RNA–Protein interactions for RNA: ENST00000467854.1

CNTNAP3B-204, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 1,238 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-204ENST00000467854 FER1L4A9Z1Z3 1794 aa33.7■■■□□ 2.98
CNTNAP3B-204ENST00000467854 PRDM15P57071 1507 aaPredicted RBP33.69■■■□□ 2.98
CNTNAP3B-204ENST00000467854 UNC13BO14795 1591 aa33.69■■■□□ 2.98
CNTNAP3B-204ENST00000467854 MADDQ8WXG6 1647 aa33.69■■■□□ 2.98
CNTNAP3B-204ENST00000467854 GGT6Q6P531 493 aa33.68■■■□□ 2.98
CNTNAP3B-204ENST00000467854 AEBP2Q6ZN18 517 aaPredicted RBP33.66■■■□□ 2.98
CNTNAP3B-204ENST00000467854 SETD5Q9C0A6 1442 aa33.65■■■□□ 2.98
CNTNAP3B-204ENST00000467854 RIMS1Q86UR5 1692 aaKnown RBP33.61■■■□□ 2.97
CNTNAP3B-204ENST00000467854 KDM5DQ9BY66 1539 aa33.61■■■□□ 2.97
CNTNAP3B-204ENST00000467854 CLTCQ00610 1675 aaKnown RBP33.61■■■□□ 2.97
CNTNAP3B-204ENST00000467854 ZC3H13Q5T200 1668 aaKnown RBP33.61■■■□□ 2.97
CNTNAP3B-204ENST00000467854 FAM135AQ9P2D6 1515 aa33.6■■■□□ 2.97
CNTNAP3B-204ENST00000467854 CEP152O94986 1710 aa33.6■■■□□ 2.97
CNTNAP3B-204ENST00000467854 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.58■■■□□ 2.97
CNTNAP3B-204ENST00000467854 RAB3GAP2Q9H2M9 1393 aa33.58■■■□□ 2.97
CNTNAP3B-204ENST00000467854 VWDEQ8N2E2 1590 aa33.57■■■□□ 2.96
CNTNAP3B-204ENST00000467854 ABCC3O15438 1527 aa33.57■■■□□ 2.96
CNTNAP3B-204ENST00000467854 KANK1Q14678 1352 aa33.54■■■□□ 2.96
CNTNAP3B-204ENST00000467854 IQGAP3Q86VI3 1631 aa33.53■■■□□ 2.96
CNTNAP3B-204ENST00000467854 MROH2AA6NES4 1674 aa33.53■■■□□ 2.96
CNTNAP3B-204ENST00000467854 PPP6R1Q9UPN7 881 aa33.53■■■□□ 2.96
CNTNAP3B-204ENST00000467854 CNTLNQ9NXG0 1405 aa33.53■■■□□ 2.96
CNTNAP3B-204ENST00000467854 KDM4FA0A1W2PPD8 638 aa33.52■■■□□ 2.96
CNTNAP3B-204ENST00000467854 ESF1Q9H501 851 aaKnown RBP33.52■■■□□ 2.96
CNTNAP3B-204ENST00000467854 CAMSAP1Q5T5Y3 1602 aa33.5■■■□□ 2.95
CNTNAP3B-204ENST00000467854 WASHC2CQ9Y4E1 1318 aa33.5■■■□□ 2.95
CNTNAP3B-204ENST00000467854 NUP155O75694 1391 aa33.48■■■□□ 2.95
CNTNAP3B-204ENST00000467854 PCGF6Q9BYE7 350 aa33.48■■■□□ 2.95
CNTNAP3B-204ENST00000467854 LMTK2Q8IWU2 1503 aa33.48■■■□□ 2.95
CNTNAP3B-204ENST00000467854 TET3O43151 1660 aa33.45■■■□□ 2.95
CNTNAP3B-204ENST00000467854 C3P01024 1663 aa33.45■■■□□ 2.94
CNTNAP3B-204ENST00000467854 TRIM52Q96A61 297 aa33.44■■■□□ 2.94
CNTNAP3B-204ENST00000467854 PTPRMP28827 1452 aa33.43■■■□□ 2.94
CNTNAP3B-204ENST00000467854 EFCAB6Q5THR3 1501 aa33.43■■■□□ 2.94
CNTNAP3B-204ENST00000467854 PZPP20742 1482 aa33.4■■■□□ 2.94
CNTNAP3B-204ENST00000467854 ZMYM3Q14202 1370 aa33.38■■■□□ 2.93
CNTNAP3B-204ENST00000467854 ACIN1Q9UKV3 1341 aaKnown RBP33.35■■■□□ 2.93
CNTNAP3B-204ENST00000467854 HRCP23327 699 aa33.35■■■□□ 2.93
CNTNAP3B-204ENST00000467854 E9PCH4 1651 aa33.35■■■□□ 2.93
CNTNAP3B-204ENST00000467854 PLPPR3Q6T4P5 718 aa33.33■■■□□ 2.93
CNTNAP3B-204ENST00000467854 NPATQ14207 1427 aa33.32■■■□□ 2.92
CNTNAP3B-204ENST00000467854 ARHGAP31Q2M1Z3 1444 aa33.32■■■□□ 2.92
CNTNAP3B-204ENST00000467854 CEBPAP49715 358 aaPredicted RBP33.31■■■□□ 2.92
CNTNAP3B-204ENST00000467854 PREX1Q8TCU6 1659 aa33.29■■■□□ 2.92
CNTNAP3B-204ENST00000467854 RPRD2Q5VT52 1461 aaKnown RBP33.27■■■□□ 2.92
CNTNAP3B-204ENST00000467854 SLC4A1APQ9BWU0 796 aaKnown RBP33.27■■■□□ 2.92
CNTNAP3B-204ENST00000467854 ERVK-7P63135 1459 aa33.25■■■□□ 2.91
CNTNAP3B-204ENST00000467854 SPATA31D1Q6ZQQ2 1576 aa33.24■■■□□ 2.91
CNTNAP3B-204ENST00000467854 CFAP65Q6ZU64 1925 aaKnown RBP33.24■■■□□ 2.91
CNTNAP3B-204ENST00000467854 MPHOSPH9Q99550 1183 aa33.22■■■□□ 2.91
CNTNAP3B-204ENST00000467854 FBXO31Q5XUX0 539 aaPredicted RBP33.21■■■□□ 2.91
CNTNAP3B-204ENST00000467854 PKD2Q13563 968 aa33.19■■■□□ 2.9
CNTNAP3B-204ENST00000467854 SPHKAPQ2M3C7 1700 aa33.19■■■□□ 2.9
CNTNAP3B-204ENST00000467854 SYNMO15061 1565 aa33.16■■■□□ 2.9
CNTNAP3B-204ENST00000467854 NOS1P29475 1434 aa33.15■■■□□ 2.9
CNTNAP3B-204ENST00000467854 MYO3AQ8NEV4 1616 aa33.15■■■□□ 2.9
CNTNAP3B-204ENST00000467854 TNRQ92752 1358 aa33.14■■■□□ 2.9
CNTNAP3B-204ENST00000467854 FOXD1Q16676 465 aa33.11■■■□□ 2.89
CNTNAP3B-204ENST00000467854 TRPM2O94759 1503 aa33.09■■■□□ 2.89
CNTNAP3B-204ENST00000467854 PTPRTO14522 1441 aa33.08■■■□□ 2.89
CNTNAP3B-204ENST00000467854 UGGT1Q9NYU2 1555 aa33.06■■■□□ 2.88
CNTNAP3B-204ENST00000467854 PIK3C2BO00750 1634 aa33.05■■■□□ 2.88
CNTNAP3B-204ENST00000467854 DHX57Q6P158 1386 aaKnown RBP33.05■■■□□ 2.88
CNTNAP3B-204ENST00000467854 SETD1BQ9UPS6 1966 aaKnown RBP33.05■■■□□ 2.88
CNTNAP3B-204ENST00000467854 PLA2R1Q13018 1463 aa33.05■■■□□ 2.88
CNTNAP3B-204ENST00000467854 ZNF142P52746 1687 aaPredicted RBP33.04■■■□□ 2.88
CNTNAP3B-204ENST00000467854 NLRP1Q9C000 1473 aa33.03■■■□□ 2.88
CNTNAP3B-204ENST00000467854 UHRF1BP1Q6BDS2 1440 aa33.02■■■□□ 2.88
CNTNAP3B-204ENST00000467854 CEP170BQ9Y4F5 1589 aaPredicted RBP33.02■■■□□ 2.88
CNTNAP3B-204ENST00000467854 CLTCL1P53675 1640 aa33.02■■■□□ 2.88
CNTNAP3B-204ENST00000467854 A2ML1A8K2U0 1454 aa32.97■■■□□ 2.87
CNTNAP3B-204ENST00000467854 LMTK3Q96Q04 1460 aa32.94■■■□□ 2.86
CNTNAP3B-204ENST00000467854 ADGRB3O60242 1522 aa32.93■■■□□ 2.86
CNTNAP3B-204ENST00000467854 SLC52A1Q9NWF4 448 aa32.93■■■□□ 2.86
CNTNAP3B-204ENST00000467854 UBR1Q8IWV7 1749 aa32.93■■■□□ 2.86
CNTNAP3B-204ENST00000467854 ANKRD30BQ9BXX2 1392 aa32.93■■■□□ 2.86
CNTNAP3B-204ENST00000467854 IDI1Q13907 227 aa32.92■■■□□ 2.86
CNTNAP3B-204ENST00000467854 CCDC144AA2RUR9 1427 aa32.92■■■□□ 2.86
CNTNAP3B-204ENST00000467854 KDM5AP29375 1690 aaKnown RBP32.9■■■□□ 2.86
CNTNAP3B-204ENST00000467854 KIF1BO60333 1816 aa32.88■■■□□ 2.85
CNTNAP3B-204ENST00000467854 TMEM131LA2VDJ0 1609 aa32.88■■■□□ 2.85
CNTNAP3B-204ENST00000467854 MYO5BQ9ULV0 1848 aa32.87■■■□□ 2.85
CNTNAP3B-204ENST00000467854 CHGAP10645 457 aaKnown RBP32.81■■■□□ 2.84
CNTNAP3B-204ENST00000467854 STAG3Q9UJ98 1225 aa32.81■■■□□ 2.84
CNTNAP3B-204ENST00000467854 HSPA2P54652 639 aa32.75■■■□□ 2.83
CNTNAP3B-204ENST00000467854 THEMISQ8N1K5 641 aaPredicted RBP32.73■■■□□ 2.83
CNTNAP3B-204ENST00000467854 SPATA31E1Q6ZUB1 1445 aa32.73■■■□□ 2.83
CNTNAP3B-204ENST00000467854 NEURL4Q96JN8 1562 aa32.73■■■□□ 2.83
CNTNAP3B-204ENST00000467854 SLIT1O75093 1534 aa32.72■■■□□ 2.83
CNTNAP3B-204ENST00000467854 ARHGAP23Q9P227 1491 aa32.7■■■□□ 2.83
CNTNAP3B-204ENST00000467854 CCER1Q8TC90 406 aaPredicted RBP32.7■■■□□ 2.83
CNTNAP3B-204ENST00000467854 TMEM2Q9UHN6 1383 aa32.69■■■□□ 2.82
CNTNAP3B-204ENST00000467854 POLR1AO95602 1720 aaPredicted RBP32.68■■■□□ 2.82
CNTNAP3B-204ENST00000467854 SIN3AQ96ST3 1273 aa32.68■■■□□ 2.82
CNTNAP3B-204ENST00000467854 ZNF326Q5BKZ1 582 aaKnown RBP32.66■■■□□ 2.82
CNTNAP3B-204ENST00000467854 NEXMIFQ5QGS0 1516 aa32.66■■■□□ 2.82
CNTNAP3B-204ENST00000467854 ZFYVE9O95405 1425 aa32.65■■■□□ 2.82
CNTNAP3B-204ENST00000467854 RIMS2Q9UQ26 1411 aa32.65■■■□□ 2.82
CNTNAP3B-204ENST00000467854 IFT172Q9UG01 1749 aa32.64■■■□□ 2.82
CNTNAP3B-204ENST00000467854 PPLO60437 1756 aa32.63■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms