RNA–Protein interactions for RNA: ENST00000468528.5

NXF3-204, Transcript of nuclear RNA export factor 3, humanhuman

TSL 5

Gene NXF3, Length 535 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-204ENST00000468528 AGLP35573 1532 aa10.63□□□□□ -0.71
NXF3-204ENST00000468528 ABCA6Q8N139 1617 aa10.62□□□□□ -0.71
NXF3-204ENST00000468528 KIF3BO15066 747 aa10.6□□□□□ -0.71
NXF3-204ENST00000468528 BCORL1Q5H9F3 1711 aa10.6□□□□□ -0.71
NXF3-204ENST00000468528 KANK1Q14678 1352 aa10.6□□□□□ -0.71
NXF3-204ENST00000468528 FAM135AQ9P2D6 1515 aa10.59□□□□□ -0.71
NXF3-204ENST00000468528 NUP155O75694 1391 aa10.57□□□□□ -0.72
NXF3-204ENST00000468528 TRIM52Q96A61 297 aa10.57□□□□□ -0.72
NXF3-204ENST00000468528 RNF17Q9BXT8 1623 aaKnown RBP10.57□□□□□ -0.72
NXF3-204ENST00000468528 KDM5DQ9BY66 1539 aa10.57□□□□□ -0.72
NXF3-204ENST00000468528 UNC13BO14795 1591 aa10.56□□□□□ -0.72
NXF3-204ENST00000468528 DEPDC5O75140 1603 aa10.56□□□□□ -0.72
NXF3-204ENST00000468528 PRDM15P57071 1507 aaPredicted RBP10.56□□□□□ -0.72
NXF3-204ENST00000468528 ARID4BQ4LE39 1312 aaPredicted RBP10.56□□□□□ -0.72
NXF3-204ENST00000468528 ADRA2BP18089 450 aa10.55□□□□□ -0.72
NXF3-204ENST00000468528 CLSPNQ9HAW4 1339 aa10.55□□□□□ -0.72
NXF3-204ENST00000468528 GGT6Q6P531 493 aa10.54□□□□□ -0.72
NXF3-204ENST00000468528 SLC4A1APQ9BWU0 796 aaKnown RBP10.54□□□□□ -0.72
NXF3-204ENST00000468528 ESF1Q9H501 851 aaKnown RBP10.54□□□□□ -0.72
NXF3-204ENST00000468528 WASHC2CQ9Y4E1 1318 aa10.54□□□□□ -0.72
NXF3-204ENST00000468528 VWDEQ8N2E2 1590 aa10.53□□□□□ -0.72
NXF3-204ENST00000468528 CNTLNQ9NXG0 1405 aa10.53□□□□□ -0.72
NXF3-204ENST00000468528 MPHOSPH9Q99550 1183 aa10.53□□□□□ -0.72
NXF3-204ENST00000468528 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.53□□□□□ -0.72
NXF3-204ENST00000468528 LMTK2Q8IWU2 1503 aa10.53□□□□□ -0.72
NXF3-204ENST00000468528 IQGAP3Q86VI3 1631 aa10.52□□□□□ -0.73
NXF3-204ENST00000468528 MROH1Q8NDA8 1641 aa10.51□□□□□ -0.73
NXF3-204ENST00000468528 ZC3H13Q5T200 1668 aaKnown RBP10.51□□□□□ -0.73
NXF3-204ENST00000468528 RPRD2Q5VT52 1461 aaKnown RBP10.51□□□□□ -0.73
NXF3-204ENST00000468528 ARHGAP31Q2M1Z3 1444 aa10.5□□□□□ -0.73
NXF3-204ENST00000468528 PZPP20742 1482 aa10.5□□□□□ -0.73
NXF3-204ENST00000468528 DHX57Q6P158 1386 aaKnown RBP10.5□□□□□ -0.73
NXF3-204ENST00000468528 ABCC3O15438 1527 aa10.49□□□□□ -0.73
NXF3-204ENST00000468528 PKD2Q13563 968 aa10.49□□□□□ -0.73
NXF3-204ENST00000468528 TET3O43151 1660 aa10.48□□□□□ -0.73
NXF3-204ENST00000468528 MLECQ14165 292 aa10.48□□□□□ -0.73
NXF3-204ENST00000468528 CCER1Q8TC90 406 aaPredicted RBP10.48□□□□□ -0.73
NXF3-204ENST00000468528 EFCAB6Q5THR3 1501 aa10.47□□□□□ -0.73
NXF3-204ENST00000468528 SIGLEC1Q9BZZ2 1709 aa10.46□□□□□ -0.74
NXF3-204ENST00000468528 ZMYM3Q14202 1370 aa10.45□□□□□ -0.74
NXF3-204ENST00000468528 MROH2AA6NES4 1674 aa10.44□□□□□ -0.74
NXF3-204ENST00000468528 NPATQ14207 1427 aa10.44□□□□□ -0.74
NXF3-204ENST00000468528 CAMSAP1Q5T5Y3 1602 aa10.44□□□□□ -0.74
NXF3-204ENST00000468528 PTPRTO14522 1441 aa10.43□□□□□ -0.74
NXF3-204ENST00000468528 ANKRD30BQ9BXX2 1392 aa10.43□□□□□ -0.74
NXF3-204ENST00000468528 SLC52A1Q9NWF4 448 aa10.43□□□□□ -0.74
NXF3-204ENST00000468528 ADAMTSL3P82987 1691 aa10.42□□□□□ -0.74
NXF3-204ENST00000468528 TIMELESSQ9UNS1 1208 aa10.42□□□□□ -0.74
NXF3-204ENST00000468528 CCDC144AA2RUR9 1427 aa10.41□□□□□ -0.74
NXF3-204ENST00000468528 NOS1P29475 1434 aa10.41□□□□□ -0.74
NXF3-204ENST00000468528 CEP152O94986 1710 aa10.41□□□□□ -0.74
NXF3-204ENST00000468528 FER1L4A9Z1Z3 1794 aa10.41□□□□□ -0.74
NXF3-204ENST00000468528 E9PCH4 1651 aa10.41□□□□□ -0.74
NXF3-204ENST00000468528 CLTCQ00610 1675 aaKnown RBP10.41□□□□□ -0.74
NXF3-204ENST00000468528 TRPM2O94759 1503 aa10.4□□□□□ -0.74
NXF3-204ENST00000468528 ERVK-7P63135 1459 aa10.39□□□□□ -0.75
NXF3-204ENST00000468528 ZEB1P37275 1124 aaPredicted RBP10.39□□□□□ -0.75
NXF3-204ENST00000468528 SPATA31D1Q6ZQQ2 1576 aa10.39□□□□□ -0.75
NXF3-204ENST00000468528 PLA2R1Q13018 1463 aa10.38□□□□□ -0.75
NXF3-204ENST00000468528 MADDQ8WXG6 1647 aa10.38□□□□□ -0.75
NXF3-204ENST00000468528 FOXD1Q16676 465 aa10.38□□□□□ -0.75
NXF3-204ENST00000468528 STAC3Q96MF2 364 aa10.38□□□□□ -0.75
NXF3-204ENST00000468528 SPHKAPQ2M3C7 1700 aa10.37□□□□□ -0.75
NXF3-204ENST00000468528 NEURL4Q96JN8 1562 aa10.37□□□□□ -0.75
NXF3-204ENST00000468528 TNRQ92752 1358 aa10.37□□□□□ -0.75
NXF3-204ENST00000468528 PTPRMP28827 1452 aa10.36□□□□□ -0.75
NXF3-204ENST00000468528 NLRP1Q9C000 1473 aa10.36□□□□□ -0.75
NXF3-204ENST00000468528 PREX1Q8TCU6 1659 aa10.36□□□□□ -0.75
NXF3-204ENST00000468528 FBXO31Q5XUX0 539 aaPredicted RBP10.35□□□□□ -0.75
NXF3-204ENST00000468528 C3P01024 1663 aa10.34□□□□□ -0.75
NXF3-204ENST00000468528 RIMS1Q86UR5 1692 aaKnown RBP10.34□□□□□ -0.75
NXF3-204ENST00000468528 TONSLQ96HA7 1378 aa10.34□□□□□ -0.75
NXF3-204ENST00000468528 RPGRIP1LQ68CZ1 1315 aa10.33□□□□□ -0.76
NXF3-204ENST00000468528 PIK3C2BO00750 1634 aa10.33□□□□□ -0.76
NXF3-204ENST00000468528 CEBPAP49715 358 aaPredicted RBP10.33□□□□□ -0.76
NXF3-204ENST00000468528 HDGFP51858 240 aaKnown RBP10.33□□□□□ -0.76
NXF3-204ENST00000468528 IDI1Q13907 227 aa10.33□□□□□ -0.76
NXF3-204ENST00000468528 SYNMO15061 1565 aa10.33□□□□□ -0.76
NXF3-204ENST00000468528 SETD1BQ9UPS6 1966 aaKnown RBP10.32□□□□□ -0.76
NXF3-204ENST00000468528 KDM4FA0A1W2PPD8 638 aa10.32□□□□□ -0.76
NXF3-204ENST00000468528 NEUROD1Q13562 356 aa10.32□□□□□ -0.76
NXF3-204ENST00000468528 SIN3AQ96ST3 1273 aa10.32□□□□□ -0.76
NXF3-204ENST00000468528 STAG3Q9UJ98 1225 aa10.32□□□□□ -0.76
NXF3-204ENST00000468528 SPATA31E1Q6ZUB1 1445 aa10.32□□□□□ -0.76
NXF3-204ENST00000468528 KDM5AP29375 1690 aaKnown RBP10.31□□□□□ -0.76
NXF3-204ENST00000468528 THEMISQ8N1K5 641 aaPredicted RBP10.31□□□□□ -0.76
NXF3-204ENST00000468528 CLTCL1P53675 1640 aa10.31□□□□□ -0.76
NXF3-204ENST00000468528 UHRF1BP1Q6BDS2 1440 aa10.3□□□□□ -0.76
NXF3-204ENST00000468528 A2ML1A8K2U0 1454 aa10.3□□□□□ -0.76
NXF3-204ENST00000468528 ADGRB3O60242 1522 aa10.29□□□□□ -0.76
NXF3-204ENST00000468528 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.29□□□□□ -0.76
NXF3-204ENST00000468528 KIF1BO60333 1816 aa10.28□□□□□ -0.76
NXF3-204ENST00000468528 UGGT1Q9NYU2 1555 aa10.28□□□□□ -0.76
NXF3-204ENST00000468528 VGFO15240 615 aaPredicted RBP10.28□□□□□ -0.76
NXF3-204ENST00000468528 CHGAP10645 457 aaKnown RBP10.28□□□□□ -0.76
NXF3-204ENST00000468528 L3MBTL2Q969R5 705 aa10.28□□□□□ -0.76
NXF3-204ENST00000468528 CFAP65Q6ZU64 1925 aaKnown RBP10.27□□□□□ -0.76
NXF3-204ENST00000468528 ZFYVE9O95405 1425 aa10.27□□□□□ -0.77
NXF3-204ENST00000468528 TMEM131LA2VDJ0 1609 aa10.27□□□□□ -0.77
NXF3-204ENST00000468528 RGL3Q3MIN7 710 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms