RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 DHX29Q7Z478 1369 aaKnown RBP22.21■■□□□ 1.15
SNED1-208ENST00000466618 DUOX2Q9NRD8 1548 aa22.21■■□□□ 1.15
SNED1-208ENST00000466618 ARHGEF40Q8TER5 1519 aa22.2■■□□□ 1.14
SNED1-208ENST00000466618 SETD5Q9C0A6 1442 aa22.2■■□□□ 1.14
SNED1-208ENST00000466618 ATP10AO60312 1499 aa22.19■■□□□ 1.14
SNED1-208ENST00000466618 A2MP01023 1474 aa22.19■■□□□ 1.14
SNED1-208ENST00000466618 ANKRD50Q9ULJ7 1429 aa22.18■■□□□ 1.14
SNED1-208ENST00000466618 ERBINQ96RT1 1412 aa22.17■■□□□ 1.14
SNED1-208ENST00000466618 GCC2Q8IWJ2 1684 aa22.17■■□□□ 1.14
SNED1-208ENST00000466618 REREQ9P2R6 1566 aa22.16■■□□□ 1.14
SNED1-208ENST00000466618 RAB3GAP2Q9H2M9 1393 aa22.14■■□□□ 1.13
SNED1-208ENST00000466618 AGLP35573 1532 aa22.09■■□□□ 1.13
SNED1-208ENST00000466618 EIF2AK4Q9P2K8 1649 aaKnown RBP22.08■■□□□ 1.12
SNED1-208ENST00000466618 SIGLEC1Q9BZZ2 1709 aa22.07■■□□□ 1.12
SNED1-208ENST00000466618 BCORL1Q5H9F3 1711 aa22.06■■□□□ 1.12
SNED1-208ENST00000466618 KIF3BO15066 747 aa22.06■■□□□ 1.12
SNED1-208ENST00000466618 DEPDC5O75140 1603 aa22.01■■□□□ 1.11
SNED1-208ENST00000466618 RNF17Q9BXT8 1623 aaKnown RBP22.01■■□□□ 1.11
SNED1-208ENST00000466618 UNC13BO14795 1591 aa22■■□□□ 1.11
SNED1-208ENST00000466618 MROH1Q8NDA8 1641 aa22■■□□□ 1.11
SNED1-208ENST00000466618 PRDM15P57071 1507 aaPredicted RBP21.98■■□□□ 1.11
SNED1-208ENST00000466618 KDM5DQ9BY66 1539 aa21.97■■□□□ 1.11
SNED1-208ENST00000466618 NUP155O75694 1391 aa21.97■■□□□ 1.11
SNED1-208ENST00000466618 GGT6Q6P531 493 aa21.97■■□□□ 1.11
SNED1-208ENST00000466618 VWDEQ8N2E2 1590 aa21.96■■□□□ 1.11
SNED1-208ENST00000466618 ARID4BQ4LE39 1312 aaPredicted RBP21.95■■□□□ 1.1
SNED1-208ENST00000466618 TRIM52Q96A61 297 aa21.95■■□□□ 1.1
SNED1-208ENST00000466618 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.95■■□□□ 1.1
SNED1-208ENST00000466618 PPP6R1Q9UPN7 881 aa21.94■■□□□ 1.1
SNED1-208ENST00000466618 PZPP20742 1482 aa21.93■■□□□ 1.1
SNED1-208ENST00000466618 KANK1Q14678 1352 aa21.91■■□□□ 1.1
SNED1-208ENST00000466618 FAM135AQ9P2D6 1515 aa21.9■■□□□ 1.1
SNED1-208ENST00000466618 IQGAP3Q86VI3 1631 aa21.9■■□□□ 1.1
SNED1-208ENST00000466618 MLECQ14165 292 aa21.9■■□□□ 1.1
SNED1-208ENST00000466618 LMTK2Q8IWU2 1503 aa21.9■■□□□ 1.1
SNED1-208ENST00000466618 MPHOSPH9Q99550 1183 aa21.89■■□□□ 1.09
SNED1-208ENST00000466618 DHX57Q6P158 1386 aaKnown RBP21.88■■□□□ 1.09
SNED1-208ENST00000466618 ABCC3O15438 1527 aa21.88■■□□□ 1.09
SNED1-208ENST00000466618 WASHC2CQ9Y4E1 1318 aa21.88■■□□□ 1.09
SNED1-208ENST00000466618 SLC4A1APQ9BWU0 796 aaKnown RBP21.87■■□□□ 1.09
SNED1-208ENST00000466618 ZC3H13Q5T200 1668 aaKnown RBP21.82■■□□□ 1.08
SNED1-208ENST00000466618 PKD2Q13563 968 aa21.81■■□□□ 1.08
SNED1-208ENST00000466618 ARHGAP31Q2M1Z3 1444 aa21.8■■□□□ 1.08
SNED1-208ENST00000466618 CNTLNQ9NXG0 1405 aa21.8■■□□□ 1.08
SNED1-208ENST00000466618 TET3O43151 1660 aa21.8■■□□□ 1.08
SNED1-208ENST00000466618 EFCAB6Q5THR3 1501 aa21.8■■□□□ 1.08
SNED1-208ENST00000466618 CEP152O94986 1710 aa21.79■■□□□ 1.08
SNED1-208ENST00000466618 ADAMTSL3P82987 1691 aa21.79■■□□□ 1.08
SNED1-208ENST00000466618 NPATQ14207 1427 aa21.78■■□□□ 1.08
SNED1-208ENST00000466618 FOXD1Q16676 465 aa21.77■■□□□ 1.07
SNED1-208ENST00000466618 CAMSAP1Q5T5Y3 1602 aa21.76■■□□□ 1.07
SNED1-208ENST00000466618 CLTCQ00610 1675 aaKnown RBP21.76■■□□□ 1.07
SNED1-208ENST00000466618 ESF1Q9H501 851 aaKnown RBP21.76■■□□□ 1.07
SNED1-208ENST00000466618 ZMYM3Q14202 1370 aa21.76■■□□□ 1.07
SNED1-208ENST00000466618 RPRD2Q5VT52 1461 aaKnown RBP21.76■■□□□ 1.07
SNED1-208ENST00000466618 E9PCH4 1651 aa21.74■■□□□ 1.07
SNED1-208ENST00000466618 MADDQ8WXG6 1647 aa21.74■■□□□ 1.07
SNED1-208ENST00000466618 MROH2AA6NES4 1674 aa21.72■■□□□ 1.07
SNED1-208ENST00000466618 ANKRD30BQ9BXX2 1392 aa21.72■■□□□ 1.07
SNED1-208ENST00000466618 PTPRTO14522 1441 aa21.72■■□□□ 1.07
SNED1-208ENST00000466618 FER1L4A9Z1Z3 1794 aa21.72■■□□□ 1.07
SNED1-208ENST00000466618 PLA2R1Q13018 1463 aa21.72■■□□□ 1.07
SNED1-208ENST00000466618 NOS1P29475 1434 aa21.69■■□□□ 1.06
SNED1-208ENST00000466618 KDM4FA0A1W2PPD8 638 aa21.68■■□□□ 1.06
SNED1-208ENST00000466618 FBXO31Q5XUX0 539 aaPredicted RBP21.68■■□□□ 1.06
SNED1-208ENST00000466618 BCANQ96GW7 911 aa21.68■■□□□ 1.06
SNED1-208ENST00000466618 ERVK-7P63135 1459 aa21.66■■□□□ 1.06
SNED1-208ENST00000466618 CEBPAP49715 358 aaPredicted RBP21.66■■□□□ 1.06
SNED1-208ENST00000466618 RBM19Q9Y4C8 960 aaKnown RBP21.66■■□□□ 1.06
SNED1-208ENST00000466618 RIMS1Q86UR5 1692 aaKnown RBP21.65■■□□□ 1.06
SNED1-208ENST00000466618 SPATA31D1Q6ZQQ2 1576 aa21.65■■□□□ 1.06
SNED1-208ENST00000466618 TRPM2O94759 1503 aa21.64■■□□□ 1.05
SNED1-208ENST00000466618 C3P01024 1663 aa21.64■■□□□ 1.05
SNED1-208ENST00000466618 PTPRMP28827 1452 aa21.63■■□□□ 1.05
SNED1-208ENST00000466618 PREX1Q8TCU6 1659 aa21.62■■□□□ 1.05
SNED1-208ENST00000466618 SYNMO15061 1565 aa21.62■■□□□ 1.05
SNED1-208ENST00000466618 SPHKAPQ2M3C7 1700 aa21.61■■□□□ 1.05
SNED1-208ENST00000466618 FKBP8Q14318 412 aa21.61■■□□□ 1.05
SNED1-208ENST00000466618 SIN3AQ96ST3 1273 aa21.58■■□□□ 1.05
SNED1-208ENST00000466618 CCDC144AA2RUR9 1427 aa21.58■■□□□ 1.04
SNED1-208ENST00000466618 SLC52A1Q9NWF4 448 aa21.57■■□□□ 1.04
SNED1-208ENST00000466618 TNRQ92752 1358 aa21.57■■□□□ 1.04
SNED1-208ENST00000466618 UGGT1Q9NYU2 1555 aa21.56■■□□□ 1.04
SNED1-208ENST00000466618 PIK3C2BO00750 1634 aa21.56■■□□□ 1.04
SNED1-208ENST00000466618 IDI1Q13907 227 aa21.55■■□□□ 1.04
SNED1-208ENST00000466618 CLTCL1P53675 1640 aa21.55■■□□□ 1.04
SNED1-208ENST00000466618 MSH5O43196 834 aa21.53■■□□□ 1.04
SNED1-208ENST00000466618 PLPPR3Q6T4P5 718 aa21.53■■□□□ 1.04
SNED1-208ENST00000466618 CFAP65Q6ZU64 1925 aaKnown RBP21.51■■□□□ 1.03
SNED1-208ENST00000466618 NLRP1Q9C000 1473 aa21.5■■□□□ 1.03
SNED1-208ENST00000466618 SPATA31E1Q6ZUB1 1445 aa21.5■■□□□ 1.03
SNED1-208ENST00000466618 NEURL4Q96JN8 1562 aa21.47■■□□□ 1.03
SNED1-208ENST00000466618 ADGRB3O60242 1522 aa21.45■■□□□ 1.02
SNED1-208ENST00000466618 MYO3AQ8NEV4 1616 aa21.44■■□□□ 1.02
SNED1-208ENST00000466618 TMEM131LA2VDJ0 1609 aa21.43■■□□□ 1.02
SNED1-208ENST00000466618 TIMELESSQ9UNS1 1208 aa21.43■■□□□ 1.02
SNED1-208ENST00000466618 A2ML1A8K2U0 1454 aa21.42■■□□□ 1.02
SNED1-208ENST00000466618 PRKCSHP14314 528 aaPredicted RBP21.41■■□□□ 1.02
SNED1-208ENST00000466618 CHGAP10645 457 aaKnown RBP21.4■■□□□ 1.02
SNED1-208ENST00000466618 RGL3Q3MIN7 710 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms