RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 PCGF6Q9BYE7 350 aa22.71■■□□□ 1.23
SNIP1-202ENST00000468040 PRDM15P57071 1507 aaPredicted RBP22.71■■□□□ 1.23
SNIP1-202ENST00000468040 MLECQ14165 292 aa22.7■■□□□ 1.22
SNIP1-202ENST00000468040 PPP6R1Q9UPN7 881 aa22.7■■□□□ 1.22
SNIP1-202ENST00000468040 RAB3GAP2Q9H2M9 1393 aa22.7■■□□□ 1.22
SNIP1-202ENST00000468040 UNC13BO14795 1591 aa22.7■■□□□ 1.22
SNIP1-202ENST00000468040 MROH1Q8NDA8 1641 aa22.69■■□□□ 1.22
SNIP1-202ENST00000468040 FAM135AQ9P2D6 1515 aa22.69■■□□□ 1.22
SNIP1-202ENST00000468040 KANK1Q14678 1352 aa22.67■■□□□ 1.22
SNIP1-202ENST00000468040 HRCP23327 699 aa22.66■■□□□ 1.22
SNIP1-202ENST00000468040 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.65■■□□□ 1.226e-6■□□□□ 11
SNIP1-202ENST00000468040 KDM5DQ9BY66 1539 aa22.64■■□□□ 1.21
SNIP1-202ENST00000468040 ESF1Q9H501 851 aaKnown RBP22.64■■□□□ 1.21
SNIP1-202ENST00000468040 ADAMTSL3P82987 1691 aa22.64■■□□□ 1.21
SNIP1-202ENST00000468040 ZC3H13Q5T200 1668 aaKnown RBP22.64■■□□□ 1.21
SNIP1-202ENST00000468040 CNTLNQ9NXG0 1405 aa22.63■■□□□ 1.21
SNIP1-202ENST00000468040 VWDEQ8N2E2 1590 aa22.63■■□□□ 1.21
SNIP1-202ENST00000468040 NUP155O75694 1391 aa22.63■■□□□ 1.21
SNIP1-202ENST00000468040 WASHC2CQ9Y4E1 1318 aa22.62■■□□□ 1.21
SNIP1-202ENST00000468040 AEBP2Q6ZN18 517 aaPredicted RBP22.62■■□□□ 1.21
SNIP1-202ENST00000468040 FER1L4A9Z1Z3 1794 aa22.62■■□□□ 1.21
SNIP1-202ENST00000468040 ABCC3O15438 1527 aa22.61■■□□□ 1.21
SNIP1-202ENST00000468040 IQGAP3Q86VI3 1631 aa22.6■■□□□ 1.21
SNIP1-202ENST00000468040 TRIM52Q96A61 297 aa22.6■■□□□ 1.21
SNIP1-202ENST00000468040 MADDQ8WXG6 1647 aa22.6■■□□□ 1.21
SNIP1-202ENST00000468040 LMTK2Q8IWU2 1503 aa22.59■■□□□ 1.21
SNIP1-202ENST00000468040 CLTCQ00610 1675 aaKnown RBP22.58■■□□□ 1.2
SNIP1-202ENST00000468040 CEP152O94986 1710 aa22.57■■□□□ 1.2
SNIP1-202ENST00000468040 MROH2AA6NES4 1674 aa22.56■■□□□ 1.2
SNIP1-202ENST00000468040 CAMSAP1Q5T5Y3 1602 aa22.54■■□□□ 1.2
SNIP1-202ENST00000468040 TET3O43151 1660 aa22.54■■□□□ 1.2
SNIP1-202ENST00000468040 RIMS1Q86UR5 1692 aaKnown RBP22.54■■□□□ 1.2
SNIP1-202ENST00000468040 PZPP20742 1482 aa22.53■■□□□ 1.2
SNIP1-202ENST00000468040 EFCAB6Q5THR3 1501 aa22.52■■□□□ 1.2
SNIP1-202ENST00000468040 ZMYM3Q14202 1370 aa22.51■■□□□ 1.19
SNIP1-202ENST00000468040 KDM4FA0A1W2PPD8 638 aa22.51■■□□□ 1.19
SNIP1-202ENST00000468040 ARHGAP31Q2M1Z3 1444 aa22.5■■□□□ 1.19
SNIP1-202ENST00000468040 SLC4A1APQ9BWU0 796 aaKnown RBP22.5■■□□□ 1.19
SNIP1-202ENST00000468040 RPRD2Q5VT52 1461 aaKnown RBP22.48■■□□□ 1.19
SNIP1-202ENST00000468040 MPHOSPH9Q99550 1183 aa22.48■■□□□ 1.19
SNIP1-202ENST00000468040 PTPRMP28827 1452 aa22.47■■□□□ 1.19
SNIP1-202ENST00000468040 NPATQ14207 1427 aa22.47■■□□□ 1.19
SNIP1-202ENST00000468040 C3P01024 1663 aa22.46■■□□□ 1.19
SNIP1-202ENST00000468040 E9PCH4 1651 aa22.45■■□□□ 1.18
SNIP1-202ENST00000468040 PKD2Q13563 968 aa22.43■■□□□ 1.18
SNIP1-202ENST00000468040 CEBPAP49715 358 aaPredicted RBP22.4■■□□□ 1.18
SNIP1-202ENST00000468040 ERVK-7P63135 1459 aa22.39■■□□□ 1.17
SNIP1-202ENST00000468040 PREX1Q8TCU6 1659 aa22.39■■□□□ 1.17
SNIP1-202ENST00000468040 SPATA31D1Q6ZQQ2 1576 aa22.38■■□□□ 1.17
SNIP1-202ENST00000468040 PLPPR3Q6T4P5 718 aa22.37■■□□□ 1.17
SNIP1-202ENST00000468040 FBXO31Q5XUX0 539 aaPredicted RBP22.36■■□□□ 1.17
SNIP1-202ENST00000468040 NOS1P29475 1434 aa22.36■■□□□ 1.17
SNIP1-202ENST00000468040 DHX57Q6P158 1386 aaKnown RBP22.36■■□□□ 1.17
SNIP1-202ENST00000468040 SPHKAPQ2M3C7 1700 aa22.35■■□□□ 1.17
SNIP1-202ENST00000468040 PTPRTO14522 1441 aa22.34■■□□□ 1.17
SNIP1-202ENST00000468040 TNRQ92752 1358 aa22.34■■□□□ 1.17
SNIP1-202ENST00000468040 CFAP65Q6ZU64 1925 aaKnown RBP22.33■■□□□ 1.17
SNIP1-202ENST00000468040 FOXD1Q16676 465 aa22.33■■□□□ 1.17
SNIP1-202ENST00000468040 TRPM2O94759 1503 aa22.32■■□□□ 1.16
SNIP1-202ENST00000468040 SYNMO15061 1565 aa22.31■■□□□ 1.16
SNIP1-202ENST00000468040 PLA2R1Q13018 1463 aa22.28■■□□□ 1.16
SNIP1-202ENST00000468040 NLRP1Q9C000 1473 aa22.28■■□□□ 1.16
SNIP1-202ENST00000468040 SLC52A1Q9NWF4 448 aa22.28■■□□□ 1.16
SNIP1-202ENST00000468040 SETD1BQ9UPS6 1966 aaKnown RBP22.28■■□□□ 1.16
SNIP1-202ENST00000468040 MYO3AQ8NEV4 1616 aa22.27■■□□□ 1.16
SNIP1-202ENST00000468040 ANKRD30BQ9BXX2 1392 aa22.26■■□□□ 1.15
SNIP1-202ENST00000468040 PIK3C2BO00750 1634 aa22.26■■□□□ 1.15
SNIP1-202ENST00000468040 CCDC144AA2RUR9 1427 aa22.25■■□□□ 1.15
SNIP1-202ENST00000468040 UHRF1BP1Q6BDS2 1440 aa22.23■■□□□ 1.15
SNIP1-202ENST00000468040 UGGT1Q9NYU2 1555 aa22.23■■□□□ 1.15
SNIP1-202ENST00000468040 CLTCL1P53675 1640 aa22.22■■□□□ 1.15
SNIP1-202ENST00000468040 IDI1Q13907 227 aa22.21■■□□□ 1.15
SNIP1-202ENST00000468040 A2ML1A8K2U0 1454 aa22.21■■□□□ 1.15
SNIP1-202ENST00000468040 CEP170BQ9Y4F5 1589 aaPredicted RBP22.21■■□□□ 1.15
SNIP1-202ENST00000468040 ZNF142P52746 1687 aaPredicted RBP22.2■■□□□ 1.15
SNIP1-202ENST00000468040 CCER1Q8TC90 406 aaPredicted RBP22.19■■□□□ 1.14
SNIP1-202ENST00000468040 CLSPNQ9HAW4 1339 aa22.19■■□□□ 1.14
SNIP1-202ENST00000468040 KDM5AP29375 1690 aaKnown RBP22.19■■□□□ 1.14
SNIP1-202ENST00000468040 ADGRB3O60242 1522 aa22.17■■□□□ 1.14
SNIP1-202ENST00000468040 KIF1BO60333 1816 aa22.16■■□□□ 1.14
SNIP1-202ENST00000468040 STAG3Q9UJ98 1225 aa22.16■■□□□ 1.14
SNIP1-202ENST00000468040 UBR1Q8IWV7 1749 aa22.14■■□□□ 1.14
SNIP1-202ENST00000468040 TMEM131LA2VDJ0 1609 aa22.14■■□□□ 1.14
SNIP1-202ENST00000468040 NEURL4Q96JN8 1562 aa22.13■■□□□ 1.13
SNIP1-202ENST00000468040 CHGAP10645 457 aaKnown RBP22.13■■□□□ 1.13
SNIP1-202ENST00000468040 LMTK3Q96Q04 1460 aa22.12■■□□□ 1.13
SNIP1-202ENST00000468040 THEMISQ8N1K5 641 aaPredicted RBP22.11■■□□□ 1.13
SNIP1-202ENST00000468040 SPATA31E1Q6ZUB1 1445 aa22.1■■□□□ 1.13
SNIP1-202ENST00000468040 SIN3AQ96ST3 1273 aa22.08■■□□□ 1.13
SNIP1-202ENST00000468040 MYO5BQ9ULV0 1848 aa22.07■■□□□ 1.12
SNIP1-202ENST00000468040 NEUROD1Q13562 356 aa22.06■■□□□ 1.12
SNIP1-202ENST00000468040 TMEM2Q9UHN6 1383 aa22.05■■□□□ 1.12
SNIP1-202ENST00000468040 ZNF326Q5BKZ1 582 aaKnown RBP22.05■■□□□ 1.12
SNIP1-202ENST00000468040 SLIT1O75093 1534 aa22.05■■□□□ 1.12
SNIP1-202ENST00000468040 RPGRIP1LQ68CZ1 1315 aa22.04■■□□□ 1.12
SNIP1-202ENST00000468040 ARHGAP23Q9P227 1491 aa22.03■■□□□ 1.12
SNIP1-202ENST00000468040 HDGFP51858 240 aaKnown RBP22.03■■□□□ 1.12
SNIP1-202ENST00000468040 RGL3Q3MIN7 710 aa22.03■■□□□ 1.12
SNIP1-202ENST00000468040 RIMS2Q9UQ26 1411 aa22.01■■□□□ 1.11
SNIP1-202ENST00000468040 ZFYVE9O95405 1425 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 155.6 ms