 aaPredicted RBP12.77□□□□□ -0.37
TRAPPC3-206ENST00000469757 FAM50AQ14320 339 aaKnown RBP12.76□□□□□ -0.37
TRAPPC3-206ENST00000469757 LMTK3Q96Q04 1460 aa12.76□□□□□ -0.37
TRAPPC3-206ENST00000469757 CEP152O94986 1710 aa12.75□□□□□ -0.37
TRAPPC3-206ENST00000469757 PZPP20742 1482 aa12.75□□□□□ -0.37
TRAPPC3-206ENST00000469757 AEBP2Q6ZN18 517 aaPredicted RBP12.75□□□□□ -0.37
TRAPPC3-206ENST00000469757 MYO3AQ8NEV4 1616 aa12.74□□□□□ -0.37
TRAPPC3-206ENST00000469757 ANKRD50Q9ULJ7 1429 aa12.74□□□□□ -0.37
TRAPPC3-206ENST00000469757 MLECQ14165 292 aa12.74□□□□□ -0.37
TRAPPC3-206ENST00000469757 PPARGC1BQ86YN6 1023 aaKnown RBP12.73□□□□□ -0.37
TRAPPC3-206ENST00000469757 EFCAB6Q5THR3 1501 aa12.72□□□□□ -0.37
TRAPPC3-206ENST00000469757 KIF3BO15066 747 aa12.72□□□□□ -0.37
TRAPPC3-206ENST00000469757 IQGAP3Q86VI3 1631 aa12.72□□□□□ -0.37
TRAPPC3-206ENST00000469757 SPATA31D1Q6ZQQ2 1576 aa12.72□□□□□ -0.37
TRAPPC3-206ENST00000469757 HFM1A2PYH4 1435 aa12.71□□□□□ -0.37
TRAPPC3-206ENST00000469757 ARHGAP31Q2M1Z3 1444 aa12.71□□□□□ -0.38
TRAPPC3-206ENST00000469757 TET3O43151 1660 aa12.7□□□□□ -0.38
TRAPPC3-206ENST00000469757 ZMYM3Q14202 1370 aa12.7□□□□□ -0.38
TRAPPC3-206ENST00000469757 RRP7BPQ9NSQ0 103 aa12.7□□□□□ -0.38
TRAPPC3-206ENST00000469757 NAIPQ13075 1403 aa12.69□□□□□ -0.38
TRAPPC3-206ENST00000469757 ERVK-7P63135 1459 aa12.68□□□□□ -0.38
TRAPPC3-206ENST00000469757 GGT6Q6P531 493 aa12.68□□□□□ -0.38
TRAPPC3-206ENST00000469757 CHIC2Q9UKJ5 165 aa12.68□□□□□ -0.38
TRAPPC3-206ENST00000469757 CEP170BQ9Y4F5 1589 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC3-206ENST00000469757 RPRD2Q5VT52 1461 aaKnown RBP12.67□□□□□ -0.38
TRAPPC3-206ENST00000469757 UHRF1BP1Q6BDS2 1440 aa12.67□□□□□ -0.38
TRAPPC3-206ENST00000469757 SETD1BQ9UPS6 1966 aaKnown RBP12.67□□□□□ -0.38
TRAPPC3-206ENST00000469757 ESF1Q9H501 851 aaKnown RBP12.66□□□□□ -0.38
TRAPPC3-206ENST00000469757 KANK1Q14678 1352 aa12.65□□□□□ -0.38
TRAPPC3-206ENST00000469757 NLRP1Q9C000 1473 aa12.65□□□□□ -0.38
TRAPPC3-206ENST00000469757 WASHC2CQ9Y4E1 1318 aa12.64□□□□□ -0.39
TRAPPC3-206ENST00000469757 KDM5AP29375 1690 aaKnown RBP12.64□□□□□ -0.39
TRAPPC3-206ENST00000469757 CEBPAP49715 358 aaPredicted RBP12.63□□□□□ -0.39
TRAPPC3-206ENST00000469757 A2ML1A8K2U0 1454 aa12.63□□□□□ -0.39
TRAPPC3-206ENST00000469757 SYNMO15061 1565 aa12.63□□□□□ -0.39
TRAPPC3-206ENST00000469757 E9PCH4 1651 aa12.63□□□□□ -0.39
TRAPPC3-206ENST00000469757 PLA2R1Q13018 1463 aa12.62□□□□□ -0.39
TRAPPC3-206ENST00000469757 TNRQ92752 1358 aa12.62□□□□□ -0.39
TRAPPC3-206ENST00000469757 PIK3C2BO00750 1634 aa12.61□□□□□ -0.39
TRAPPC3-206ENST00000469757 NOS1P29475 1434 aa12.61□□□□□ -0.39
TRAPPC3-206ENST00000469757 STRCQ7RTU9 1775 aa12.59□□□□□ -0.39
TRAPPC3-206ENST00000469757 UBR1Q8IWV7 1749 aa12.59□□□□□ -0.39
TRAPPC3-206ENST00000469757 ITGAEP38570 1179 aa12.58□□□□□ -0.4
TRAPPC3-206ENST00000469757 ADGRB3O60242 1522 aa12.57□□□□□ -0.4
TRAPPC3-206ENST00000469757 POLR1AO95602 1720 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC3-206ENST00000469757 SPHKAPQ2M3C7 1700 aa12.57□□□□□ -0.4
TRAPPC3-206ENST00000469757 UGGT1Q9NYU2 1555 aa12.56□□□□□ -0.4
TRAPPC3-206ENST00000469757 FBXO31Q5XUX0 539 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC3-206ENST00000469757 TRPM2O94759 1503 aa12.55□□□□□ -0.4
TRAPPC3-206ENST00000469757 NEURL4Q96JN8 1562 aa12.55□□□□□ -0.4
TRAPPC3-206ENST00000469757 NUP155O75694 1391 aa12.55□□□□□ -0.4
TRAPPC3-206ENST00000469757 SLIT1O75093 1534 aa12.54□□□□□ -0.4
TRAPPC3-206ENST00000469757 PTPRTO14522 1441 aa12.54□□□□□ -0.4
TRAPPC3-206ENST00000469757 ARHGAP23Q9P227 1491 aa12.53□□□□□ -0.4
TRAPPC3-206ENST00000469757 PLPPR3Q6T4P5 718 aa12.53□□□□□ -0.4
TRAPPC3-206ENST00000469757 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.53□□□□□ -0.4
TRAPPC3-206ENST00000469757 SETD5Q9C0A6 1442 aa12.52□□□□□ -0.41
TRAPPC3-206ENST00000469757 TMEM131LA2VDJ0 1609 aa12.51□□□□□ -0.41
TRAPPC3-206ENST00000469757 HSPA2P54652 639 aa12.5□□□□□ -0.41
TRAPPC3-206ENST00000469757 ACIN1Q9UKV3 1341 aaKnown RBP12.5□□□□□ -0.41
TRAPPC3-206ENST00000469757 MED14O60244 1454 aa12.5□□□□□ -0.41
TRAPPC3-206ENST00000469757 CLTCL1P53675 1640 aa12.48□□□□□ -0.41
TRAPPC3-206ENST00000469757 CFAP65Q6ZU64 1925 aaKnown RBP12.48□□□□□ -0.41
TRAPPC3-206ENST00000469757 IQGAP1P46940 1657 aa12.48□□□□□ -0.41
TRAPPC3-206ENST00000469757 RAB3GAP2Q9H2M9 1393 aa12.47□□□□□ -0.41
TRAPPC3-206ENST00000469757 MYO5BQ9ULV0 1848 aa12.46□□□□□ -0.42
TRAPPC3-206ENST00000469757 SCAF11Q99590 1463 aaKnown RBP12.46□□□□□ -0.42
TRAPPC3-206ENST00000469757 ZFYVE9O95405 1425 aa12.45□□□□□ -0.42
TRAPPC3-206ENST00000469757 SLC52A1Q9NWF4 448 aa12.45□□□□□ -0.42
TRAPPC3-206ENST00000469757 TMEM2Q9UHN6 1383 aa12.44□□□□□ -0.42
TRAPPC3-206ENST00000469757 PKD2Q13563 968 aa12.44□□□□□ -0.42
TRAPPC3-206ENST00000469757 HRCP23327 699 aa12.43□□□□□ -0.42
TRAPPC3-206ENST00000469757 THEMISQ8N1K5 641 aaPredicted RBP12.43□□□□□ -0.42
TRAPPC3-206ENST00000469757 IDI1Q13907 227 aa12.42□□□□□ -0.42
TRAPPC3-206ENST00000469757 LTBP4Q8N2S1 1624 aa12.41□□□□□ -0.42
TRAPPC3-206ENST00000469757 NPHP4O75161 1426 aaPredicted RBP12.41□□□□□ -0.42
TRAPPC3-206ENST00000469757 DMRT2Q9Y5R5 561 aa12.41□□□□□ -0.42
TRAPPC3-206ENST00000469757 KIF1BO60333 1816 aa12.41□□□□□ -0.42
TRAPPC3-206ENST00000469757 NEXMIFQ5QGS0 1516 aa12.41□□□□□ -0.42
TRAPPC3-206ENST00000469757 DIP2AQ14689 1571 aa12.39□□□□□ -0.43
TRAPPC3-206ENST00000469757 SLC4A1APQ9BWU0 796 aaKnown RBP12.39□□□□□ -0.43
TRAPPC3-206ENST00000469757 IFT172Q9UG01 1749 aa12.39□□□□□ -0.43
TRAPPC3-206ENST00000469757 NWD1Q149M9 1564 aa12.38□□□□□ -0.43
TRAPPC3-206ENST00000469757 SETBP1Q9Y6X0 1596 aa12.38□□□□□ -0.43
TRAPPC3-206ENST00000469757 NCKAP5LQ9HCH0 1330 aa12.37□□□□□ -0.43
TRAPPC3-206ENST00000469757 RIMS2Q9UQ26 1411 aa12.37□□□□□ -0.43
TRAPPC3-206ENST00000469757 NRXN3Q9Y4C0 1643 aa12.37□□□□□ -0.43
TRAPPC3-206ENST00000469757 ANKLE2Q86XL3 938 aa12.37□□□□□ -0.43
TRAPPC3-206ENST00000469757 TRIM52Q96A61 297 aa12.37□□□□□ -0.43
TRAPPC3-206ENST00000469757 IQSEC2Q5JU85 1478 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms