RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 DAPK1P53355 1430 aa22.42■■□□□ 1.18
COL27A1-203ENST00000468565 KIF3BO15066 747 aa22.42■■□□□ 1.18
COL27A1-203ENST00000468565 HSPA2P54652 639 aa22.41■■□□□ 1.18
COL27A1-203ENST00000468565 KDM5DQ9BY66 1539 aa22.41■■□□□ 1.18
COL27A1-203ENST00000468565 DUOX2Q9NRD8 1548 aa22.41■■□□□ 1.18
COL27A1-203ENST00000468565 PTPRKQ15262 1439 aa22.37■■□□□ 1.17
COL27A1-203ENST00000468565 ZC3H13Q5T200 1668 aaKnown RBP22.36■■□□□ 1.17
COL27A1-203ENST00000468565 MYO3AQ8NEV4 1616 aa22.35■■□□□ 1.17
COL27A1-203ENST00000468565 ZNF142P52746 1687 aaPredicted RBP22.34■■□□□ 1.17
COL27A1-203ENST00000468565 KIF15Q9NS87 1388 aa22.34■■□□□ 1.17
COL27A1-203ENST00000468565 ERBINQ96RT1 1412 aa22.34■■□□□ 1.17
COL27A1-203ENST00000468565 STRCQ7RTU9 1775 aa22.33■■□□□ 1.17
COL27A1-203ENST00000468565 MROH1Q8NDA8 1641 aa22.33■■□□□ 1.17
COL27A1-203ENST00000468565 WASHC2CQ9Y4E1 1318 aa22.31■■□□□ 1.16
COL27A1-203ENST00000468565 PZPP20742 1482 aa22.31■■□□□ 1.16
COL27A1-203ENST00000468565 ANKRD30AQ9BXX3 1397 aa22.3■■□□□ 1.16
COL27A1-203ENST00000468565 ABCC3O15438 1527 aa22.29■■□□□ 1.16
COL27A1-203ENST00000468565 ADGRL2O95490 1459 aa22.29■■□□□ 1.16
COL27A1-203ENST00000468565 DEPDC5O75140 1603 aa22.29■■□□□ 1.16
COL27A1-203ENST00000468565 CEP152O94986 1710 aa22.28■■□□□ 1.16
COL27A1-203ENST00000468565 FAM50AQ14320 339 aaKnown RBP22.28■■□□□ 1.16
COL27A1-203ENST00000468565 CEP170BQ9Y4F5 1589 aaPredicted RBP22.28■■□□□ 1.16
COL27A1-203ENST00000468565 PRDM15P57071 1507 aaPredicted RBP22.28■■□□□ 1.16
COL27A1-203ENST00000468565 RRP7BPQ9NSQ0 103 aa22.27■■□□□ 1.16
COL27A1-203ENST00000468565 NCOA1Q15788 1441 aa22.27■■□□□ 1.16
COL27A1-203ENST00000468565 CAMSAP1Q5T5Y3 1602 aa22.25■■□□□ 1.15
COL27A1-203ENST00000468565 CHIC2Q9UKJ5 165 aa22.24■■□□□ 1.15
COL27A1-203ENST00000468565 TNRQ92752 1358 aa22.21■■□□□ 1.15
COL27A1-203ENST00000468565 A2ML1A8K2U0 1454 aa22.21■■□□□ 1.15
COL27A1-203ENST00000468565 DMRT2Q9Y5R5 561 aa22.21■■□□□ 1.15
COL27A1-203ENST00000468565 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.2■■□□□ 1.14
COL27A1-203ENST00000468565 FBXO31Q5XUX0 539 aaPredicted RBP22.19■■□□□ 1.14
COL27A1-203ENST00000468565 SPATA31D1Q6ZQQ2 1576 aa22.19■■□□□ 1.14
COL27A1-203ENST00000468565 PLA2R1Q13018 1463 aa22.19■■□□□ 1.14
COL27A1-203ENST00000468565 CFAP65Q6ZU64 1925 aaKnown RBP22.19■■□□□ 1.14
COL27A1-203ENST00000468565 PTPRTO14522 1441 aa22.18■■□□□ 1.14
COL27A1-203ENST00000468565 PPARGC1BQ86YN6 1023 aaKnown RBP22.18■■□□□ 1.14
COL27A1-203ENST00000468565 VWDEQ8N2E2 1590 aa22.17■■□□□ 1.14
COL27A1-203ENST00000468565 NLRP1Q9C000 1473 aa22.16■■□□□ 1.14
COL27A1-203ENST00000468565 KANK1Q14678 1352 aa22.15■■□□□ 1.14
COL27A1-203ENST00000468565 ARHGAP31Q2M1Z3 1444 aa22.15■■□□□ 1.14
COL27A1-203ENST00000468565 ERVK-7P63135 1459 aa22.15■■□□□ 1.14
COL27A1-203ENST00000468565 LMTK2Q8IWU2 1503 aa22.14■■□□□ 1.14
COL27A1-203ENST00000468565 ROCK1Q13464 1354 aa22.14■■□□□ 1.13
COL27A1-203ENST00000468565 ANKRD50Q9ULJ7 1429 aa22.14■■□□□ 1.13
COL27A1-203ENST00000468565 FOXD1Q16676 465 aa22.13■■□□□ 1.13
COL27A1-203ENST00000468565 POLR1AO95602 1720 aaPredicted RBP22.12■■□□□ 1.13
COL27A1-203ENST00000468565 RRBP1Q9P2E9 1410 aaKnown RBP22.11■■□□□ 1.13
COL27A1-203ENST00000468565 ADRA2BP18089 450 aa22.11■■□□□ 1.13
COL27A1-203ENST00000468565 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.11■■□□□ 1.13
COL27A1-203ENST00000468565 UNC13BO14795 1591 aa22.09■■□□□ 1.13
COL27A1-203ENST00000468565 UGGT1Q9NYU2 1555 aa22.09■■□□□ 1.13
COL27A1-203ENST00000468565 PKD2Q13563 968 aa22.09■■□□□ 1.13
COL27A1-203ENST00000468565 ILDR1Q86SU0 546 aaPredicted RBP22.08■■□□□ 1.12
COL27A1-203ENST00000468565 EFCAB6Q5THR3 1501 aa22.07■■□□□ 1.12
COL27A1-203ENST00000468565 NCKAP5LQ9HCH0 1330 aa22.06■■□□□ 1.12
COL27A1-203ENST00000468565 UBR1Q8IWV7 1749 aa22.05■■□□□ 1.12
COL27A1-203ENST00000468565 TET3O43151 1660 aa22.04■■□□□ 1.12
COL27A1-203ENST00000468565 GCC2Q8IWJ2 1684 aa22.04■■□□□ 1.12
COL27A1-203ENST00000468565 THEMISQ8N1K5 641 aaPredicted RBP22.03■■□□□ 1.12
COL27A1-203ENST00000468565 NEURL4Q96JN8 1562 aa22.03■■□□□ 1.12
COL27A1-203ENST00000468565 ITGAEP38570 1179 aa22.02■■□□□ 1.11
COL27A1-203ENST00000468565 FBXO41Q8TF61 875 aa22.02■■□□□ 1.11
COL27A1-203ENST00000468565 CERKQ8TCT0 537 aa22.01■■□□□ 1.11
COL27A1-203ENST00000468565 RPRD2Q5VT52 1461 aaKnown RBP22■■□□□ 1.11
COL27A1-203ENST00000468565 IQGAP3Q86VI3 1631 aa22■■□□□ 1.11
COL27A1-203ENST00000468565 LTBP4Q8N2S1 1624 aa22■■□□□ 1.11
COL27A1-203ENST00000468565 KDM5AP29375 1690 aaKnown RBP22■■□□□ 1.11
COL27A1-203ENST00000468565 PIK3C2BO00750 1634 aa21.98■■□□□ 1.11
COL27A1-203ENST00000468565 SYNMO15061 1565 aa21.98■■□□□ 1.11
COL27A1-203ENST00000468565 NOS1P29475 1434 aa21.97■■□□□ 1.11
COL27A1-203ENST00000468565 ANKLE2Q86XL3 938 aa21.96■■□□□ 1.11
COL27A1-203ENST00000468565 MED14O60244 1454 aa21.96■■□□□ 1.11
COL27A1-203ENST00000468565 E9PCH4 1651 aa21.94■■□□□ 1.1
COL27A1-203ENST00000468565 IQGAP1P46940 1657 aa21.94■■□□□ 1.1
COL27A1-203ENST00000468565 SLIT1O75093 1534 aa21.93■■□□□ 1.1
COL27A1-203ENST00000468565 IQSEC2Q5JU85 1478 aa21.92■■□□□ 1.1
COL27A1-203ENST00000468565 ARHGAP23Q9P227 1491 aa21.92■■□□□ 1.1
COL27A1-203ENST00000468565 NPHP4O75161 1426 aaPredicted RBP21.91■■□□□ 1.1
COL27A1-203ENST00000468565 ADGRB3O60242 1522 aa21.89■■□□□ 1.09
COL27A1-203ENST00000468565 ZNF335Q9H4Z2 1342 aaPredicted RBP21.89■■□□□ 1.09
COL27A1-203ENST00000468565 NAIPQ13075 1403 aa21.89■■□□□ 1.09
COL27A1-203ENST00000468565 SLC52A1Q9NWF4 448 aa21.88■■□□□ 1.09
COL27A1-203ENST00000468565 NUP155O75694 1391 aa21.88■■□□□ 1.09
COL27A1-203ENST00000468565 IDI1Q13907 227 aa21.88■■□□□ 1.09
COL27A1-203ENST00000468565 SCAF11Q99590 1463 aaKnown RBP21.88■■□□□ 1.09
COL27A1-203ENST00000468565 MYO5BQ9ULV0 1848 aa21.85■■□□□ 1.09
COL27A1-203ENST00000468565 HFM1A2PYH4 1435 aa21.85■■□□□ 1.09
COL27A1-203ENST00000468565 STAG3Q9UJ98 1225 aa21.84■■□□□ 1.09
COL27A1-203ENST00000468565 TMEM2Q9UHN6 1383 aa21.84■■□□□ 1.09
COL27A1-203ENST00000468565 CPS1P31327 1500 aa21.83■■□□□ 1.09
COL27A1-203ENST00000468565 SPHKAPQ2M3C7 1700 aa21.81■■□□□ 1.08
COL27A1-203ENST00000468565 TMEM131LA2VDJ0 1609 aa21.81■■□□□ 1.08
COL27A1-203ENST00000468565 TXNDC2Q86VQ3 553 aa21.81■■□□□ 1.08
COL27A1-203ENST00000468565 LTKP29376 864 aa21.8■■□□□ 1.08
COL27A1-203ENST00000468565 EID1Q9Y6B2 187 aa21.8■■□□□ 1.08
COL27A1-203ENST00000468565 STRCP1A6NGW2 1772 aa21.78■■□□□ 1.08
COL27A1-203ENST00000468565 ZFYVE9O95405 1425 aa21.73■■□□□ 1.07
COL27A1-203ENST00000468565 TRPM2O94759 1503 aa21.69■■□□□ 1.06
COL27A1-203ENST00000468565 RIMS2Q9UQ26 1411 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms