RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 ZC3H13Q5T200 1668 aaKnown RBP22.82■■□□□ 1.24
NPHP4-205ENST00000466897 KDM4FA0A1W2PPD8 638 aa22.82■■□□□ 1.24
NPHP4-205ENST00000466897 SETD5Q9C0A6 1442 aa22.82■■□□□ 1.24
NPHP4-205ENST00000466897 ADAMTSL3P82987 1691 aa22.81■■□□□ 1.24
NPHP4-205ENST00000466897 VWDEQ8N2E2 1590 aa22.79■■□□□ 1.24
NPHP4-205ENST00000466897 ACIN1Q9UKV3 1341 aaKnown RBP22.79■■□□□ 1.24
NPHP4-205ENST00000466897 FER1L4A9Z1Z3 1794 aa22.78■■□□□ 1.24
NPHP4-205ENST00000466897 KDM5DQ9BY66 1539 aa22.78■■□□□ 1.24
NPHP4-205ENST00000466897 KIF3BO15066 747 aa22.78■■□□□ 1.24
NPHP4-205ENST00000466897 PPP6R1Q9UPN7 881 aa22.77■■□□□ 1.24
NPHP4-205ENST00000466897 IQGAP3Q86VI3 1631 aa22.76■■□□□ 1.23
NPHP4-205ENST00000466897 MROH2AA6NES4 1674 aa22.76■■□□□ 1.23
NPHP4-205ENST00000466897 ARID4BQ4LE39 1312 aaPredicted RBP22.76■■□□□ 1.23
NPHP4-205ENST00000466897 HRCP23327 699 aa22.74■■□□□ 1.23
NPHP4-205ENST00000466897 RAB3GAP2Q9H2M9 1393 aa22.74■■□□□ 1.23
NPHP4-205ENST00000466897 CEP152O94986 1710 aa22.73■■□□□ 1.23
NPHP4-205ENST00000466897 LMTK2Q8IWU2 1503 aa22.72■■□□□ 1.23
NPHP4-205ENST00000466897 MADDQ8WXG6 1647 aa22.72■■□□□ 1.23
NPHP4-205ENST00000466897 CLTCQ00610 1675 aaKnown RBP22.71■■□□□ 1.23
NPHP4-205ENST00000466897 ABCC3O15438 1527 aa22.71■■□□□ 1.23
NPHP4-205ENST00000466897 CNTLNQ9NXG0 1405 aa22.7■■□□□ 1.22
NPHP4-205ENST00000466897 TET3O43151 1660 aa22.7■■□□□ 1.22
NPHP4-205ENST00000466897 KANK1Q14678 1352 aa22.69■■□□□ 1.22
NPHP4-205ENST00000466897 CAMSAP1Q5T5Y3 1602 aa22.68■■□□□ 1.22
NPHP4-205ENST00000466897 GGT6Q6P531 493 aa22.68■■□□□ 1.22
NPHP4-205ENST00000466897 RIMS1Q86UR5 1692 aaKnown RBP22.67■■□□□ 1.22
NPHP4-205ENST00000466897 PCGF6Q9BYE7 350 aa22.65■■□□□ 1.22
NPHP4-205ENST00000466897 EFCAB6Q5THR3 1501 aa22.65■■□□□ 1.22
NPHP4-205ENST00000466897 MLECQ14165 292 aa22.64■■□□□ 1.21
NPHP4-205ENST00000466897 NUP155O75694 1391 aa22.63■■□□□ 1.21
NPHP4-205ENST00000466897 C3P01024 1663 aa22.63■■□□□ 1.21
NPHP4-205ENST00000466897 WASHC2CQ9Y4E1 1318 aa22.61■■□□□ 1.21
NPHP4-205ENST00000466897 PZPP20742 1482 aa22.61■■□□□ 1.21
NPHP4-205ENST00000466897 ARHGAP31Q2M1Z3 1444 aa22.61■■□□□ 1.21
NPHP4-205ENST00000466897 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.6■■□□□ 1.21
NPHP4-205ENST00000466897 E9PCH4 1651 aa22.6■■□□□ 1.21
NPHP4-205ENST00000466897 RPRD2Q5VT52 1461 aaKnown RBP22.6■■□□□ 1.21
NPHP4-205ENST00000466897 ESF1Q9H501 851 aaKnown RBP22.59■■□□□ 1.21
NPHP4-205ENST00000466897 TRIM52Q96A61 297 aa22.55■■□□□ 1.2
NPHP4-205ENST00000466897 PREX1Q8TCU6 1659 aa22.55■■□□□ 1.2
NPHP4-205ENST00000466897 PTPRMP28827 1452 aa22.54■■□□□ 1.2
NPHP4-205ENST00000466897 ZMYM3Q14202 1370 aa22.54■■□□□ 1.2
NPHP4-205ENST00000466897 NPATQ14207 1427 aa22.54■■□□□ 1.2
NPHP4-205ENST00000466897 SPHKAPQ2M3C7 1700 aa22.52■■□□□ 1.2
NPHP4-205ENST00000466897 SPATA31D1Q6ZQQ2 1576 aa22.52■■□□□ 1.2
NPHP4-205ENST00000466897 CFAP65Q6ZU64 1925 aaKnown RBP22.51■■□□□ 1.19
NPHP4-205ENST00000466897 SLC4A1APQ9BWU0 796 aaKnown RBP22.49■■□□□ 1.19
NPHP4-205ENST00000466897 MPHOSPH9Q99550 1183 aa22.48■■□□□ 1.19
NPHP4-205ENST00000466897 SETD1BQ9UPS6 1966 aaKnown RBP22.48■■□□□ 1.19
NPHP4-205ENST00000466897 ERVK-7P63135 1459 aa22.47■■□□□ 1.19
NPHP4-205ENST00000466897 NOS1P29475 1434 aa22.46■■□□□ 1.19
NPHP4-205ENST00000466897 PTPRTO14522 1441 aa22.44■■□□□ 1.18
NPHP4-205ENST00000466897 TRPM2O94759 1503 aa22.44■■□□□ 1.18
NPHP4-205ENST00000466897 PIK3C2BO00750 1634 aa22.43■■□□□ 1.18
NPHP4-205ENST00000466897 SYNMO15061 1565 aa22.43■■□□□ 1.18
NPHP4-205ENST00000466897 PKD2Q13563 968 aa22.43■■□□□ 1.18
NPHP4-205ENST00000466897 MYO3AQ8NEV4 1616 aa22.41■■□□□ 1.18
NPHP4-205ENST00000466897 DHX57Q6P158 1386 aaKnown RBP22.4■■□□□ 1.18
NPHP4-205ENST00000466897 KDM5AP29375 1690 aaKnown RBP22.4■■□□□ 1.18
NPHP4-205ENST00000466897 ZNF142P52746 1687 aaPredicted RBP22.39■■□□□ 1.18
NPHP4-205ENST00000466897 CEBPAP49715 358 aaPredicted RBP22.38■■□□□ 1.17
NPHP4-205ENST00000466897 PLA2R1Q13018 1463 aa22.37■■□□□ 1.17
NPHP4-205ENST00000466897 NLRP1Q9C000 1473 aa22.37■■□□□ 1.17
NPHP4-205ENST00000466897 TNRQ92752 1358 aa22.37■■□□□ 1.17
NPHP4-205ENST00000466897 FBXO31Q5XUX0 539 aaPredicted RBP22.36■■□□□ 1.17
NPHP4-205ENST00000466897 CLTCL1P53675 1640 aa22.35■■□□□ 1.17
NPHP4-205ENST00000466897 KIF1BO60333 1816 aa22.34■■□□□ 1.17
NPHP4-205ENST00000466897 ANKRD30BQ9BXX2 1392 aa22.33■■□□□ 1.17
NPHP4-205ENST00000466897 SLC52A1Q9NWF4 448 aa22.32■■□□□ 1.16
NPHP4-205ENST00000466897 NEURL4Q96JN8 1562 aa22.31■■□□□ 1.16
NPHP4-205ENST00000466897 CEP170BQ9Y4F5 1589 aaPredicted RBP22.31■■□□□ 1.16
NPHP4-205ENST00000466897 UBR1Q8IWV7 1749 aa22.31■■□□□ 1.16
NPHP4-205ENST00000466897 UGGT1Q9NYU2 1555 aa22.3■■□□□ 1.16
NPHP4-205ENST00000466897 FOXD1Q16676 465 aa22.3■■□□□ 1.16
NPHP4-205ENST00000466897 CCDC144AA2RUR9 1427 aa22.29■■□□□ 1.16
NPHP4-205ENST00000466897 A2ML1A8K2U0 1454 aa22.28■■□□□ 1.16
NPHP4-205ENST00000466897 TMEM131LA2VDJ0 1609 aa22.28■■□□□ 1.16
NPHP4-205ENST00000466897 ADGRB3O60242 1522 aa22.28■■□□□ 1.16
NPHP4-205ENST00000466897 MYO5BQ9ULV0 1848 aa22.28■■□□□ 1.16
NPHP4-205ENST00000466897 UHRF1BP1Q6BDS2 1440 aa22.28■■□□□ 1.16
NPHP4-205ENST00000466897 CLSPNQ9HAW4 1339 aa22.26■■□□□ 1.15
NPHP4-205ENST00000466897 PLPPR3Q6T4P5 718 aa22.25■■□□□ 1.15
NPHP4-205ENST00000466897 IDI1Q13907 227 aa22.23■■□□□ 1.15
NPHP4-205ENST00000466897 LMTK3Q96Q04 1460 aa22.22■■□□□ 1.15
NPHP4-205ENST00000466897 SPATA31E1Q6ZUB1 1445 aa22.19■■□□□ 1.14
NPHP4-205ENST00000466897 IFT172Q9UG01 1749 aa22.18■■□□□ 1.14
NPHP4-205ENST00000466897 SLIT1O75093 1534 aa22.17■■□□□ 1.14
NPHP4-205ENST00000466897 PPLO60437 1756 aa22.15■■□□□ 1.14
NPHP4-205ENST00000466897 ARHGAP23Q9P227 1491 aa22.15■■□□□ 1.14
NPHP4-205ENST00000466897 POLR1AO95602 1720 aaPredicted RBP22.14■■□□□ 1.13
NPHP4-205ENST00000466897 CCER1Q8TC90 406 aaPredicted RBP22.13■■□□□ 1.13
NPHP4-205ENST00000466897 THEMISQ8N1K5 641 aaPredicted RBP22.12■■□□□ 1.13
NPHP4-205ENST00000466897 NEXMIFQ5QGS0 1516 aa22.11■■□□□ 1.13
NPHP4-205ENST00000466897 ZFYVE9O95405 1425 aa22.1■■□□□ 1.13
NPHP4-205ENST00000466897 STAG3Q9UJ98 1225 aa22.1■■□□□ 1.13
NPHP4-205ENST00000466897 TMEM2Q9UHN6 1383 aa22.1■■□□□ 1.13
NPHP4-205ENST00000466897 RPGRIP1LQ68CZ1 1315 aa22.08■■□□□ 1.13
NPHP4-205ENST00000466897 CHGAP10645 457 aaKnown RBP22.06■■□□□ 1.12
NPHP4-205ENST00000466897 SIN3AQ96ST3 1273 aa22.06■■□□□ 1.12
NPHP4-205ENST00000466897 STRCQ7RTU9 1775 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms