RNA–Protein interactions for RNA: ENST00000468480.5

RNF6-204, Transcript of ring finger protein 6, humanhuman

TSL 1 (best)

Gene RNF6, Length 1,105 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6-204ENST00000468480 HSPA1LP34931 641 aa24.88■■□□□ 1.57
RNF6-204ENST00000468480 PPP6R1Q9UPN7 881 aa24.88■■□□□ 1.57
RNF6-204ENST00000468480 RRBP1Q9P2E9 1410 aaKnown RBP24.87■■□□□ 1.57
RNF6-204ENST00000468480 A2ML1A8K2U0 1454 aa24.86■■□□□ 1.57
RNF6-204ENST00000468480 KIAA1107Q9UPP5 1409 aa24.85■■□□□ 1.57
RNF6-204ENST00000468480 GGT6Q6P531 493 aa24.84■■□□□ 1.57
RNF6-204ENST00000468480 ALKQ9UM73 1620 aa24.83■■□□□ 1.57
RNF6-204ENST00000468480 PIP4K2BP78356 416 aa24.81■■□□□ 1.56
RNF6-204ENST00000468480 SCAF1Q9H7N4 1312 aaKnown RBP24.81■■□□□ 1.56
RNF6-204ENST00000468480 CPS1P31327 1500 aa24.81■■□□□ 1.56
RNF6-204ENST00000468480 PLEKHH2Q8IVE3 1493 aa24.8■■□□□ 1.56
RNF6-204ENST00000468480 CCNB3Q8WWL7 1395 aa24.8■■□□□ 1.56
RNF6-204ENST00000468480 SHANK2Q9UPX8 1470 aa24.78■■□□□ 1.56
RNF6-204ENST00000468480 VWDEQ8N2E2 1590 aa24.78■■□□□ 1.56
RNF6-204ENST00000468480 MTUS2Q5JR59 1369 aa24.76■■□□□ 1.55
RNF6-204ENST00000468480 STRCP1A6NGW2 1772 aa24.75■■□□□ 1.55
RNF6-204ENST00000468480 CCER1Q8TC90 406 aaPredicted RBP24.75■■□□□ 1.55
RNF6-204ENST00000468480 CFDP1Q9UEE9 299 aaPredicted RBP24.75■■□□□ 1.55
RNF6-204ENST00000468480 EHBP1L1Q8N3D4 1523 aa24.74■■□□□ 1.55
RNF6-204ENST00000468480 TOM1O60784 492 aa24.72■■□□□ 1.55
RNF6-204ENST00000468480 MBD5Q9P267 1494 aa24.71■■□□□ 1.55
RNF6-204ENST00000468480 ZNF644Q9H582 1327 aaPredicted RBP24.71■■□□□ 1.55
RNF6-204ENST00000468480 FBXO31Q5XUX0 539 aaPredicted RBP24.71■■□□□ 1.55
RNF6-204ENST00000468480 TNRQ92752 1358 aa24.7■■□□□ 1.55
RNF6-204ENST00000468480 PZPP20742 1482 aa24.69■■□□□ 1.54
RNF6-204ENST00000468480 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.68■■□□□ 1.54
RNF6-204ENST00000468480 DEPDC5O75140 1603 aa24.68■■□□□ 1.54
RNF6-204ENST00000468480 KDM5DQ9BY66 1539 aa24.66■■□□□ 1.54
RNF6-204ENST00000468480 IQGAP1P46940 1657 aa24.66■■□□□ 1.54
RNF6-204ENST00000468480 DHX29Q7Z478 1369 aaKnown RBP24.65■■□□□ 1.54
RNF6-204ENST00000468480 RTEL1-TNFRSF6BF6WH68 1400 aa24.64■■□□□ 1.54
RNF6-204ENST00000468480 MED14O60244 1454 aa24.64■■□□□ 1.53
RNF6-204ENST00000468480 UGGT1Q9NYU2 1555 aa24.62■■□□□ 1.53
RNF6-204ENST00000468480 NPHP4O75161 1426 aaPredicted RBP24.61■■□□□ 1.53
RNF6-204ENST00000468480 FAM135AQ9P2D6 1515 aa24.61■■□□□ 1.53
RNF6-204ENST00000468480 PHF23Q9BUL5 403 aaPredicted RBP24.6■■□□□ 1.53
RNF6-204ENST00000468480 RNF17Q9BXT8 1623 aaKnown RBP24.6■■□□□ 1.53
RNF6-204ENST00000468480 ANKLE2Q86XL3 938 aa24.59■■□□□ 1.53
RNF6-204ENST00000468480 NLRP1Q9C000 1473 aa24.58■■□□□ 1.53
RNF6-204ENST00000468480 KIF3BO15066 747 aa24.58■■□□□ 1.53
RNF6-204ENST00000468480 MIA2Q96PC5 1412 aa24.58■■□□□ 1.53
RNF6-204ENST00000468480 LRRC7Q96NW7 1537 aa24.57■■□□□ 1.52
RNF6-204ENST00000468480 ZC3H13Q5T200 1668 aaKnown RBP24.57■■□□□ 1.52
RNF6-204ENST00000468480 SYNMO15061 1565 aa24.57■■□□□ 1.52
RNF6-204ENST00000468480 XIRP1Q702N8 1843 aaKnown RBP24.56■■□□□ 1.52
RNF6-204ENST00000468480 SENP3Q9H4L4 574 aaPredicted RBP24.56■■□□□ 1.52
RNF6-204ENST00000468480 NCOA2Q15596 1464 aa24.56■■□□□ 1.52
RNF6-204ENST00000468480 CFAP65Q6ZU64 1925 aaKnown RBP24.55■■□□□ 1.52
RNF6-204ENST00000468480 FGD6Q6ZV73 1430 aa24.54■■□□□ 1.52
RNF6-204ENST00000468480 CCDC141Q6ZP82 1450 aa24.53■■□□□ 1.52
RNF6-204ENST00000468480 THEMISQ8N1K5 641 aaPredicted RBP24.53■■□□□ 1.52
RNF6-204ENST00000468480 MYOM3Q5VTT5 1437 aa24.52■■□□□ 1.52
RNF6-204ENST00000468480 WASHC2CQ9Y4E1 1318 aa24.52■■□□□ 1.52
RNF6-204ENST00000468480 FAM50AQ14320 339 aaKnown RBP24.5■■□□□ 1.51
RNF6-204ENST00000468480 RGS17Q9UGC6 210 aaPredicted RBP24.5■■□□□ 1.51
RNF6-204ENST00000468480 CLSPNQ9HAW4 1339 aa24.5■■□□□ 1.51
RNF6-204ENST00000468480 CAMSAP2Q08AD1 1489 aa24.5■■□□□ 1.51
RNF6-204ENST00000468480 UBR1Q8IWV7 1749 aa24.49■■□□□ 1.51
RNF6-204ENST00000468480 CEP152O94986 1710 aa24.46■■□□□ 1.51
RNF6-204ENST00000468480 ABCC3O15438 1527 aa24.45■■□□□ 1.51
RNF6-204ENST00000468480 ARHGEF5Q12774 1597 aa24.43■■□□□ 1.5
RNF6-204ENST00000468480 MROH1Q8NDA8 1641 aa24.43■■□□□ 1.5
RNF6-204ENST00000468480 ERVK-7P63135 1459 aa24.42■■□□□ 1.5
RNF6-204ENST00000468480 ITGAEP38570 1179 aa24.39■■□□□ 1.49
RNF6-204ENST00000468480 SETD5Q9C0A6 1442 aa24.38■■□□□ 1.49
RNF6-204ENST00000468480 EIF2AK4Q9P2K8 1649 aaKnown RBP24.37■■□□□ 1.49
RNF6-204ENST00000468480 PTPN23Q9H3S7 1636 aa24.36■■□□□ 1.49
RNF6-204ENST00000468480 SCAF11Q99590 1463 aaKnown RBP24.35■■□□□ 1.49
RNF6-204ENST00000468480 MAST1Q9Y2H9 1570 aa24.34■■□□□ 1.49
RNF6-204ENST00000468480 ARHGAP23Q9P227 1491 aa24.33■■□□□ 1.49
RNF6-204ENST00000468480 RSPH4AQ5TD94 716 aa24.33■■□□□ 1.49
RNF6-204ENST00000468480 SETD1AO15047 1707 aaKnown RBP24.32■■□□□ 1.48
RNF6-204ENST00000468480 SLIT1O75093 1534 aa24.32■■□□□ 1.48
RNF6-204ENST00000468480 LTKP29376 864 aa24.31■■□□□ 1.48
RNF6-204ENST00000468480 ACIN1Q9UKV3 1341 aaKnown RBP24.31■■□□□ 1.48
RNF6-204ENST00000468480 POTEAQ6S8J7 498 aa24.3■■□□□ 1.48
RNF6-204ENST00000468480 ROBO1Q9Y6N7 1651 aa24.29■■□□□ 1.48
RNF6-204ENST00000468480 DHX57Q6P158 1386 aaKnown RBP24.29■■□□□ 1.48
RNF6-204ENST00000468480 RAB3GAP2Q9H2M9 1393 aa24.29■■□□□ 1.48
RNF6-204ENST00000468480 PIK3C2BO00750 1634 aa24.28■■□□□ 1.48
RNF6-204ENST00000468480 TSPY4P0CV99 314 aa24.26■■□□□ 1.47
RNF6-204ENST00000468480 TSPY10P0CW01 314 aa24.26■■□□□ 1.47
RNF6-204ENST00000468480 FAM135BQ49AJ0 1406 aa24.26■■□□□ 1.47
RNF6-204ENST00000468480 HFM1A2PYH4 1435 aa24.23■■□□□ 1.47
RNF6-204ENST00000468480 TXNDC2Q86VQ3 553 aa24.22■■□□□ 1.47
RNF6-204ENST00000468480 PRDM15P57071 1507 aaPredicted RBP24.2■■□□□ 1.46
RNF6-204ENST00000468480 KDM5AP29375 1690 aaKnown RBP24.18■■□□□ 1.46
RNF6-204ENST00000468480 TMEM94Q12767 1356 aa24.17■■□□□ 1.46
RNF6-204ENST00000468480 DUOX2Q9NRD8 1548 aa24.17■■□□□ 1.46
RNF6-204ENST00000468480 ARHGAP31Q2M1Z3 1444 aa24.17■■□□□ 1.46
RNF6-204ENST00000468480 PHLPP1O60346 1717 aa24.15■■□□□ 1.46
RNF6-204ENST00000468480 TET3O43151 1660 aa24.15■■□□□ 1.46
RNF6-204ENST00000468480 CROCC2H7BZ55 1655 aa24.15■■□□□ 1.46
RNF6-204ENST00000468480 TMEM2Q9UHN6 1383 aa24.14■■□□□ 1.45
RNF6-204ENST00000468480 RBM33Q96EV2 1170 aaKnown RBP24.13■■□□□ 1.45
RNF6-204ENST00000468480 ROCK1Q13464 1354 aa24.12■■□□□ 1.45
RNF6-204ENST00000468480 NWD1Q149M9 1564 aa24.12■■□□□ 1.45
RNF6-204ENST00000468480 EID1Q9Y6B2 187 aa24.11■■□□□ 1.45
RNF6-204ENST00000468480 EFCAB6Q5THR3 1501 aa24.1■■□□□ 1.45
RNF6-204ENST00000468480 NAIPQ13075 1403 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms