RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 UNC13BO14795 1591 aa10.17□□□□□ -0.78
SCAF4-204ENST00000467731 TRIM52Q96A61 297 aa10.17□□□□□ -0.78
SCAF4-204ENST00000467731 MROH1Q8NDA8 1641 aa10.16□□□□□ -0.78
SCAF4-204ENST00000467731 RNF17Q9BXT8 1623 aaKnown RBP10.16□□□□□ -0.78
SCAF4-204ENST00000467731 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.15□□□□□ -0.789e-9■□□□□ 9.2
SCAF4-204ENST00000467731 AGLP35573 1532 aa10.15□□□□□ -0.78
SCAF4-204ENST00000467731 PRKCSHP14314 528 aaPredicted RBP10.15□□□□□ -0.78
SCAF4-204ENST00000467731 PRDM15P57071 1507 aaPredicted RBP10.15□□□□□ -0.79
SCAF4-204ENST00000467731 NUP155O75694 1391 aa10.15□□□□□ -0.79
SCAF4-204ENST00000467731 KDM5DQ9BY66 1539 aa10.14□□□□□ -0.79
SCAF4-204ENST00000467731 GGT6Q6P531 493 aa10.14□□□□□ -0.79
SCAF4-204ENST00000467731 IQGAP3Q86VI3 1631 aa10.14□□□□□ -0.79
SCAF4-204ENST00000467731 ACIN1Q9UKV3 1341 aaKnown RBP10.13□□□□□ -0.79
SCAF4-204ENST00000467731 DHX57Q6P158 1386 aaKnown RBP10.13□□□□□ -0.79
SCAF4-204ENST00000467731 FAM135AQ9P2D6 1515 aa10.13□□□□□ -0.79
SCAF4-204ENST00000467731 ARID4BQ4LE39 1312 aaPredicted RBP10.13□□□□□ -0.79
SCAF4-204ENST00000467731 PZPP20742 1482 aa10.13□□□□□ -0.79
SCAF4-204ENST00000467731 CEP152O94986 1710 aa10.12□□□□□ -0.79
SCAF4-204ENST00000467731 VWDEQ8N2E2 1590 aa10.12□□□□□ -0.79
SCAF4-204ENST00000467731 MLECQ14165 292 aa10.11□□□□□ -0.79
SCAF4-204ENST00000467731 SLC4A1APQ9BWU0 796 aaKnown RBP10.11□□□□□ -0.79
SCAF4-204ENST00000467731 MPHOSPH9Q99550 1183 aa10.11□□□□□ -0.79
SCAF4-204ENST00000467731 KANK1Q14678 1352 aa10.11□□□□□ -0.79
SCAF4-204ENST00000467731 ZC3H13Q5T200 1668 aaKnown RBP10.09□□□□□ -0.79
SCAF4-204ENST00000467731 CCER1Q8TC90 406 aaPredicted RBP10.09□□□□□ -0.79
SCAF4-204ENST00000467731 TET3O43151 1660 aa10.09□□□□□ -0.79
SCAF4-204ENST00000467731 ABCC3O15438 1527 aa10.09□□□□□ -0.79
SCAF4-204ENST00000467731 WASHC2CQ9Y4E1 1318 aa10.09□□□□□ -0.79
SCAF4-204ENST00000467731 CFAP65Q6ZU64 1925 aaKnown RBP10.09□□□□□ -0.79
SCAF4-204ENST00000467731 CLTCQ00610 1675 aaKnown RBP10.08□□□□□ -0.8
SCAF4-204ENST00000467731 PKD2Q13563 968 aa10.08□□□□□ -0.8
SCAF4-204ENST00000467731 FOXD1Q16676 465 aa10.08□□□□□ -0.8
SCAF4-204ENST00000467731 LMTK2Q8IWU2 1503 aa10.08□□□□□ -0.8
SCAF4-204ENST00000467731 E9PCH4 1651 aa10.08□□□□□ -0.8
SCAF4-204ENST00000467731 CAMSAP1Q5T5Y3 1602 aa10.07□□□□□ -0.8
SCAF4-204ENST00000467731 EFCAB6Q5THR3 1501 aa10.07□□□□□ -0.8
SCAF4-204ENST00000467731 SLC24A1O60721 1099 aa10.07□□□□□ -0.8
SCAF4-204ENST00000467731 FER1L4A9Z1Z3 1794 aa10.06□□□□□ -0.8
SCAF4-204ENST00000467731 PPP6R1Q9UPN7 881 aa10.06□□□□□ -0.8
SCAF4-204ENST00000467731 ERICH6Q7L0X2 663 aa10.05□□□□□ -0.8
SCAF4-204ENST00000467731 NPATQ14207 1427 aa10.04□□□□□ -0.8
SCAF4-204ENST00000467731 ESF1Q9H501 851 aaKnown RBP10.04□□□□□ -0.8
SCAF4-204ENST00000467731 MADDQ8WXG6 1647 aa10.04□□□□□ -0.8
SCAF4-204ENST00000467731 SPHKAPQ2M3C7 1700 aa10.04□□□□□ -0.8
SCAF4-204ENST00000467731 ADAMTSL3P82987 1691 aa10.03□□□□□ -0.8
SCAF4-204ENST00000467731 ANKRD30BQ9BXX2 1392 aa10.03□□□□□ -0.8
SCAF4-204ENST00000467731 CLSPNQ9HAW4 1339 aa10.03□□□□□ -0.8
SCAF4-204ENST00000467731 MROH2AA6NES4 1674 aa10.02□□□□□ -0.8
SCAF4-204ENST00000467731 RPRD2Q5VT52 1461 aaKnown RBP10.02□□□□□ -0.8
SCAF4-204ENST00000467731 ARHGAP31Q2M1Z3 1444 aa10.02□□□□□ -0.81
SCAF4-204ENST00000467731 CNTLNQ9NXG0 1405 aa10.02□□□□□ -0.81
SCAF4-204ENST00000467731 RIMS1Q86UR5 1692 aaKnown RBP10.02□□□□□ -0.81
SCAF4-204ENST00000467731 PREX1Q8TCU6 1659 aa10.01□□□□□ -0.81
SCAF4-204ENST00000467731 ZMYM3Q14202 1370 aa10.01□□□□□ -0.81
SCAF4-204ENST00000467731 PLA2R1Q13018 1463 aa10.01□□□□□ -0.81
SCAF4-204ENST00000467731 C3P01024 1663 aa10.01□□□□□ -0.81
SCAF4-204ENST00000467731 SIN3AQ96ST3 1273 aa10□□□□□ -0.81
SCAF4-204ENST00000467731 TRPM2O94759 1503 aa10□□□□□ -0.81
SCAF4-204ENST00000467731 PTPRTO14522 1441 aa10□□□□□ -0.81
SCAF4-204ENST00000467731 FBXO31Q5XUX0 539 aaPredicted RBP9.99□□□□□ -0.81
SCAF4-204ENST00000467731 CCDC144AA2RUR9 1427 aa9.98□□□□□ -0.81
SCAF4-204ENST00000467731 SYNMO15061 1565 aa9.98□□□□□ -0.81
SCAF4-204ENST00000467731 NOS1P29475 1434 aa9.98□□□□□ -0.81
SCAF4-204ENST00000467731 NEUROD1Q13562 356 aa9.98□□□□□ -0.81
SCAF4-204ENST00000467731 UGGT1Q9NYU2 1555 aa9.98□□□□□ -0.81
SCAF4-204ENST00000467731 ERVK-7P63135 1459 aa9.98□□□□□ -0.81
SCAF4-204ENST00000467731 CEBPAP49715 358 aaPredicted RBP9.98□□□□□ -0.81
SCAF4-204ENST00000467731 CLTCL1P53675 1640 aa9.98□□□□□ -0.81
SCAF4-204ENST00000467731 SPATA31D1Q6ZQQ2 1576 aa9.97□□□□□ -0.81
SCAF4-204ENST00000467731 PLPPR3Q6T4P5 718 aa9.97□□□□□ -0.81
SCAF4-204ENST00000467731 PIK3C2BO00750 1634 aa9.96□□□□□ -0.82
SCAF4-204ENST00000467731 KIF1BO60333 1816 aa9.96□□□□□ -0.82
SCAF4-204ENST00000467731 PTPRMP28827 1452 aa9.94□□□□□ -0.82
SCAF4-204ENST00000467731 KDM4FA0A1W2PPD8 638 aa9.93□□□□□ -0.82
SCAF4-204ENST00000467731 MYO5BQ9ULV0 1848 aa9.93□□□□□ -0.82
SCAF4-204ENST00000467731 TNRQ92752 1358 aa9.93□□□□□ -0.82
SCAF4-204ENST00000467731 SETD1BQ9UPS6 1966 aaKnown RBP9.93□□□□□ -0.82
SCAF4-204ENST00000467731 IDI1Q13907 227 aa9.93□□□□□ -0.82
SCAF4-204ENST00000467731 SLC52A1Q9NWF4 448 aa9.93□□□□□ -0.82
SCAF4-204ENST00000467731 TONSLQ96HA7 1378 aa9.92□□□□□ -0.82
SCAF4-204ENST00000467731 SPATA31E1Q6ZUB1 1445 aa9.91□□□□□ -0.82
SCAF4-204ENST00000467731 RGL3Q3MIN7 710 aa9.91□□□□□ -0.82
SCAF4-204ENST00000467731 ADGRB3O60242 1522 aa9.91□□□□□ -0.82
SCAF4-204ENST00000467731 TMEM131LA2VDJ0 1609 aa9.9□□□□□ -0.82
SCAF4-204ENST00000467731 MYO3AQ8NEV4 1616 aa9.9□□□□□ -0.82
SCAF4-204ENST00000467731 CHGAP10645 457 aaKnown RBP9.9□□□□□ -0.82
SCAF4-204ENST00000467731 NEURL4Q96JN8 1562 aa9.89□□□□□ -0.83
SCAF4-204ENST00000467731 ZEB1P37275 1124 aaPredicted RBP9.89□□□□□ -0.83
SCAF4-204ENST00000467731 L3MBTL2Q969R5 705 aa9.89□□□□□ -0.83
SCAF4-204ENST00000467731 NLRP1Q9C000 1473 aa9.89□□□□□ -0.83
SCAF4-204ENST00000467731 TIMELESSQ9UNS1 1208 aa9.89□□□□□ -0.83
SCAF4-204ENST00000467731 UBR1Q8IWV7 1749 aa9.89□□□□□ -0.83
SCAF4-204ENST00000467731 STAG3Q9UJ98 1225 aa9.88□□□□□ -0.83
SCAF4-204ENST00000467731 KDM5AP29375 1690 aaKnown RBP9.88□□□□□ -0.83
SCAF4-204ENST00000467731 IFT172Q9UG01 1749 aa9.87□□□□□ -0.83
SCAF4-204ENST00000467731 ZNF326Q5BKZ1 582 aaKnown RBP9.87□□□□□ -0.83
SCAF4-204ENST00000467731 CEP170BQ9Y4F5 1589 aaPredicted RBP9.87□□□□□ -0.83
SCAF4-204ENST00000467731 PPLO60437 1756 aa9.87□□□□□ -0.83
SCAF4-204ENST00000467731 DCAF11Q8TEB1 546 aa9.87□□□□□ -0.83
SCAF4-204ENST00000467731 A2ML1A8K2U0 1454 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms