RNA–Protein interactions for RNA: ENST00000466636.1

SRPRB-202, Transcript of SRP receptor subunit beta, humanhuman

TSL 3

Gene SRPRB, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-202ENST00000466636 FOXD4L1Q9NU39 408 aa13.88□□□□□ -0.19
SRPRB-202ENST00000466636 ATP7AQ04656 1500 aa13.88□□□□□ -0.19
SRPRB-202ENST00000466636 NUP155O75694 1391 aa13.87□□□□□ -0.19
SRPRB-202ENST00000466636 ANKRD30BQ9BXX2 1392 aa13.87□□□□□ -0.19
SRPRB-202ENST00000466636 FAM69CQ0P6D2 419 aa13.87□□□□□ -0.19
SRPRB-202ENST00000466636 NEUROD1Q13562 356 aa13.87□□□□□ -0.19
SRPRB-202ENST00000466636 KDM5CP41229 1560 aa13.86□□□□□ -0.19
SRPRB-202ENST00000466636 UNC13BO14795 1591 aa13.85□□□□□ -0.19
SRPRB-202ENST00000466636 MAGI2Q86UL8 1455 aa13.85□□□□□ -0.19
SRPRB-202ENST00000466636 MLH3Q9UHC1 1453 aa13.84□□□□□ -0.19
SRPRB-202ENST00000466636 FAM135AQ9P2D6 1515 aa13.82□□□□□ -0.2
SRPRB-202ENST00000466636 PKD2Q13563 968 aa13.82□□□□□ -0.2
SRPRB-202ENST00000466636 DHX29Q7Z478 1369 aaKnown RBP13.82□□□□□ -0.2
SRPRB-202ENST00000466636 TONSLQ96HA7 1378 aa13.82□□□□□ -0.2
SRPRB-202ENST00000466636 RPRD2Q5VT52 1461 aaKnown RBP13.8□□□□□ -0.2
SRPRB-202ENST00000466636 KIDINS220Q9ULH0 1771 aa13.79□□□□□ -0.2
SRPRB-202ENST00000466636 PPP1R15AO75807 674 aaPredicted RBP13.79□□□□□ -0.2
SRPRB-202ENST00000466636 TEX14Q8IWB6 1497 aa13.79□□□□□ -0.2
SRPRB-202ENST00000466636 HECW2Q9P2P5 1572 aa13.79□□□□□ -0.2
SRPRB-202ENST00000466636 RAPGEF3O95398 923 aa13.78□□□□□ -0.2
SRPRB-202ENST00000466636 A2MP01023 1474 aa13.78□□□□□ -0.2
SRPRB-202ENST00000466636 IQGAP3Q86VI3 1631 aa13.78□□□□□ -0.2
SRPRB-202ENST00000466636 PPRC1Q5VV67 1664 aaKnown RBP13.78□□□□□ -0.2
SRPRB-202ENST00000466636 MYT1LQ9UL68 1186 aa13.77□□□□□ -0.21
SRPRB-202ENST00000466636 EIF2AK4Q9P2K8 1649 aaKnown RBP13.76□□□□□ -0.21
SRPRB-202ENST00000466636 FRMPD1Q5SYB0 1578 aa13.76□□□□□ -0.21
SRPRB-202ENST00000466636 ZNF316A6NFI3 1004 aaPredicted RBP13.76□□□□□ -0.21
SRPRB-202ENST00000466636 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.76□□□□□ -0.21
SRPRB-202ENST00000466636 DEPDC5O75140 1603 aa13.75□□□□□ -0.21
SRPRB-202ENST00000466636 VWDEQ8N2E2 1590 aa13.75□□□□□ -0.21
SRPRB-202ENST00000466636 ZMYM4Q5VZL5 1548 aa13.74□□□□□ -0.21
SRPRB-202ENST00000466636 RICTORQ6R327 1708 aa13.74□□□□□ -0.21
SRPRB-202ENST00000466636 ABCA6Q8N139 1617 aa13.74□□□□□ -0.21
SRPRB-202ENST00000466636 MROH1Q8NDA8 1641 aa13.73□□□□□ -0.21
SRPRB-202ENST00000466636 KIF3BO15066 747 aa13.73□□□□□ -0.21
SRPRB-202ENST00000466636 DIP2CQ9Y2E4 1556 aa13.73□□□□□ -0.21
SRPRB-202ENST00000466636 PRDM15P57071 1507 aaPredicted RBP13.73□□□□□ -0.21
SRPRB-202ENST00000466636 PLA2R1Q13018 1463 aa13.73□□□□□ -0.21
SRPRB-202ENST00000466636 HOXD11P31277 338 aaPredicted RBP13.72□□□□□ -0.21
SRPRB-202ENST00000466636 L3MBTL2Q969R5 705 aa13.72□□□□□ -0.21
SRPRB-202ENST00000466636 YEATS2Q9ULM3 1422 aa13.72□□□□□ -0.21
SRPRB-202ENST00000466636 ATP10AO60312 1499 aa13.71□□□□□ -0.21
SRPRB-202ENST00000466636 KIF13AQ9H1H9 1805 aa13.71□□□□□ -0.22
SRPRB-202ENST00000466636 KANK1Q14678 1352 aa13.71□□□□□ -0.22
SRPRB-202ENST00000466636 RNF17Q9BXT8 1623 aaKnown RBP13.7□□□□□ -0.22
SRPRB-202ENST00000466636 COL17A1Q9UMD9 1497 aaPredicted RBP13.69□□□□□ -0.22
SRPRB-202ENST00000466636 LMTK2Q8IWU2 1503 aa13.69□□□□□ -0.22
SRPRB-202ENST00000466636 BCORL1Q5H9F3 1711 aa13.68□□□□□ -0.22
SRPRB-202ENST00000466636 PTPRTO14522 1441 aa13.66□□□□□ -0.22
SRPRB-202ENST00000466636 TET3O43151 1660 aa13.66□□□□□ -0.22
SRPRB-202ENST00000466636 CCDC144AA2RUR9 1427 aa13.65□□□□□ -0.22
SRPRB-202ENST00000466636 TSPOAP1O95153 1857 aa13.64□□□□□ -0.23
SRPRB-202ENST00000466636 E9PCH4 1651 aa13.63□□□□□ -0.23
SRPRB-202ENST00000466636 REREQ9P2R6 1566 aa13.63□□□□□ -0.23
SRPRB-202ENST00000466636 NBPF8Q3BBV2 869 aa13.63□□□□□ -0.23
SRPRB-202ENST00000466636 TRPM2O94759 1503 aa13.63□□□□□ -0.23
SRPRB-202ENST00000466636 EFCAB6Q5THR3 1501 aa13.63□□□□□ -0.23
SRPRB-202ENST00000466636 ABCC3O15438 1527 aa13.62□□□□□ -0.23
SRPRB-202ENST00000466636 AGLP35573 1532 aa13.61□□□□□ -0.23
SRPRB-202ENST00000466636 GGT6Q6P531 493 aa13.61□□□□□ -0.23
SRPRB-202ENST00000466636 UHRF1BP1Q6BDS2 1440 aa13.61□□□□□ -0.23
SRPRB-202ENST00000466636 ARHGEF40Q8TER5 1519 aa13.59□□□□□ -0.23
SRPRB-202ENST00000466636 SPATA31E1Q6ZUB1 1445 aa13.59□□□□□ -0.23
SRPRB-202ENST00000466636 NPATQ14207 1427 aa13.58□□□□□ -0.24
SRPRB-202ENST00000466636 DIEXFQ68CQ4 756 aaKnown RBP13.58□□□□□ -0.24
SRPRB-202ENST00000466636 WASHC2CQ9Y4E1 1318 aa13.57□□□□□ -0.24
SRPRB-202ENST00000466636 ARHGAP31Q2M1Z3 1444 aa13.56□□□□□ -0.24
SRPRB-202ENST00000466636 CLTCL1P53675 1640 aa13.55□□□□□ -0.24
SRPRB-202ENST00000466636 DCAF8L1A6NGE4 600 aa13.55□□□□□ -0.24
SRPRB-202ENST00000466636 CEP152O94986 1710 aa13.55□□□□□ -0.24
SRPRB-202ENST00000466636 SPHKAPQ2M3C7 1700 aa13.55□□□□□ -0.24
SRPRB-202ENST00000466636 RALGAPBQ86X10 1494 aa13.55□□□□□ -0.24
SRPRB-202ENST00000466636 SLC4A2P04920 1241 aa13.54□□□□□ -0.24
SRPRB-202ENST00000466636 DCAF11Q8TEB1 546 aa13.54□□□□□ -0.24
SRPRB-202ENST00000466636 RNF39Q9H2S5 420 aa13.54□□□□□ -0.24
SRPRB-202ENST00000466636 NOS1P29475 1434 aa13.54□□□□□ -0.24
SRPRB-202ENST00000466636 CNTLNQ9NXG0 1405 aa13.54□□□□□ -0.24
SRPRB-202ENST00000466636 NEURL4Q96JN8 1562 aa13.54□□□□□ -0.24
SRPRB-202ENST00000466636 TRHP20396 242 aaPredicted RBP13.53□□□□□ -0.24
SRPRB-202ENST00000466636 PRAG1Q86YV5 1406 aa13.53□□□□□ -0.24
SRPRB-202ENST00000466636 CAMSAP1Q5T5Y3 1602 aa13.53□□□□□ -0.24
SRPRB-202ENST00000466636 ZC3H13Q5T200 1668 aaKnown RBP13.53□□□□□ -0.24
SRPRB-202ENST00000466636 HSPA5P11021 654 aaKnown RBP13.52□□□□□ -0.25
SRPRB-202ENST00000466636 RGL3Q3MIN7 710 aa13.52□□□□□ -0.25
SRPRB-202ENST00000466636 UGGT1Q9NYU2 1555 aa13.52□□□□□ -0.25
SRPRB-202ENST00000466636 SIGLEC1Q9BZZ2 1709 aa13.51□□□□□ -0.25
SRPRB-202ENST00000466636 EIF4G2P78344 907 aaKnown RBP eCLIP13.51□□□□□ -0.25
SRPRB-202ENST00000466636 KDM2AQ9Y2K7 1162 aa13.51□□□□□ -0.25
SRPRB-202ENST00000466636 ZNF326Q5BKZ1 582 aaKnown RBP13.5□□□□□ -0.25
SRPRB-202ENST00000466636 HIRIP3Q9BW71 556 aaPredicted RBP13.5□□□□□ -0.25
SRPRB-202ENST00000466636 STAC3Q96MF2 364 aa13.48□□□□□ -0.25
SRPRB-202ENST00000466636 ADGRB3O60242 1522 aa13.48□□□□□ -0.25
SRPRB-202ENST00000466636 SYNMO15061 1565 aa13.47□□□□□ -0.25
SRPRB-202ENST00000466636 GPRASP1Q5JY77 1395 aa13.46□□□□□ -0.25
SRPRB-202ENST00000466636 USP47Q96K76 1375 aa13.45□□□□□ -0.26
SRPRB-202ENST00000466636 MYOM2P54296 1465 aa13.45□□□□□ -0.26
SRPRB-202ENST00000466636 PIK3C2BO00750 1634 aa13.45□□□□□ -0.26
SRPRB-202ENST00000466636 ERVK-7P63135 1459 aa13.44□□□□□ -0.26
SRPRB-202ENST00000466636 ROCK2O75116 1388 aaKnown RBP13.44□□□□□ -0.26
SRPRB-202ENST00000466636 TRPM1Q7Z4N2 1603 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms