RNA–Protein interactions for RNA: ENST00000466881.1

PLOD3-211, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-211ENST00000466881 RRP7BPQ9NSQ0 103 aa17.9■□□□□ 0.46
PLOD3-211ENST00000466881 RAB3GAP2Q9H2M9 1393 aa17.9■□□□□ 0.46
PLOD3-211ENST00000466881 ZEB1P37275 1124 aaPredicted RBP17.89■□□□□ 0.45
PLOD3-211ENST00000466881 EFCAB2Q5VUJ9 269 aa17.89■□□□□ 0.45
PLOD3-211ENST00000466881 DNMT1P26358 1616 aaKnown RBP17.89■□□□□ 0.45
PLOD3-211ENST00000466881 ABCC5O15440 1437 aa17.89■□□□□ 0.45
PLOD3-211ENST00000466881 PLCH2O75038 1416 aa17.89■□□□□ 0.45
PLOD3-211ENST00000466881 HNRNPMP52272 730 aaKnown RBP eCLIP17.88■□□□□ 0.45
PLOD3-211ENST00000466881 FARP1Q9Y4F1 1045 aaPredicted RBP17.86■□□□□ 0.45
PLOD3-211ENST00000466881 SAMD9LQ8IVG5 1584 aa17.85■□□□□ 0.45
PLOD3-211ENST00000466881 TEX14Q8IWB6 1497 aa17.85■□□□□ 0.45
PLOD3-211ENST00000466881 RASEFQ8IZ41 740 aa17.85■□□□□ 0.45
PLOD3-211ENST00000466881 FBXO41Q8TF61 875 aa17.85■□□□□ 0.45
PLOD3-211ENST00000466881 ABCA9Q8IUA7 1624 aa17.84■□□□□ 0.45
PLOD3-211ENST00000466881 COL17A1Q9UMD9 1497 aaPredicted RBP17.84■□□□□ 0.45
PLOD3-211ENST00000466881 TSPY4P0CV99 314 aa17.84■□□□□ 0.45
PLOD3-211ENST00000466881 TSPY10P0CW01 314 aa17.84■□□□□ 0.45
PLOD3-211ENST00000466881 HFM1A2PYH4 1435 aa17.83■□□□□ 0.45
PLOD3-211ENST00000466881 MAP3K4Q9Y6R4 1608 aa17.83■□□□□ 0.44
PLOD3-211ENST00000466881 PLEKHH2Q8IVE3 1493 aa17.82■□□□□ 0.44
PLOD3-211ENST00000466881 RSPH4AQ5TD94 716 aa17.82■□□□□ 0.44
PLOD3-211ENST00000466881 NAIPQ13075 1403 aa17.81■□□□□ 0.44
PLOD3-211ENST00000466881 AKNAQ7Z591 1439 aa17.81■□□□□ 0.44
PLOD3-211ENST00000466881 ROCK1Q13464 1354 aa17.8■□□□□ 0.44
PLOD3-211ENST00000466881 CIZ1Q9ULV3 898 aaPredicted RBP17.8■□□□□ 0.44
PLOD3-211ENST00000466881 ARHGEF5Q12774 1597 aa17.79■□□□□ 0.44
PLOD3-211ENST00000466881 SYCP2Q9BX26 1530 aa17.79■□□□□ 0.44
PLOD3-211ENST00000466881 CROCC2H7BZ55 1655 aa17.79■□□□□ 0.44
PLOD3-211ENST00000466881 ANKRD30AQ9BXX3 1397 aa17.79■□□□□ 0.44
PLOD3-211ENST00000466881 ARAP3Q8WWN8 1544 aa17.78■□□□□ 0.44
PLOD3-211ENST00000466881 CCDC141Q6ZP82 1450 aa17.78■□□□□ 0.44
PLOD3-211ENST00000466881 CD109Q6YHK3 1445 aa17.78■□□□□ 0.44
PLOD3-211ENST00000466881 DHX57Q6P158 1386 aaKnown RBP17.78■□□□□ 0.44
PLOD3-211ENST00000466881 ADGBQ8N7X0 1667 aa17.77■□□□□ 0.44
PLOD3-211ENST00000466881 FANCAO15360 1455 aa17.77■□□□□ 0.44
PLOD3-211ENST00000466881 MBD5Q9P267 1494 aa17.77■□□□□ 0.44
PLOD3-211ENST00000466881 C9orf84Q5VXU9 1444 aa17.77■□□□□ 0.44
PLOD3-211ENST00000466881 KIAA1107Q9UPP5 1409 aa17.77■□□□□ 0.44
PLOD3-211ENST00000466881 GCC2Q8IWJ2 1684 aa17.77■□□□□ 0.43
PLOD3-211ENST00000466881 TRIM52Q96A61 297 aa17.75■□□□□ 0.43
PLOD3-211ENST00000466881 SHANK2Q9UPX8 1470 aa17.75■□□□□ 0.43
PLOD3-211ENST00000466881 NCOA1Q15788 1441 aa17.74■□□□□ 0.43
PLOD3-211ENST00000466881 ECM2O94769 699 aaPredicted RBP17.74■□□□□ 0.43
PLOD3-211ENST00000466881 ABCC1P33527 1531 aa17.73■□□□□ 0.43
PLOD3-211ENST00000466881 ADGRL2O95490 1459 aa17.72■□□□□ 0.43
PLOD3-211ENST00000466881 ARHGEF12Q9NZN5 1544 aa17.72■□□□□ 0.43
PLOD3-211ENST00000466881 MYT1LQ9UL68 1186 aa17.71■□□□□ 0.43
PLOD3-211ENST00000466881 FAM212AQ96EL1 285 aa17.7■□□□□ 0.42
PLOD3-211ENST00000466881 SCAPERQ9BY12 1400 aa17.7■□□□□ 0.42
PLOD3-211ENST00000466881 GSE1Q14687 1217 aa17.69■□□□□ 0.42
PLOD3-211ENST00000466881 DCAF8Q5TAQ9 597 aa17.69■□□□□ 0.42
PLOD3-211ENST00000466881 TRAPPC8Q9Y2L5 1435 aa17.69■□□□□ 0.42
PLOD3-211ENST00000466881 CFAP74Q9C0B2 1584 aa17.69■□□□□ 0.42
PLOD3-211ENST00000466881 CLSPNQ9HAW4 1339 aa17.69■□□□□ 0.42
PLOD3-211ENST00000466881 ACIN1Q9UKV3 1341 aaKnown RBP17.69■□□□□ 0.42
PLOD3-211ENST00000466881 AFAP1Q8N556 730 aa17.68■□□□□ 0.42
PLOD3-211ENST00000466881 SPAG9O60271 1321 aaKnown RBP17.68■□□□□ 0.42
PLOD3-211ENST00000466881 KIF15Q9NS87 1388 aa17.67■□□□□ 0.42
PLOD3-211ENST00000466881 RGL2O15211 777 aa17.67■□□□□ 0.42
PLOD3-211ENST00000466881 MAST1Q9Y2H9 1570 aa17.66■□□□□ 0.42
PLOD3-211ENST00000466881 ANKRD50Q9ULJ7 1429 aa17.65■□□□□ 0.42
PLOD3-211ENST00000466881 LMTK3Q96Q04 1460 aa17.63■□□□□ 0.41
PLOD3-211ENST00000466881 NEO1Q92859 1461 aa17.62■□□□□ 0.41
PLOD3-211ENST00000466881 RNF25Q96BH1 459 aaPredicted RBP17.6■□□□□ 0.41
PLOD3-211ENST00000466881 MPHOSPH9Q99550 1183 aa17.6■□□□□ 0.41
PLOD3-211ENST00000466881 PLXNC1O60486 1568 aa17.59■□□□□ 0.41
PLOD3-211ENST00000466881 RTEL1-TNFRSF6BF6WH68 1400 aa17.59■□□□□ 0.41
PLOD3-211ENST00000466881 ZNF518AQ6AHZ1 1483 aa17.58■□□□□ 0.41
PLOD3-211ENST00000466881 TSPYL2Q9H2G4 693 aaPredicted RBP17.58■□□□□ 0.4
PLOD3-211ENST00000466881 NEUROD1Q13562 356 aa17.57■□□□□ 0.4
PLOD3-211ENST00000466881 ATP7AQ04656 1500 aa17.57■□□□□ 0.4
PLOD3-211ENST00000466881 DUOX2Q9NRD8 1548 aa17.57■□□□□ 0.4
PLOD3-211ENST00000466881 DENND4BO75064 1496 aaPredicted RBP17.56■□□□□ 0.4
PLOD3-211ENST00000466881 PTPRMP28827 1452 aa17.56■□□□□ 0.4
PLOD3-211ENST00000466881 POGZQ7Z3K3 1410 aa17.55■□□□□ 0.4
PLOD3-211ENST00000466881 NUP155O75694 1391 aa17.55■□□□□ 0.4
PLOD3-211ENST00000466881 ZFYVE16Q7Z3T8 1539 aa17.55■□□□□ 0.4
PLOD3-211ENST00000466881 RAPGEF3O95398 923 aa17.54■□□□□ 0.4
PLOD3-211ENST00000466881 SIN3AQ96ST3 1273 aa17.54■□□□□ 0.4
PLOD3-211ENST00000466881 INO80Q9ULG1 1556 aaPredicted RBP17.53■□□□□ 0.4
PLOD3-211ENST00000466881 ADAMTSL3P82987 1691 aa17.52■□□□□ 0.4
PLOD3-211ENST00000466881 CCDC61Q9Y6R9 512 aa17.52■□□□□ 0.4
PLOD3-211ENST00000466881 ERBINQ96RT1 1412 aa17.51■□□□□ 0.39
PLOD3-211ENST00000466881 PYGBP11216 843 aa17.5■□□□□ 0.39
PLOD3-211ENST00000466881 CHRM1P11229 460 aaPredicted RBP17.5■□□□□ 0.39
PLOD3-211ENST00000466881 PZPP20742 1482 aa17.49■□□□□ 0.39
PLOD3-211ENST00000466881 KDM5CP41229 1560 aa17.48■□□□□ 0.39
PLOD3-211ENST00000466881 KIDINS220Q9ULH0 1771 aa17.48■□□□□ 0.39
PLOD3-211ENST00000466881 MLH3Q9UHC1 1453 aa17.47■□□□□ 0.39
PLOD3-211ENST00000466881 DHX29Q7Z478 1369 aaKnown RBP17.46■□□□□ 0.39
PLOD3-211ENST00000466881 KIF3BO15066 747 aa17.46■□□□□ 0.39
PLOD3-211ENST00000466881 MADDQ8WXG6 1647 aa17.45■□□□□ 0.38
PLOD3-211ENST00000466881 RICTORQ6R327 1708 aa17.44■□□□□ 0.38
PLOD3-211ENST00000466881 KDM5DQ9BY66 1539 aa17.44■□□□□ 0.38
PLOD3-211ENST00000466881 UNC13BO14795 1591 aa17.44■□□□□ 0.38
PLOD3-211ENST00000466881 BCORL1Q5H9F3 1711 aa17.44■□□□□ 0.38
PLOD3-211ENST00000466881 A2MP01023 1474 aa17.44■□□□□ 0.38
PLOD3-211ENST00000466881 CD44P16070 742 aaKnown RBP17.43■□□□□ 0.38
PLOD3-211ENST00000466881 TONSLQ96HA7 1378 aa17.42■□□□□ 0.38
PLOD3-211ENST00000466881 C19orf67A6NJJ6 358 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms