RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 RRBP1Q9P2E9 1410 aaKnown RBP22.58■■□□□ 1.21
TMEM39A-205ENST00000468676 SETD1BQ9UPS6 1966 aaKnown RBP22.58■■□□□ 1.2
TMEM39A-205ENST00000468676 PLPPR3Q6T4P5 718 aa22.57■■□□□ 1.2
TMEM39A-205ENST00000468676 ZMYM3Q14202 1370 aa22.55■■□□□ 1.2
TMEM39A-205ENST00000468676 CEBPAP49715 358 aaPredicted RBP22.55■■□□□ 1.2
TMEM39A-205ENST00000468676 RNF17Q9BXT8 1623 aaKnown RBP22.55■■□□□ 1.2
TMEM39A-205ENST00000468676 C3P01024 1663 aa22.55■■□□□ 1.2
TMEM39A-205ENST00000468676 CLTCQ00610 1675 aaKnown RBP22.54■■□□□ 1.2
TMEM39A-205ENST00000468676 ROCK1Q13464 1354 aa22.53■■□□□ 1.2
TMEM39A-205ENST00000468676 WASHC2CQ9Y4E1 1318 aa22.53■■□□□ 1.2
TMEM39A-205ENST00000468676 PTPRKQ15262 1439 aa22.52■■□□□ 1.2
TMEM39A-205ENST00000468676 KDM5DQ9BY66 1539 aa22.52■■□□□ 1.19
TMEM39A-205ENST00000468676 NPATQ14207 1427 aa22.49■■□□□ 1.19
TMEM39A-205ENST00000468676 ITGAEP38570 1179 aa22.49■■□□□ 1.19
TMEM39A-205ENST00000468676 ANKRD50Q9ULJ7 1429 aa22.47■■□□□ 1.19
TMEM39A-205ENST00000468676 ZC3H13Q5T200 1668 aaKnown RBP22.46■■□□□ 1.19
TMEM39A-205ENST00000468676 PREX1Q8TCU6 1659 aa22.46■■□□□ 1.19
TMEM39A-205ENST00000468676 KANK1Q14678 1352 aa22.45■■□□□ 1.18
TMEM39A-205ENST00000468676 LMTK3Q96Q04 1460 aa22.45■■□□□ 1.18
TMEM39A-205ENST00000468676 MROH1Q8NDA8 1641 aa22.45■■□□□ 1.18
TMEM39A-205ENST00000468676 DEPDC5O75140 1603 aa22.44■■□□□ 1.18
TMEM39A-205ENST00000468676 PRDM15P57071 1507 aaPredicted RBP22.44■■□□□ 1.18
TMEM39A-205ENST00000468676 ABCC3O15438 1527 aa22.43■■□□□ 1.18
TMEM39A-205ENST00000468676 UHRF1BP1Q6BDS2 1440 aa22.42■■□□□ 1.18
TMEM39A-205ENST00000468676 PZPP20742 1482 aa22.41■■□□□ 1.18
TMEM39A-205ENST00000468676 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.41■■□□□ 1.18
TMEM39A-205ENST00000468676 CEP152O94986 1710 aa22.37■■□□□ 1.17
TMEM39A-205ENST00000468676 VWDEQ8N2E2 1590 aa22.35■■□□□ 1.17
TMEM39A-205ENST00000468676 ARHGAP31Q2M1Z3 1444 aa22.35■■□□□ 1.17
TMEM39A-205ENST00000468676 LMTK2Q8IWU2 1503 aa22.35■■□□□ 1.17
TMEM39A-205ENST00000468676 CAMSAP1Q5T5Y3 1602 aa22.35■■□□□ 1.17
TMEM39A-205ENST00000468676 FBXO31Q5XUX0 539 aaPredicted RBP22.34■■□□□ 1.17
TMEM39A-205ENST00000468676 TNRQ92752 1358 aa22.33■■□□□ 1.17
TMEM39A-205ENST00000468676 HSPA2P54652 639 aa22.32■■□□□ 1.16
TMEM39A-205ENST00000468676 UNC13BO14795 1591 aa22.3■■□□□ 1.16
TMEM39A-205ENST00000468676 MYO3AQ8NEV4 1616 aa22.3■■□□□ 1.16
TMEM39A-205ENST00000468676 NAIPQ13075 1403 aa22.29■■□□□ 1.16
TMEM39A-205ENST00000468676 CFAP65Q6ZU64 1925 aaKnown RBP22.29■■□□□ 1.16
TMEM39A-205ENST00000468676 ZNF142P52746 1687 aaPredicted RBP22.28■■□□□ 1.16
TMEM39A-205ENST00000468676 HFM1A2PYH4 1435 aa22.28■■□□□ 1.16
TMEM39A-205ENST00000468676 SPATA31D1Q6ZQQ2 1576 aa22.28■■□□□ 1.16
TMEM39A-205ENST00000468676 ERVK-7P63135 1459 aa22.28■■□□□ 1.16
TMEM39A-205ENST00000468676 NLRP1Q9C000 1473 aa22.27■■□□□ 1.16
TMEM39A-205ENST00000468676 GCC2Q8IWJ2 1684 aa22.26■■□□□ 1.15
TMEM39A-205ENST00000468676 CEP170BQ9Y4F5 1589 aaPredicted RBP22.26■■□□□ 1.15
TMEM39A-205ENST00000468676 A2ML1A8K2U0 1454 aa22.26■■□□□ 1.15
TMEM39A-205ENST00000468676 EFCAB6Q5THR3 1501 aa22.25■■□□□ 1.15
TMEM39A-205ENST00000468676 NUP155O75694 1391 aa22.25■■□□□ 1.15
TMEM39A-205ENST00000468676 TET3O43151 1660 aa22.23■■□□□ 1.15
TMEM39A-205ENST00000468676 RPRD2Q5VT52 1461 aaKnown RBP22.23■■□□□ 1.15
TMEM39A-205ENST00000468676 IQGAP3Q86VI3 1631 aa22.23■■□□□ 1.15
TMEM39A-205ENST00000468676 DMRT2Q9Y5R5 561 aa22.21■■□□□ 1.15
TMEM39A-205ENST00000468676 THEMISQ8N1K5 641 aaPredicted RBP22.19■■□□□ 1.14
TMEM39A-205ENST00000468676 PLA2R1Q13018 1463 aa22.18■■□□□ 1.14
TMEM39A-205ENST00000468676 ACIN1Q9UKV3 1341 aaKnown RBP22.17■■□□□ 1.14
TMEM39A-205ENST00000468676 STRCQ7RTU9 1775 aa22.17■■□□□ 1.14
TMEM39A-205ENST00000468676 NOS1P29475 1434 aa22.16■■□□□ 1.14
TMEM39A-205ENST00000468676 UGGT1Q9NYU2 1555 aa22.16■■□□□ 1.14
TMEM39A-205ENST00000468676 PKD2Q13563 968 aa22.15■■□□□ 1.14
TMEM39A-205ENST00000468676 SLC52A1Q9NWF4 448 aa22.14■■□□□ 1.13
TMEM39A-205ENST00000468676 TRIM52Q96A61 297 aa22.13■■□□□ 1.13
TMEM39A-205ENST00000468676 E9PCH4 1651 aa22.12■■□□□ 1.13
TMEM39A-205ENST00000468676 PTPRTO14522 1441 aa22.11■■□□□ 1.13
TMEM39A-205ENST00000468676 SYNMO15061 1565 aa22.1■■□□□ 1.13
TMEM39A-205ENST00000468676 SETD5Q9C0A6 1442 aa22.09■■□□□ 1.13
TMEM39A-205ENST00000468676 IDI1Q13907 227 aa22.09■■□□□ 1.13
TMEM39A-205ENST00000468676 UBR1Q8IWV7 1749 aa22.09■■□□□ 1.13
TMEM39A-205ENST00000468676 NCKAP5LQ9HCH0 1330 aa22.08■■□□□ 1.13
TMEM39A-205ENST00000468676 KDM5AP29375 1690 aaKnown RBP22.08■■□□□ 1.13
TMEM39A-205ENST00000468676 ANKLE2Q86XL3 938 aa22.08■■□□□ 1.13
TMEM39A-205ENST00000468676 STAG3Q9UJ98 1225 aa22.08■■□□□ 1.13
TMEM39A-205ENST00000468676 PIK3C2BO00750 1634 aa22.06■■□□□ 1.12
TMEM39A-205ENST00000468676 SLC4A1APQ9BWU0 796 aaKnown RBP22.04■■□□□ 1.12
TMEM39A-205ENST00000468676 POLR1AO95602 1720 aaPredicted RBP22.03■■□□□ 1.12
TMEM39A-205ENST00000468676 ADGRB3O60242 1522 aa22.01■■□□□ 1.11
TMEM39A-205ENST00000468676 SLIT1O75093 1534 aa22.01■■□□□ 1.11
TMEM39A-205ENST00000468676 EID1Q9Y6B2 187 aa22■■□□□ 1.11
TMEM39A-205ENST00000468676 ARHGAP23Q9P227 1491 aa22■■□□□ 1.11
TMEM39A-205ENST00000468676 SPHKAPQ2M3C7 1700 aa22■■□□□ 1.11
TMEM39A-205ENST00000468676 TMEM2Q9UHN6 1383 aa21.99■■□□□ 1.11
TMEM39A-205ENST00000468676 HRCP23327 699 aa21.99■■□□□ 1.11
TMEM39A-205ENST00000468676 RAB3GAP2Q9H2M9 1393 aa21.99■■□□□ 1.11
TMEM39A-205ENST00000468676 MED14O60244 1454 aa21.98■■□□□ 1.11
TMEM39A-205ENST00000468676 TXNDC2Q86VQ3 553 aa21.97■■□□□ 1.11
TMEM39A-205ENST00000468676 NEURL4Q96JN8 1562 aa21.96■■□□□ 1.11
TMEM39A-205ENST00000468676 HDGFP51858 240 aaKnown RBP21.96■■□□□ 1.11
TMEM39A-205ENST00000468676 MPHOSPH9Q99550 1183 aa21.96■■□□□ 1.11
TMEM39A-205ENST00000468676 SCAF11Q99590 1463 aaKnown RBP21.96■■□□□ 1.11
TMEM39A-205ENST00000468676 NPHP4O75161 1426 aaPredicted RBP21.95■■□□□ 1.1
TMEM39A-205ENST00000468676 TMEM131LA2VDJ0 1609 aa21.95■■□□□ 1.1
TMEM39A-205ENST00000468676 TRPM2O94759 1503 aa21.94■■□□□ 1.1
TMEM39A-205ENST00000468676 CHGAP10645 457 aaKnown RBP21.93■■□□□ 1.1
TMEM39A-205ENST00000468676 LTKP29376 864 aa21.93■■□□□ 1.1
TMEM39A-205ENST00000468676 MYO5BQ9ULV0 1848 aa21.92■■□□□ 1.1
TMEM39A-205ENST00000468676 IQGAP1P46940 1657 aa21.91■■□□□ 1.1
TMEM39A-205ENST00000468676 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.9■■□□□ 1.1
TMEM39A-205ENST00000468676 RIMS2Q9UQ26 1411 aa21.88■■□□□ 1.09
TMEM39A-205ENST00000468676 ZFYVE9O95405 1425 aa21.87■■□□□ 1.09
TMEM39A-205ENST00000468676 CLTCL1P53675 1640 aa21.87■■□□□ 1.09
TMEM39A-205ENST00000468676 KIF1BO60333 1816 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms