RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 CROCC2H7BZ55 1655 aa20.65■□□□□ 0.9
SSBP1-206ENST00000467681 WASHC2CQ9Y4E1 1318 aa20.65■□□□□ 0.9
SSBP1-206ENST00000467681 ERBINQ96RT1 1412 aa20.63■□□□□ 0.89
SSBP1-206ENST00000467681 RIMS1Q86UR5 1692 aaKnown RBP20.63■□□□□ 0.89
SSBP1-206ENST00000467681 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.61■□□□□ 0.895e-6■□□□□ 8.4
SSBP1-206ENST00000467681 FER1L4A9Z1Z3 1794 aa20.61■□□□□ 0.89
SSBP1-206ENST00000467681 ANKRD50Q9ULJ7 1429 aa20.61■□□□□ 0.89
SSBP1-206ENST00000467681 SETD1BQ9UPS6 1966 aaKnown RBP20.57■□□□□ 0.88
SSBP1-206ENST00000467681 EIF2AK4Q9P2K8 1649 aaKnown RBP20.55■□□□□ 0.88
SSBP1-206ENST00000467681 FBXO31Q5XUX0 539 aaPredicted RBP20.53■□□□□ 0.88
SSBP1-206ENST00000467681 KANK1Q14678 1352 aa20.53■□□□□ 0.88
SSBP1-206ENST00000467681 RNF17Q9BXT8 1623 aaKnown RBP20.53■□□□□ 0.88
SSBP1-206ENST00000467681 FAM135AQ9P2D6 1515 aa20.53■□□□□ 0.88
SSBP1-206ENST00000467681 NPATQ14207 1427 aa20.51■□□□□ 0.87
SSBP1-206ENST00000467681 KDM5DQ9BY66 1539 aa20.5■□□□□ 0.87
SSBP1-206ENST00000467681 CLTCQ00610 1675 aaKnown RBP20.5■□□□□ 0.87
SSBP1-206ENST00000467681 MROH1Q8NDA8 1641 aa20.49■□□□□ 0.87
SSBP1-206ENST00000467681 MROH2AA6NES4 1674 aa20.48■□□□□ 0.87
SSBP1-206ENST00000467681 ABCC3O15438 1527 aa20.48■□□□□ 0.87
SSBP1-206ENST00000467681 NAIPQ13075 1403 aa20.48■□□□□ 0.87
SSBP1-206ENST00000467681 C3P01024 1663 aa20.48■□□□□ 0.87
SSBP1-206ENST00000467681 HFM1A2PYH4 1435 aa20.45■□□□□ 0.86
SSBP1-206ENST00000467681 PZPP20742 1482 aa20.45■□□□□ 0.86
SSBP1-206ENST00000467681 NUP155O75694 1391 aa20.45■□□□□ 0.86
SSBP1-206ENST00000467681 PRDM15P57071 1507 aaPredicted RBP20.44■□□□□ 0.86
SSBP1-206ENST00000467681 HSPA2P54652 639 aa20.44■□□□□ 0.86
SSBP1-206ENST00000467681 ARHGAP31Q2M1Z3 1444 aa20.44■□□□□ 0.86
SSBP1-206ENST00000467681 DEPDC5O75140 1603 aa20.43■□□□□ 0.86
SSBP1-206ENST00000467681 LMTK3Q96Q04 1460 aa20.43■□□□□ 0.86
SSBP1-206ENST00000467681 VWDEQ8N2E2 1590 aa20.42■□□□□ 0.86
SSBP1-206ENST00000467681 TNRQ92752 1358 aa20.42■□□□□ 0.86
SSBP1-206ENST00000467681 UHRF1BP1Q6BDS2 1440 aa20.42■□□□□ 0.86
SSBP1-206ENST00000467681 LMTK2Q8IWU2 1503 aa20.41■□□□□ 0.86
SSBP1-206ENST00000467681 TRIM52Q96A61 297 aa20.38■□□□□ 0.85
SSBP1-206ENST00000467681 ZC3H13Q5T200 1668 aaKnown RBP20.38■□□□□ 0.85
SSBP1-206ENST00000467681 CFAP65Q6ZU64 1925 aaKnown RBP20.35■□□□□ 0.85
SSBP1-206ENST00000467681 CEP152O94986 1710 aa20.35■□□□□ 0.85
SSBP1-206ENST00000467681 ERVK-7P63135 1459 aa20.35■□□□□ 0.85
SSBP1-206ENST00000467681 UNC13BO14795 1591 aa20.34■□□□□ 0.85
SSBP1-206ENST00000467681 SETD5Q9C0A6 1442 aa20.34■□□□□ 0.85
SSBP1-206ENST00000467681 ACIN1Q9UKV3 1341 aaKnown RBP20.33■□□□□ 0.85
SSBP1-206ENST00000467681 CAMSAP1Q5T5Y3 1602 aa20.33■□□□□ 0.84
SSBP1-206ENST00000467681 PREX1Q8TCU6 1659 aa20.32■□□□□ 0.84
SSBP1-206ENST00000467681 IDI1Q13907 227 aa20.32■□□□□ 0.84
SSBP1-206ENST00000467681 THEMISQ8N1K5 641 aaPredicted RBP20.32■□□□□ 0.84
SSBP1-206ENST00000467681 SPATA31D1Q6ZQQ2 1576 aa20.31■□□□□ 0.84
SSBP1-206ENST00000467681 SLC52A1Q9NWF4 448 aa20.31■□□□□ 0.84
SSBP1-206ENST00000467681 A2ML1A8K2U0 1454 aa20.3■□□□□ 0.84
SSBP1-206ENST00000467681 NLRP1Q9C000 1473 aa20.3■□□□□ 0.84
SSBP1-206ENST00000467681 NOS1P29475 1434 aa20.3■□□□□ 0.84
SSBP1-206ENST00000467681 HRCP23327 699 aa20.3■□□□□ 0.84
SSBP1-206ENST00000467681 RPRD2Q5VT52 1461 aaKnown RBP20.3■□□□□ 0.84
SSBP1-206ENST00000467681 GCC2Q8IWJ2 1684 aa20.29■□□□□ 0.84
SSBP1-206ENST00000467681 SLC4A1APQ9BWU0 796 aaKnown RBP20.29■□□□□ 0.84
SSBP1-206ENST00000467681 EFCAB6Q5THR3 1501 aa20.28■□□□□ 0.84
SSBP1-206ENST00000467681 PKD2Q13563 968 aa20.27■□□□□ 0.84
SSBP1-206ENST00000467681 IQGAP3Q86VI3 1631 aa20.27■□□□□ 0.83
SSBP1-206ENST00000467681 TET3O43151 1660 aa20.26■□□□□ 0.83
SSBP1-206ENST00000467681 MPHOSPH9Q99550 1183 aa20.26■□□□□ 0.83
SSBP1-206ENST00000467681 DMRT2Q9Y5R5 561 aa20.26■□□□□ 0.83
SSBP1-206ENST00000467681 RAB3GAP2Q9H2M9 1393 aa20.24■□□□□ 0.83
SSBP1-206ENST00000467681 CEP170BQ9Y4F5 1589 aaPredicted RBP20.24■□□□□ 0.83
SSBP1-206ENST00000467681 NCKAP5LQ9HCH0 1330 aa20.24■□□□□ 0.83
SSBP1-206ENST00000467681 STAG3Q9UJ98 1225 aa20.23■□□□□ 0.83
SSBP1-206ENST00000467681 MYO3AQ8NEV4 1616 aa20.23■□□□□ 0.83
SSBP1-206ENST00000467681 TRIM26Q12899 539 aaPredicted RBP20.22■□□□□ 0.83
SSBP1-206ENST00000467681 ANKLE2Q86XL3 938 aa20.22■□□□□ 0.83
SSBP1-206ENST00000467681 PTPRTO14522 1441 aa20.19■□□□□ 0.82
SSBP1-206ENST00000467681 UGGT1Q9NYU2 1555 aa20.19■□□□□ 0.82
SSBP1-206ENST00000467681 PLA2R1Q13018 1463 aa20.18■□□□□ 0.82
SSBP1-206ENST00000467681 E9PCH4 1651 aa20.18■□□□□ 0.82
SSBP1-206ENST00000467681 ZNF142P52746 1687 aaPredicted RBP20.18■□□□□ 0.82
SSBP1-206ENST00000467681 SYNMO15061 1565 aa20.17■□□□□ 0.82
SSBP1-206ENST00000467681 FOXD1Q16676 465 aa20.17■□□□□ 0.82
SSBP1-206ENST00000467681 TXNDC2Q86VQ3 553 aa20.16■□□□□ 0.82
SSBP1-206ENST00000467681 CHGAP10645 457 aaKnown RBP20.15■□□□□ 0.82
SSBP1-206ENST00000467681 STRCQ7RTU9 1775 aa20.14■□□□□ 0.81
SSBP1-206ENST00000467681 LTKP29376 864 aa20.14■□□□□ 0.81
SSBP1-206ENST00000467681 TMEM2Q9UHN6 1383 aa20.13■□□□□ 0.81
SSBP1-206ENST00000467681 EID1Q9Y6B2 187 aa20.13■□□□□ 0.81
SSBP1-206ENST00000467681 HDGFP51858 240 aaKnown RBP20.12■□□□□ 0.81
SSBP1-206ENST00000467681 PIK3C2BO00750 1634 aa20.09■□□□□ 0.81
SSBP1-206ENST00000467681 ARHGAP23Q9P227 1491 aa20.09■□□□□ 0.81
SSBP1-206ENST00000467681 UBR1Q8IWV7 1749 aa20.08■□□□□ 0.81
SSBP1-206ENST00000467681 SLIT1O75093 1534 aa20.07■□□□□ 0.8
SSBP1-206ENST00000467681 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.06■□□□□ 0.8
SSBP1-206ENST00000467681 NPHP4O75161 1426 aaPredicted RBP20.05■□□□□ 0.8
SSBP1-206ENST00000467681 MED14O60244 1454 aa20.05■□□□□ 0.8
SSBP1-206ENST00000467681 ADGRB3O60242 1522 aa20.04■□□□□ 0.8
SSBP1-206ENST00000467681 SCAF11Q99590 1463 aaKnown RBP20.04■□□□□ 0.8
SSBP1-206ENST00000467681 KDM5AP29375 1690 aaKnown RBP20.03■□□□□ 0.8
SSBP1-206ENST00000467681 TRPM2O94759 1503 aa20.03■□□□□ 0.8
SSBP1-206ENST00000467681 ZNF326Q5BKZ1 582 aaKnown RBP20.03■□□□□ 0.8
SSBP1-206ENST00000467681 RIMS2Q9UQ26 1411 aa20.02■□□□□ 0.8
SSBP1-206ENST00000467681 TMEM131LA2VDJ0 1609 aa20.02■□□□□ 0.8
SSBP1-206ENST00000467681 SPHKAPQ2M3C7 1700 aa20.02■□□□□ 0.8
SSBP1-206ENST00000467681 NUTM2DQ5VT03 806 aaPredicted RBP20.01■□□□□ 0.79
SSBP1-206ENST00000467681 ZFYVE9O95405 1425 aa20.01■□□□□ 0.79
SSBP1-206ENST00000467681 ANKRD30BQ9BXX2 1392 aa20■□□□□ 0.79
SSBP1-206ENST00000467681 PPP1R15AO75807 674 aaPredicted RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms