RNA–Protein interactions for RNA: ENST00000467216.2

COL21A1-207, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 5

Gene COL21A1, Length 277 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-207ENST00000467216 TIAM1Q13009 1591 aa21.43■■□□□ 1.02
COL21A1-207ENST00000467216 PIP4K2BP78356 416 aa21.42■■□□□ 1.02
COL21A1-207ENST00000467216 MBD5Q9P267 1494 aa21.42■■□□□ 1.02
COL21A1-207ENST00000467216 CEP162Q5TB80 1403 aa21.41■■□□□ 1.02
COL21A1-207ENST00000467216 RSPH4AQ5TD94 716 aa21.41■■□□□ 1.02
COL21A1-207ENST00000467216 ANKLE2Q86XL3 938 aa21.4■■□□□ 1.02
COL21A1-207ENST00000467216 FBXO31Q5XUX0 539 aaPredicted RBP21.39■■□□□ 1.01
COL21A1-207ENST00000467216 DNMT1P26358 1616 aaKnown RBP21.39■■□□□ 1.01
COL21A1-207ENST00000467216 CCDC141Q6ZP82 1450 aa21.39■■□□□ 1.01
COL21A1-207ENST00000467216 THEMISQ8N1K5 641 aaPredicted RBP21.38■■□□□ 1.01
COL21A1-207ENST00000467216 TSPY4P0CV99 314 aa21.37■■□□□ 1.01
COL21A1-207ENST00000467216 TSPY10P0CW01 314 aa21.37■■□□□ 1.01
COL21A1-207ENST00000467216 KDM5DQ9BY66 1539 aa21.37■■□□□ 1.01
COL21A1-207ENST00000467216 CPS1P31327 1500 aa21.36■■□□□ 1.01
COL21A1-207ENST00000467216 PZPP20742 1482 aa21.36■■□□□ 1.01
COL21A1-207ENST00000467216 FAM135AQ9P2D6 1515 aa21.35■■□□□ 1.01
COL21A1-207ENST00000467216 HSPA1LP34931 641 aa21.34■■□□□ 1.01
COL21A1-207ENST00000467216 CAMSAP2Q08AD1 1489 aa21.33■■□□□ 1.01
COL21A1-207ENST00000467216 SHANK2Q9UPX8 1470 aa21.33■■□□□ 1.01
COL21A1-207ENST00000467216 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.33■■□□□ 1
COL21A1-207ENST00000467216 MIA2Q96PC5 1412 aa21.31■■□□□ 1
COL21A1-207ENST00000467216 POLR1AO95602 1720 aaPredicted RBP21.31■■□□□ 1
COL21A1-207ENST00000467216 NCOA2Q15596 1464 aa21.31■■□□□ 1
COL21A1-207ENST00000467216 NLRP1Q9C000 1473 aa21.31■■□□□ 1
COL21A1-207ENST00000467216 NPHP4O75161 1426 aaPredicted RBP21.29■■□□□ 1
COL21A1-207ENST00000467216 UGGT1Q9NYU2 1555 aa21.28■■□□□ 1
COL21A1-207ENST00000467216 PHF23Q9BUL5 403 aaPredicted RBP21.28■■□□□ 1
COL21A1-207ENST00000467216 NEURL4Q96JN8 1562 aa21.27■■□□□ 1
COL21A1-207ENST00000467216 MED1Q15648 1581 aaPredicted RBP21.23■□□□□ 0.99
COL21A1-207ENST00000467216 ARHGEF5Q12774 1597 aa21.22■□□□□ 0.99
COL21A1-207ENST00000467216 MED14O60244 1454 aa21.2■□□□□ 0.98
COL21A1-207ENST00000467216 VWDEQ8N2E2 1590 aa21.2■□□□□ 0.98
COL21A1-207ENST00000467216 DEPDC5O75140 1603 aa21.2■□□□□ 0.98
COL21A1-207ENST00000467216 SENP3Q9H4L4 574 aaPredicted RBP21.2■□□□□ 0.98
COL21A1-207ENST00000467216 IQGAP1P46940 1657 aa21.16■□□□□ 0.98
COL21A1-207ENST00000467216 ABCC3O15438 1527 aa21.16■□□□□ 0.98
COL21A1-207ENST00000467216 ZC3H13Q5T200 1668 aaKnown RBP21.14■□□□□ 0.97
COL21A1-207ENST00000467216 RNF17Q9BXT8 1623 aaKnown RBP21.14■□□□□ 0.97
COL21A1-207ENST00000467216 ERVK-7P63135 1459 aa21.13■□□□□ 0.97
COL21A1-207ENST00000467216 LRRC9Q6ZRR7 1453 aa21.13■□□□□ 0.97
COL21A1-207ENST00000467216 EID1Q9Y6B2 187 aa21.11■□□□□ 0.97
COL21A1-207ENST00000467216 MAST1Q9Y2H9 1570 aa21.1■□□□□ 0.97
COL21A1-207ENST00000467216 LRRC7Q96NW7 1537 aa21.1■□□□□ 0.97
COL21A1-207ENST00000467216 TXNDC2Q86VQ3 553 aa21.1■□□□□ 0.97
COL21A1-207ENST00000467216 EIF2AK4Q9P2K8 1649 aaKnown RBP21.1■□□□□ 0.97
COL21A1-207ENST00000467216 SCAF11Q99590 1463 aaKnown RBP21.09■□□□□ 0.97
COL21A1-207ENST00000467216 STAG3Q9UJ98 1225 aa21.09■□□□□ 0.97
COL21A1-207ENST00000467216 VPS8Q8N3P4 1428 aa21.09■□□□□ 0.97
COL21A1-207ENST00000467216 SYNMO15061 1565 aa21.09■□□□□ 0.97
COL21A1-207ENST00000467216 MYOM3Q5VTT5 1437 aa21.08■□□□□ 0.97
COL21A1-207ENST00000467216 DUOX2Q9NRD8 1548 aa21.06■□□□□ 0.96
COL21A1-207ENST00000467216 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.05■□□□□ 0.96
COL21A1-207ENST00000467216 ALKQ9UM73 1620 aa21.04■□□□□ 0.96
COL21A1-207ENST00000467216 KANK1Q14678 1352 aa21.03■□□□□ 0.96
COL21A1-207ENST00000467216 KIF15Q9NS87 1388 aa21.03■□□□□ 0.96
COL21A1-207ENST00000467216 KANK4Q5T7N3 995 aaPredicted RBP21.03■□□□□ 0.96
COL21A1-207ENST00000467216 CEP152O94986 1710 aa21.02■□□□□ 0.96
COL21A1-207ENST00000467216 LTKP29376 864 aa21.02■□□□□ 0.96
COL21A1-207ENST00000467216 APLP2Q06481 763 aa21.02■□□□□ 0.96
COL21A1-207ENST00000467216 RRP7BPQ9NSQ0 103 aa21.02■□□□□ 0.96
COL21A1-207ENST00000467216 UBR1Q8IWV7 1749 aa21.01■□□□□ 0.95
COL21A1-207ENST00000467216 MROH1Q8NDA8 1641 aa21■□□□□ 0.95
COL21A1-207ENST00000467216 STRCP1A6NGW2 1772 aa21■□□□□ 0.95
COL21A1-207ENST00000467216 CFAP65Q6ZU64 1925 aaKnown RBP21■□□□□ 0.95
COL21A1-207ENST00000467216 ARHGAP31Q2M1Z3 1444 aa21■□□□□ 0.95
COL21A1-207ENST00000467216 ERBINQ96RT1 1412 aa20.99■□□□□ 0.95
COL21A1-207ENST00000467216 SLIT1O75093 1534 aa20.99■□□□□ 0.95
COL21A1-207ENST00000467216 MAP3K1Q13233 1512 aa20.99■□□□□ 0.95
COL21A1-207ENST00000467216 ARHGAP23Q9P227 1491 aa20.98■□□□□ 0.95
COL21A1-207ENST00000467216 TMEM2Q9UHN6 1383 aa20.96■□□□□ 0.95
COL21A1-207ENST00000467216 PRDM15P57071 1507 aaPredicted RBP20.95■□□□□ 0.94
COL21A1-207ENST00000467216 LOC105371045A0A1W2PR82 267 aa20.95■□□□□ 0.94
COL21A1-207ENST00000467216 BCANQ96GW7 911 aa20.94■□□□□ 0.94
COL21A1-207ENST00000467216 ABCC5O15440 1437 aa20.93■□□□□ 0.94
COL21A1-207ENST00000467216 KCNA6P17658 529 aa20.91■□□□□ 0.94
COL21A1-207ENST00000467216 TMEM94Q12767 1356 aa20.91■□□□□ 0.94
COL21A1-207ENST00000467216 PROSER2Q86WR7 435 aaPredicted RBP20.91■□□□□ 0.94
COL21A1-207ENST00000467216 ANKRD30AQ9BXX3 1397 aa20.91■□□□□ 0.94
COL21A1-207ENST00000467216 FAM135BQ49AJ0 1406 aa20.9■□□□□ 0.94
COL21A1-207ENST00000467216 PIK3C2BO00750 1634 aa20.89■□□□□ 0.94
COL21A1-207ENST00000467216 EFCAB6Q5THR3 1501 aa20.89■□□□□ 0.94
COL21A1-207ENST00000467216 DAPK1P53355 1430 aa20.89■□□□□ 0.94
COL21A1-207ENST00000467216 IDI1Q13907 227 aa20.89■□□□□ 0.93
COL21A1-207ENST00000467216 SLC26A8Q96RN1 970 aa20.89■□□□□ 0.93
COL21A1-207ENST00000467216 CHIC2Q9UKJ5 165 aa20.89■□□□□ 0.93
COL21A1-207ENST00000467216 PTPN23Q9H3S7 1636 aa20.88■□□□□ 0.93
COL21A1-207ENST00000467216 RGS17Q9UGC6 210 aaPredicted RBP20.86■□□□□ 0.93
COL21A1-207ENST00000467216 CROCC2H7BZ55 1655 aa20.86■□□□□ 0.93
COL21A1-207ENST00000467216 SLC52A1Q9NWF4 448 aa20.84■□□□□ 0.93
COL21A1-207ENST00000467216 PPP1R15AO75807 674 aaPredicted RBP20.83■□□□□ 0.93
COL21A1-207ENST00000467216 RBM33Q96EV2 1170 aaKnown RBP20.83■□□□□ 0.93
COL21A1-207ENST00000467216 FGD6Q6ZV73 1430 aa20.83■□□□□ 0.93
COL21A1-207ENST00000467216 MSH6P52701 1360 aa20.83■□□□□ 0.92
COL21A1-207ENST00000467216 HDGFP51858 240 aaKnown RBP20.82■□□□□ 0.92
COL21A1-207ENST00000467216 LMTK2Q8IWU2 1503 aa20.82■□□□□ 0.92
COL21A1-207ENST00000467216 KDM5AP29375 1690 aaKnown RBP20.81■□□□□ 0.92
COL21A1-207ENST00000467216 XIRP1Q702N8 1843 aaKnown RBP20.81■□□□□ 0.92
COL21A1-207ENST00000467216 NKTRP30414 1462 aaKnown RBP20.79■□□□□ 0.92
COL21A1-207ENST00000467216 ADGRB3O60242 1522 aa20.78■□□□□ 0.92
COL21A1-207ENST00000467216 POTEAQ6S8J7 498 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms