RNA–Protein interactions for RNA: ENST00000467997.6

PACRGL-204, Transcript of parkin coregulated like, humanhuman

TSL 5

Gene PACRGL, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-204ENST00000467997 ADGRL2O95490 1459 aa34.15■■■■□ 3.06
PACRGL-204ENST00000467997 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.15■■■■□ 3.06
PACRGL-204ENST00000467997 ERBINQ96RT1 1412 aa34.15■■■■□ 3.06
PACRGL-204ENST00000467997 ZMYM3Q14202 1370 aa34.14■■■■□ 3.06
PACRGL-204ENST00000467997 NCOA1Q15788 1441 aa34.13■■■■□ 3.05
PACRGL-204ENST00000467997 RNF17Q9BXT8 1623 aaKnown RBP34.13■■■■□ 3.05
PACRGL-204ENST00000467997 KDM5DQ9BY66 1539 aa34.12■■■■□ 3.05
PACRGL-204ENST00000467997 LMTK3Q96Q04 1460 aa34.11■■■■□ 3.05
PACRGL-204ENST00000467997 RRBP1Q9P2E9 1410 aaKnown RBP34.08■■■■□ 3.05
PACRGL-204ENST00000467997 WASHC2CQ9Y4E1 1318 aa34.07■■■■□ 3.04
PACRGL-204ENST00000467997 NPATQ14207 1427 aa34.06■■■■□ 3.04
PACRGL-204ENST00000467997 PREX1Q8TCU6 1659 aa34.05■■■■□ 3.04
PACRGL-204ENST00000467997 PTPRKQ15262 1439 aa34.03■■■■□ 3.04
PACRGL-204ENST00000467997 SETD1BQ9UPS6 1966 aaKnown RBP34.03■■■■□ 3.04
PACRGL-204ENST00000467997 UHRF1BP1Q6BDS2 1440 aa34.02■■■■□ 3.04
PACRGL-204ENST00000467997 MROH1Q8NDA8 1641 aa34.01■■■■□ 3.03
PACRGL-204ENST00000467997 ROCK1Q13464 1354 aa34■■■■□ 3.03
PACRGL-204ENST00000467997 ZC3H13Q5T200 1668 aaKnown RBP33.99■■■■□ 3.03
PACRGL-204ENST00000467997 PRDM15P57071 1507 aaPredicted RBP33.98■■■■□ 3.03
PACRGL-204ENST00000467997 ABCC3O15438 1527 aa33.97■■■■□ 3.03
PACRGL-204ENST00000467997 ITGAEP38570 1179 aa33.97■■■■□ 3.03
PACRGL-204ENST00000467997 ANKRD50Q9ULJ7 1429 aa33.96■■■■□ 3.03
PACRGL-204ENST00000467997 DEPDC5O75140 1603 aa33.95■■■■□ 3.02
PACRGL-204ENST00000467997 PZPP20742 1482 aa33.95■■■■□ 3.02
PACRGL-204ENST00000467997 KANK1Q14678 1352 aa33.91■■■■□ 3.02
PACRGL-204ENST00000467997 HSPA2P54652 639 aa33.9■■■■□ 3.02
PACRGL-204ENST00000467997 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.88■■■■□ 3.01
PACRGL-204ENST00000467997 CEP152O94986 1710 aa33.86■■■■□ 3.01
PACRGL-204ENST00000467997 CAMSAP1Q5T5Y3 1602 aa33.84■■■■□ 3.01
PACRGL-204ENST00000467997 MYO3AQ8NEV4 1616 aa33.84■■■■□ 3.01
PACRGL-204ENST00000467997 TNRQ92752 1358 aa33.83■■■■□ 3.01
PACRGL-204ENST00000467997 FBXO31Q5XUX0 539 aaPredicted RBP33.82■■■■□ 3
PACRGL-204ENST00000467997 VWDEQ8N2E2 1590 aa33.8■■■■□ 3
PACRGL-204ENST00000467997 LMTK2Q8IWU2 1503 aa33.79■■■■□ 3
PACRGL-204ENST00000467997 ARHGAP31Q2M1Z3 1444 aa33.78■■■■□ 3
PACRGL-204ENST00000467997 ZNF142P52746 1687 aaPredicted RBP33.78■■■■□ 3
PACRGL-204ENST00000467997 CEP170BQ9Y4F5 1589 aaPredicted RBP33.77■■■■□ 3
PACRGL-204ENST00000467997 SPATA31D1Q6ZQQ2 1576 aa33.75■■■□□ 2.99
PACRGL-204ENST00000467997 ERVK-7P63135 1459 aa33.74■■■□□ 2.99
PACRGL-204ENST00000467997 UNC13BO14795 1591 aa33.73■■■□□ 2.99
PACRGL-204ENST00000467997 A2ML1A8K2U0 1454 aa33.73■■■□□ 2.99
PACRGL-204ENST00000467997 NLRP1Q9C000 1473 aa33.71■■■□□ 2.99
PACRGL-204ENST00000467997 EFCAB6Q5THR3 1501 aa33.69■■■□□ 2.98
PACRGL-204ENST00000467997 NAIPQ13075 1403 aa33.65■■■□□ 2.98
PACRGL-204ENST00000467997 GCC2Q8IWJ2 1684 aa33.64■■■□□ 2.98
PACRGL-204ENST00000467997 HFM1A2PYH4 1435 aa33.63■■■□□ 2.97
PACRGL-204ENST00000467997 PLA2R1Q13018 1463 aa33.62■■■□□ 2.97
PACRGL-204ENST00000467997 TET3O43151 1660 aa33.62■■■□□ 2.97
PACRGL-204ENST00000467997 RPRD2Q5VT52 1461 aaKnown RBP33.61■■■□□ 2.97
PACRGL-204ENST00000467997 DMRT2Q9Y5R5 561 aa33.6■■■□□ 2.97
PACRGL-204ENST00000467997 STRCQ7RTU9 1775 aa33.6■■■□□ 2.97
PACRGL-204ENST00000467997 IQGAP3Q86VI3 1631 aa33.6■■■□□ 2.97
PACRGL-204ENST00000467997 CFAP65Q6ZU64 1925 aaKnown RBP33.6■■■□□ 2.97
PACRGL-204ENST00000467997 NUP155O75694 1391 aa33.59■■■□□ 2.97
PACRGL-204ENST00000467997 UGGT1Q9NYU2 1555 aa33.58■■■□□ 2.97
PACRGL-204ENST00000467997 THEMISQ8N1K5 641 aaPredicted RBP33.54■■■□□ 2.96
PACRGL-204ENST00000467997 NOS1P29475 1434 aa33.53■■■□□ 2.96
PACRGL-204ENST00000467997 PKD2Q13563 968 aa33.52■■■□□ 2.96
PACRGL-204ENST00000467997 PTPRTO14522 1441 aa33.51■■■□□ 2.95
PACRGL-204ENST00000467997 SYNMO15061 1565 aa33.47■■■□□ 2.95
PACRGL-204ENST00000467997 NCKAP5LQ9HCH0 1330 aa33.47■■■□□ 2.95
PACRGL-204ENST00000467997 E9PCH4 1651 aa33.45■■■□□ 2.95
PACRGL-204ENST00000467997 UBR1Q8IWV7 1749 aa33.43■■■□□ 2.94
PACRGL-204ENST00000467997 SLC52A1Q9NWF4 448 aa33.43■■■□□ 2.94
PACRGL-204ENST00000467997 PIK3C2BO00750 1634 aa33.41■■■□□ 2.94
PACRGL-204ENST00000467997 IDI1Q13907 227 aa33.4■■■□□ 2.94
PACRGL-204ENST00000467997 ANKLE2Q86XL3 938 aa33.4■■■□□ 2.94
PACRGL-204ENST00000467997 POLR1AO95602 1720 aaPredicted RBP33.39■■■□□ 2.94
PACRGL-204ENST00000467997 STAG3Q9UJ98 1225 aa33.39■■■□□ 2.94
PACRGL-204ENST00000467997 TRIM52Q96A61 297 aa33.38■■■□□ 2.93
PACRGL-204ENST00000467997 KDM5AP29375 1690 aaKnown RBP33.38■■■□□ 2.93
PACRGL-204ENST00000467997 NEURL4Q96JN8 1562 aa33.34■■■□□ 2.93
PACRGL-204ENST00000467997 ADGRB3O60242 1522 aa33.34■■■□□ 2.93
PACRGL-204ENST00000467997 SLIT1O75093 1534 aa33.33■■■□□ 2.93
PACRGL-204ENST00000467997 ARHGAP23Q9P227 1491 aa33.31■■■□□ 2.92
PACRGL-204ENST00000467997 MED14O60244 1454 aa33.3■■■□□ 2.92
PACRGL-204ENST00000467997 SETD5Q9C0A6 1442 aa33.29■■■□□ 2.92
PACRGL-204ENST00000467997 ACIN1Q9UKV3 1341 aaKnown RBP33.29■■■□□ 2.92
PACRGL-204ENST00000467997 TMEM2Q9UHN6 1383 aa33.28■■■□□ 2.92
PACRGL-204ENST00000467997 SCAF11Q99590 1463 aaKnown RBP33.28■■■□□ 2.92
PACRGL-204ENST00000467997 NPHP4O75161 1426 aaPredicted RBP33.27■■■□□ 2.92
PACRGL-204ENST00000467997 SLC4A1APQ9BWU0 796 aaKnown RBP33.26■■■□□ 2.92
PACRGL-204ENST00000467997 EID1Q9Y6B2 187 aa33.26■■■□□ 2.92
PACRGL-204ENST00000467997 SPHKAPQ2M3C7 1700 aa33.25■■■□□ 2.91
PACRGL-204ENST00000467997 TXNDC2Q86VQ3 553 aa33.22■■■□□ 2.91
PACRGL-204ENST00000467997 IQGAP1P46940 1657 aa33.21■■■□□ 2.91
PACRGL-204ENST00000467997 TMEM131LA2VDJ0 1609 aa33.2■■■□□ 2.91
PACRGL-204ENST00000467997 LTKP29376 864 aa33.2■■■□□ 2.9
PACRGL-204ENST00000467997 TRPM2O94759 1503 aa33.19■■■□□ 2.9
PACRGL-204ENST00000467997 RAB3GAP2Q9H2M9 1393 aa33.18■■■□□ 2.9
PACRGL-204ENST00000467997 CHGAP10645 457 aaKnown RBP33.18■■■□□ 2.9
PACRGL-204ENST00000467997 CERKQ8TCT0 537 aa33.16■■■□□ 2.9
PACRGL-204ENST00000467997 ZNF335Q9H4Z2 1342 aaPredicted RBP33.15■■■□□ 2.9
PACRGL-204ENST00000467997 LTBP4Q8N2S1 1624 aa33.15■■■□□ 2.9
PACRGL-204ENST00000467997 MYO5BQ9ULV0 1848 aa33.12■■■□□ 2.89
PACRGL-204ENST00000467997 HDGFP51858 240 aaKnown RBP33.11■■■□□ 2.89
PACRGL-204ENST00000467997 MPHOSPH9Q99550 1183 aa33.11■■■□□ 2.89
PACRGL-204ENST00000467997 ZFYVE9O95405 1425 aa33.11■■■□□ 2.89
PACRGL-204ENST00000467997 RIMS2Q9UQ26 1411 aa33.1■■■□□ 2.89
PACRGL-204ENST00000467997 CLTCL1P53675 1640 aa33.09■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms