RNA–Protein interactions for RNA: ENST00000467047.1

PCK1-202, Transcript of phosphoenolpyruvate carboxykinase 1, humanhuman

TSL 1 (best)

Gene PCK1, Length 5,074 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1-202ENST00000467047 CEP89Q96ST8 783 aa13.18□□□□□ -0.3
PCK1-202ENST00000467047 SLC4A10Q6U841 1118 aa13.18□□□□□ -0.3
PCK1-202ENST00000467047 MPHOSPH9Q99550 1183 aa13.18□□□□□ -0.3
PCK1-202ENST00000467047 TOMM22Q9NS69 142 aa13.18□□□□□ -0.3
PCK1-202ENST00000467047 MARCH6O60337 910 aa13.17□□□□□ -0.3
PCK1-202ENST00000467047 WASHC2CQ9Y4E1 1318 aa13.17□□□□□ -0.3
PCK1-202ENST00000467047 CHMP4CQ96CF2 233 aa13.16□□□□□ -0.3
PCK1-202ENST00000467047 FOXD1Q16676 465 aa13.15□□□□□ -0.3
PCK1-202ENST00000467047 SETQ01105 290 aaPredicted RBP13.15□□□□□ -0.3
PCK1-202ENST00000467047 SLKQ9H2G2 1235 aaPredicted RBP13.15□□□□□ -0.3
PCK1-202ENST00000467047 DDX11L8A8MPP1 907 aa13.14□□□□□ -0.31
PCK1-202ENST00000467047 GOLGA6L1Q8N7Z2 621 aa13.14□□□□□ -0.31
PCK1-202ENST00000467047 MYO15BQ96JP2 1530 aa13.14□□□□□ -0.31
PCK1-202ENST00000467047 MFAP1P55081 439 aaKnown RBP13.14□□□□□ -0.31
PCK1-202ENST00000467047 LTV1Q96GA3 475 aaPredicted RBP13.13□□□□□ -0.31
PCK1-202ENST00000467047 FMN1Q68DA7 1419 aa13.13□□□□□ -0.31
PCK1-202ENST00000467047 BAZ1AQ9NRL2 1556 aaPredicted RBP13.13□□□□□ -0.31
PCK1-202ENST00000467047 NLRP13Q86W25 1043 aa13.13□□□□□ -0.31
PCK1-202ENST00000467047 PDS5BQ9NTI5 1447 aa13.13□□□□□ -0.31
PCK1-202ENST00000467047 TPM3P06753 285 aa13.13□□□□□ -0.31
PCK1-202ENST00000467047 KIF16BQ96L93 1317 aa13.13□□□□□ -0.31
PCK1-202ENST00000467047 PDE3BQ13370 1112 aa13.13□□□□□ -0.31
PCK1-202ENST00000467047 SF3A1Q15459 793 aaKnown RBP13.13□□□□□ -0.31
PCK1-202ENST00000467047 CENPJQ9HC77 1338 aaPredicted RBP13.12□□□□□ -0.31
PCK1-202ENST00000467047 SKOR2Q2VWA4 1001 aaPredicted RBP13.12□□□□□ -0.31
PCK1-202ENST00000467047 VPS53Q5VIR6 699 aa13.12□□□□□ -0.31
PCK1-202ENST00000467047 ST18O60284 1047 aa13.11□□□□□ -0.31
PCK1-202ENST00000467047 GZF1Q9H116 711 aaPredicted RBP13.11□□□□□ -0.31
PCK1-202ENST00000467047 CLUAP1Q96AJ1 413 aa13.11□□□□□ -0.31
PCK1-202ENST00000467047 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.1□□□□□ -0.31
PCK1-202ENST00000467047 CREBRFQ8IUR6 639 aa13.1□□□□□ -0.31
PCK1-202ENST00000467047 VPS8Q8N3P4 1428 aa13.1□□□□□ -0.31
PCK1-202ENST00000467047 PHF14O94880 888 aa13.09□□□□□ -0.31
PCK1-202ENST00000467047 LRRFIP1Q32MZ4 808 aaKnown RBP13.09□□□□□ -0.31
PCK1-202ENST00000467047 AEBP2Q6ZN18 517 aaPredicted RBP13.09□□□□□ -0.31
PCK1-202ENST00000467047 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.09□□□□□ -0.31
PCK1-202ENST00000467047 AKAP17AQ02040 695 aaKnown RBP13.08□□□□□ -0.32
PCK1-202ENST00000467047 C1orf141Q5JVX7 400 aa13.08□□□□□ -0.32
PCK1-202ENST00000467047 PHLDB1Q86UU1 1377 aa13.08□□□□□ -0.32
PCK1-202ENST00000467047 NUTM2FA1L443 756 aa13.08□□□□□ -0.32
PCK1-202ENST00000467047 SOGA1O94964 1423 aa13.07□□□□□ -0.32
PCK1-202ENST00000467047 CPLX2Q6PUV4 134 aaKnown RBP13.07□□□□□ -0.32
PCK1-202ENST00000467047 HNRNPMP52272 730 aaKnown RBP eCLIP13.07□□□□□ -0.32
PCK1-202ENST00000467047 TEFQ10587 303 aa13.07□□□□□ -0.32
PCK1-202ENST00000467047 TPM2P07951 284 aa13.06□□□□□ -0.32
PCK1-202ENST00000467047 EVA1CP58658 441 aa13.06□□□□□ -0.32
PCK1-202ENST00000467047 NUTM2DQ5VT03 806 aaPredicted RBP13.06□□□□□ -0.32
PCK1-202ENST00000467047 NOL8Q76FK4 1167 aaKnown RBP13.06□□□□□ -0.32
PCK1-202ENST00000467047 ZNF771Q7L3S4 317 aaPredicted RBP13.06□□□□□ -0.32
PCK1-202ENST00000467047 TSR1Q2NL82 804 aaKnown RBP13.06□□□□□ -0.32
PCK1-202ENST00000467047 TDRD9Q8NDG6 1382 aaKnown RBP13.06□□□□□ -0.32
PCK1-202ENST00000467047 NEXNQ0ZGT2 675 aa13.06□□□□□ -0.32
PCK1-202ENST00000467047 SYNE3Q6ZMZ3 975 aa13.06□□□□□ -0.32
PCK1-202ENST00000467047 NOL10Q9BSC4 688 aaKnown RBP13.06□□□□□ -0.32
PCK1-202ENST00000467047 TRAK1Q9UPV9 953 aa13.06□□□□□ -0.32
PCK1-202ENST00000467047 AMOTL1Q8IY63 956 aa13.05□□□□□ -0.32
PCK1-202ENST00000467047 CCDC146Q8IYE0 955 aa13.05□□□□□ -0.32
PCK1-202ENST00000467047 COG3Q96JB2 828 aa13.05□□□□□ -0.32
PCK1-202ENST00000467047 ATP6V1DQ9Y5K8 247 aa13.05□□□□□ -0.32
PCK1-202ENST00000467047 H3BQV1 296 aa13.05□□□□□ -0.32
PCK1-202ENST00000467047 TPD52L1Q16890 204 aaPredicted RBP13.05□□□□□ -0.32
PCK1-202ENST00000467047 IFFO2Q5TF58 517 aa13.05□□□□□ -0.32
PCK1-202ENST00000467047 KANK4Q5T7N3 995 aaPredicted RBP13.04□□□□□ -0.32
PCK1-202ENST00000467047 FAM184AQ8NB25 1140 aa13.04□□□□□ -0.32
PCK1-202ENST00000467047 L3MBTL2Q969R5 705 aa13.04□□□□□ -0.32
PCK1-202ENST00000467047 ARID3AQ99856 593 aa13.04□□□□□ -0.32
PCK1-202ENST00000467047 VGFO15240 615 aaPredicted RBP13.04□□□□□ -0.32
PCK1-202ENST00000467047 RAB3GAP2Q9H2M9 1393 aa13.04□□□□□ -0.32
PCK1-202ENST00000467047 PES1O00541 588 aaKnown RBP13.04□□□□□ -0.32
PCK1-202ENST00000467047 TTC5Q8N0Z6 440 aa13.04□□□□□ -0.32
PCK1-202ENST00000467047 UBE2Q2Q8WVN8 375 aa13.04□□□□□ -0.32
PCK1-202ENST00000467047 MSH5O43196 834 aa13.03□□□□□ -0.32
PCK1-202ENST00000467047 GPS2Q13227 327 aa13.03□□□□□ -0.32
PCK1-202ENST00000467047 TRIM34Q9BYJ4 488 aa13.02□□□□□ -0.32
PCK1-202ENST00000467047 CTDP1Q9Y5B0 961 aaPredicted RBP13.02□□□□□ -0.32
PCK1-202ENST00000467047 TEX35Q5T0J7 233 aa13.02□□□□□ -0.32
PCK1-202ENST00000467047 TCEAL9Q9UHQ7 104 aa13.02□□□□□ -0.32
PCK1-202ENST00000467047 HMGB1P09429 215 aaKnown RBP13.02□□□□□ -0.33
PCK1-202ENST00000467047 TPM1P09493 284 aa13.02□□□□□ -0.33
PCK1-202ENST00000467047 FAM43AQ8N2R8 423 aa13.01□□□□□ -0.33
PCK1-202ENST00000467047 NOM1Q5C9Z4 860 aaKnown RBP13.01□□□□□ -0.33
PCK1-202ENST00000467047 RILPL2Q969X0 211 aa13.01□□□□□ -0.33
PCK1-202ENST00000467047 UACAQ9BZF9 1416 aa13.01□□□□□ -0.33
PCK1-202ENST00000467047 CCDC66A2RUB6 948 aa13.01□□□□□ -0.33
PCK1-202ENST00000467047 CGNL1Q0VF96 1302 aa13□□□□□ -0.33
PCK1-202ENST00000467047 RUFY2Q8WXA3 655 aa13□□□□□ -0.33
PCK1-202ENST00000467047 EVC2Q86UK5 1308 aa13□□□□□ -0.33
PCK1-202ENST00000467047 DIAPH3Q9NSV4 1193 aa13□□□□□ -0.33
PCK1-202ENST00000467047 FOXD4L1Q9NU39 408 aa12.99□□□□□ -0.33
PCK1-202ENST00000467047 CCDC18Q5T9S5 1454 aa12.99□□□□□ -0.33
PCK1-202ENST00000467047 BECN2A8MW95 431 aa12.99□□□□□ -0.33
PCK1-202ENST00000467047 GOLGA6L19H0YKK7 550 aa12.99□□□□□ -0.33
PCK1-202ENST00000467047 ELL2O00472 640 aaPredicted RBP12.99□□□□□ -0.33
PCK1-202ENST00000467047 CCDC47Q96A33 483 aaKnown RBP12.99□□□□□ -0.33
PCK1-202ENST00000467047 RRP9O43818 475 aaKnown RBP12.99□□□□□ -0.33
PCK1-202ENST00000467047 ZKSCAN2Q63HK3 967 aa12.99□□□□□ -0.33
PCK1-202ENST00000467047 HOMEZQ8IX15 550 aa12.99□□□□□ -0.33
PCK1-202ENST00000467047 C9orf78Q9NZ63 289 aaPredicted RBP12.99□□□□□ -0.33
PCK1-202ENST00000467047 JPH4Q96JJ6 628 aa12.98□□□□□ -0.33
PCK1-202ENST00000467047 KIF15Q9NS87 1388 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms