RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 PPP6R1Q9UPN7 881 aa21.94■■□□□ 1.1
DDX56-208ENST00000467318 GGT6Q6P531 493 aa21.93■■□□□ 1.1
DDX56-208ENST00000467318 MLECQ14165 292 aa21.92■■□□□ 1.1
DDX56-208ENST00000467318 RNF17Q9BXT8 1623 aaKnown RBP21.91■■□□□ 1.1
DDX56-208ENST00000467318 DEPDC5O75140 1603 aa21.9■■□□□ 1.1
DDX56-208ENST00000467318 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.88■■□□□ 1.092e-7■■□□□ 12.3
DDX56-208ENST00000467318 KANK1Q14678 1352 aa21.88■■□□□ 1.09
DDX56-208ENST00000467318 PRDM15P57071 1507 aaPredicted RBP21.87■■□□□ 1.09
DDX56-208ENST00000467318 UNC13BO14795 1591 aa21.87■■□□□ 1.09
DDX56-208ENST00000467318 TRIM52Q96A61 297 aa21.87■■□□□ 1.09
DDX56-208ENST00000467318 NUP155O75694 1391 aa21.87■■□□□ 1.09
DDX56-208ENST00000467318 MROH1Q8NDA8 1641 aa21.85■■□□□ 1.09
DDX56-208ENST00000467318 WASHC2CQ9Y4E1 1318 aa21.84■■□□□ 1.09
DDX56-208ENST00000467318 FAM135AQ9P2D6 1515 aa21.84■■□□□ 1.09
DDX56-208ENST00000467318 ESF1Q9H501 851 aaKnown RBP21.83■■□□□ 1.09
DDX56-208ENST00000467318 KDM5DQ9BY66 1539 aa21.82■■□□□ 1.08
DDX56-208ENST00000467318 VWDEQ8N2E2 1590 aa21.81■■□□□ 1.08
DDX56-208ENST00000467318 CNTLNQ9NXG0 1405 aa21.79■■□□□ 1.08
DDX56-208ENST00000467318 IQGAP3Q86VI3 1631 aa21.79■■□□□ 1.08
DDX56-208ENST00000467318 ZC3H13Q5T200 1668 aaKnown RBP21.78■■□□□ 1.08
DDX56-208ENST00000467318 LMTK2Q8IWU2 1503 aa21.78■■□□□ 1.08
DDX56-208ENST00000467318 SLC4A1APQ9BWU0 796 aaKnown RBP21.78■■□□□ 1.08
DDX56-208ENST00000467318 ABCC3O15438 1527 aa21.77■■□□□ 1.08
DDX56-208ENST00000467318 MPHOSPH9Q99550 1183 aa21.76■■□□□ 1.07
DDX56-208ENST00000467318 ADAMTSL3P82987 1691 aa21.75■■□□□ 1.07
DDX56-208ENST00000467318 PZPP20742 1482 aa21.75■■□□□ 1.07
DDX56-208ENST00000467318 MADDQ8WXG6 1647 aa21.75■■□□□ 1.07
DDX56-208ENST00000467318 KDM4FA0A1W2PPD8 638 aa21.74■■□□□ 1.07
DDX56-208ENST00000467318 ZEB1P37275 1124 aaPredicted RBP21.74■■□□□ 1.07
DDX56-208ENST00000467318 FER1L4A9Z1Z3 1794 aa21.72■■□□□ 1.07
DDX56-208ENST00000467318 ZMYM3Q14202 1370 aa21.72■■□□□ 1.07
DDX56-208ENST00000467318 CEP152O94986 1710 aa21.72■■□□□ 1.07
DDX56-208ENST00000467318 TET3O43151 1660 aa21.72■■□□□ 1.07
DDX56-208ENST00000467318 ARHGAP31Q2M1Z3 1444 aa21.71■■□□□ 1.07
DDX56-208ENST00000467318 CLTCQ00610 1675 aaKnown RBP21.71■■□□□ 1.07
DDX56-208ENST00000467318 PKD2Q13563 968 aa21.69■■□□□ 1.06
DDX56-208ENST00000467318 MROH2AA6NES4 1674 aa21.69■■□□□ 1.06
DDX56-208ENST00000467318 EFCAB6Q5THR3 1501 aa21.69■■□□□ 1.06
DDX56-208ENST00000467318 RIMS1Q86UR5 1692 aaKnown RBP21.69■■□□□ 1.06
DDX56-208ENST00000467318 RPRD2Q5VT52 1461 aaKnown RBP21.69■■□□□ 1.06
DDX56-208ENST00000467318 PLPPR3Q6T4P5 718 aa21.69■■□□□ 1.06
DDX56-208ENST00000467318 CAMSAP1Q5T5Y3 1602 aa21.69■■□□□ 1.06
DDX56-208ENST00000467318 NPATQ14207 1427 aa21.66■■□□□ 1.06
DDX56-208ENST00000467318 CEBPAP49715 358 aaPredicted RBP21.66■■□□□ 1.06
DDX56-208ENST00000467318 DHX57Q6P158 1386 aaKnown RBP21.66■■□□□ 1.06
DDX56-208ENST00000467318 E9PCH4 1651 aa21.64■■□□□ 1.05
DDX56-208ENST00000467318 PTPRMP28827 1452 aa21.61■■□□□ 1.05
DDX56-208ENST00000467318 FOXD1Q16676 465 aa21.6■■□□□ 1.05
DDX56-208ENST00000467318 C3P01024 1663 aa21.6■■□□□ 1.05
DDX56-208ENST00000467318 FBXO31Q5XUX0 539 aaPredicted RBP21.6■■□□□ 1.05
DDX56-208ENST00000467318 CFAP65Q6ZU64 1925 aaKnown RBP21.59■■□□□ 1.05
DDX56-208ENST00000467318 PTPRTO14522 1441 aa21.58■■□□□ 1.04
DDX56-208ENST00000467318 NOS1P29475 1434 aa21.58■■□□□ 1.04
DDX56-208ENST00000467318 ERVK-7P63135 1459 aa21.57■■□□□ 1.04
DDX56-208ENST00000467318 SPATA31D1Q6ZQQ2 1576 aa21.55■■□□□ 1.04
DDX56-208ENST00000467318 ANKRD30BQ9BXX2 1392 aa21.55■■□□□ 1.04
DDX56-208ENST00000467318 PREX1Q8TCU6 1659 aa21.55■■□□□ 1.04
DDX56-208ENST00000467318 CLSPNQ9HAW4 1339 aa21.54■■□□□ 1.04
DDX56-208ENST00000467318 SLC52A1Q9NWF4 448 aa21.54■■□□□ 1.04
DDX56-208ENST00000467318 CCER1Q8TC90 406 aaPredicted RBP21.53■■□□□ 1.04
DDX56-208ENST00000467318 SPHKAPQ2M3C7 1700 aa21.53■■□□□ 1.04
DDX56-208ENST00000467318 PLA2R1Q13018 1463 aa21.53■■□□□ 1.04
DDX56-208ENST00000467318 TNRQ92752 1358 aa21.52■■□□□ 1.04
DDX56-208ENST00000467318 TRPM2O94759 1503 aa21.52■■□□□ 1.04
DDX56-208ENST00000467318 SETD1BQ9UPS6 1966 aaKnown RBP21.5■■□□□ 1.03
DDX56-208ENST00000467318 CCDC144AA2RUR9 1427 aa21.49■■□□□ 1.03
DDX56-208ENST00000467318 SYNMO15061 1565 aa21.48■■□□□ 1.03
DDX56-208ENST00000467318 IDI1Q13907 227 aa21.47■■□□□ 1.03
DDX56-208ENST00000467318 NLRP1Q9C000 1473 aa21.46■■□□□ 1.03
DDX56-208ENST00000467318 UGGT1Q9NYU2 1555 aa21.46■■□□□ 1.03
DDX56-208ENST00000467318 PIK3C2BO00750 1634 aa21.44■■□□□ 1.02
DDX56-208ENST00000467318 CLTCL1P53675 1640 aa21.41■■□□□ 1.02
DDX56-208ENST00000467318 UHRF1BP1Q6BDS2 1440 aa21.4■■□□□ 1.02
DDX56-208ENST00000467318 SIN3AQ96ST3 1273 aa21.4■■□□□ 1.02
DDX56-208ENST00000467318 STAG3Q9UJ98 1225 aa21.4■■□□□ 1.02
DDX56-208ENST00000467318 MYO3AQ8NEV4 1616 aa21.38■■□□□ 1.01
DDX56-208ENST00000467318 A2ML1A8K2U0 1454 aa21.38■■□□□ 1.01
DDX56-208ENST00000467318 CHGAP10645 457 aaKnown RBP21.37■■□□□ 1.01
DDX56-208ENST00000467318 NEUROD1Q13562 356 aa21.37■■□□□ 1.01
DDX56-208ENST00000467318 KIF1BO60333 1816 aa21.36■■□□□ 1.01
DDX56-208ENST00000467318 NEURL4Q96JN8 1562 aa21.36■■□□□ 1.01
DDX56-208ENST00000467318 KDM5AP29375 1690 aaKnown RBP21.36■■□□□ 1.01
DDX56-208ENST00000467318 THEMISQ8N1K5 641 aaPredicted RBP21.35■■□□□ 1.01
DDX56-208ENST00000467318 CEP170BQ9Y4F5 1589 aaPredicted RBP21.35■■□□□ 1.01
DDX56-208ENST00000467318 ADGRB3O60242 1522 aa21.34■■□□□ 1.01
DDX56-208ENST00000467318 SPATA31E1Q6ZUB1 1445 aa21.34■■□□□ 1.01
DDX56-208ENST00000467318 TMEM131LA2VDJ0 1609 aa21.33■■□□□ 1.01
DDX56-208ENST00000467318 ZNF142P52746 1687 aaPredicted RBP21.33■■□□□ 1
DDX56-208ENST00000467318 RGL3Q3MIN7 710 aa21.31■■□□□ 1
DDX56-208ENST00000467318 UBR1Q8IWV7 1749 aa21.31■■□□□ 1
DDX56-208ENST00000467318 ZNF326Q5BKZ1 582 aaKnown RBP21.31■■□□□ 1
DDX56-208ENST00000467318 TIMELESSQ9UNS1 1208 aa21.31■■□□□ 1
DDX56-208ENST00000467318 RPGRIP1LQ68CZ1 1315 aa21.3■■□□□ 1
DDX56-208ENST00000467318 HDGFP51858 240 aaKnown RBP21.29■■□□□ 1
DDX56-208ENST00000467318 LMTK3Q96Q04 1460 aa21.29■■□□□ 1
DDX56-208ENST00000467318 MYO5BQ9ULV0 1848 aa21.28■■□□□ 1
DDX56-208ENST00000467318 HSPA2P54652 639 aa21.28■■□□□ 1
DDX56-208ENST00000467318 AEBP2Q6ZN18 517 aaPredicted RBP21.28■■□□□ 1
DDX56-208ENST00000467318 STAC3Q96MF2 364 aa21.28■■□□□ 1
DDX56-208ENST00000467318 TONSLQ96HA7 1378 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms