RNA–Protein interactions for RNA: ENST00000466541.1

SHROOM3-202, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 628 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-202ENST00000466541 WASHC2CQ9Y4E1 1318 aa18.28■□□□□ 0.52
SHROOM3-202ENST00000466541 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.27■□□□□ 0.51
SHROOM3-202ENST00000466541 EIF2AK4Q9P2K8 1649 aaKnown RBP18.27■□□□□ 0.51
SHROOM3-202ENST00000466541 ADGRL2O95490 1459 aa18.26■□□□□ 0.51
SHROOM3-202ENST00000466541 CNTLNQ9NXG0 1405 aa18.26■□□□□ 0.51
SHROOM3-202ENST00000466541 ZMYM3Q14202 1370 aa18.26■□□□□ 0.51
SHROOM3-202ENST00000466541 ERBINQ96RT1 1412 aa18.24■□□□□ 0.51
SHROOM3-202ENST00000466541 PPP6R1Q9UPN7 881 aa18.24■□□□□ 0.51
SHROOM3-202ENST00000466541 RNF17Q9BXT8 1623 aaKnown RBP18.23■□□□□ 0.51
SHROOM3-202ENST00000466541 MROH2AA6NES4 1674 aa18.22■□□□□ 0.51
SHROOM3-202ENST00000466541 KDM5DQ9BY66 1539 aa18.22■□□□□ 0.51
SHROOM3-202ENST00000466541 ANKRD50Q9ULJ7 1429 aa18.22■□□□□ 0.51
SHROOM3-202ENST00000466541 CFAP65Q6ZU64 1925 aaKnown RBP18.21■□□□□ 0.51
SHROOM3-202ENST00000466541 CEP152O94986 1710 aa18.21■□□□□ 0.51
SHROOM3-202ENST00000466541 ROCK1Q13464 1354 aa18.2■□□□□ 0.5
SHROOM3-202ENST00000466541 MROH1Q8NDA8 1641 aa18.2■□□□□ 0.5
SHROOM3-202ENST00000466541 KANK1Q14678 1352 aa18.18■□□□□ 0.5
SHROOM3-202ENST00000466541 HSPA2P54652 639 aa18.17■□□□□ 0.5
SHROOM3-202ENST00000466541 FBXO31Q5XUX0 539 aaPredicted RBP18.17■□□□□ 0.5
SHROOM3-202ENST00000466541 ABCC3O15438 1527 aa18.17■□□□□ 0.5
SHROOM3-202ENST00000466541 SETD1BQ9UPS6 1966 aaKnown RBP18.17■□□□□ 0.5
SHROOM3-202ENST00000466541 PREX1Q8TCU6 1659 aa18.16■□□□□ 0.5
SHROOM3-202ENST00000466541 DEPDC5O75140 1603 aa18.15■□□□□ 0.5
SHROOM3-202ENST00000466541 ZC3H13Q5T200 1668 aaKnown RBP18.15■□□□□ 0.5
SHROOM3-202ENST00000466541 PRDM15P57071 1507 aaPredicted RBP18.14■□□□□ 0.49
SHROOM3-202ENST00000466541 LMTK3Q96Q04 1460 aa18.14■□□□□ 0.49
SHROOM3-202ENST00000466541 CAMSAP1Q5T5Y3 1602 aa18.13■□□□□ 0.49
SHROOM3-202ENST00000466541 UHRF1BP1Q6BDS2 1440 aa18.13■□□□□ 0.49
SHROOM3-202ENST00000466541 FAM135AQ9P2D6 1515 aa18.13■□□□□ 0.49
SHROOM3-202ENST00000466541 PZPP20742 1482 aa18.11■□□□□ 0.49
SHROOM3-202ENST00000466541 NPATQ14207 1427 aa18.1■□□□□ 0.49
SHROOM3-202ENST00000466541 NAIPQ13075 1403 aa18.09■□□□□ 0.49
SHROOM3-202ENST00000466541 GCC2Q8IWJ2 1684 aa18.09■□□□□ 0.49
SHROOM3-202ENST00000466541 TNRQ92752 1358 aa18.08■□□□□ 0.49
SHROOM3-202ENST00000466541 MYO3AQ8NEV4 1616 aa18.08■□□□□ 0.48
SHROOM3-202ENST00000466541 NUP155O75694 1391 aa18.07■□□□□ 0.48
SHROOM3-202ENST00000466541 TRIM52Q96A61 297 aa18.07■□□□□ 0.48
SHROOM3-202ENST00000466541 UNC13BO14795 1591 aa18.07■□□□□ 0.48
SHROOM3-202ENST00000466541 VWDEQ8N2E2 1590 aa18.05■□□□□ 0.48
SHROOM3-202ENST00000466541 HFM1A2PYH4 1435 aa18.05■□□□□ 0.48
SHROOM3-202ENST00000466541 ERVK-7P63135 1459 aa18.03■□□□□ 0.48
SHROOM3-202ENST00000466541 EFCAB6Q5THR3 1501 aa18.02■□□□□ 0.47
SHROOM3-202ENST00000466541 LMTK2Q8IWU2 1503 aa18.02■□□□□ 0.47
SHROOM3-202ENST00000466541 CEP170BQ9Y4F5 1589 aaPredicted RBP18.01■□□□□ 0.47
SHROOM3-202ENST00000466541 TET3O43151 1660 aa18.01■□□□□ 0.47
SHROOM3-202ENST00000466541 IQGAP3Q86VI3 1631 aa18.01■□□□□ 0.47
SHROOM3-202ENST00000466541 SPATA31D1Q6ZQQ2 1576 aa18■□□□□ 0.47
SHROOM3-202ENST00000466541 ARHGAP31Q2M1Z3 1444 aa18■□□□□ 0.47
SHROOM3-202ENST00000466541 A2ML1A8K2U0 1454 aa17.99■□□□□ 0.47
SHROOM3-202ENST00000466541 ZNF142P52746 1687 aaPredicted RBP17.99■□□□□ 0.47
SHROOM3-202ENST00000466541 E9PCH4 1651 aa17.98■□□□□ 0.47
SHROOM3-202ENST00000466541 STAG3Q9UJ98 1225 aa17.97■□□□□ 0.47
SHROOM3-202ENST00000466541 SETD5Q9C0A6 1442 aa17.96■□□□□ 0.47
SHROOM3-202ENST00000466541 NCKAP5LQ9HCH0 1330 aa17.96■□□□□ 0.46
SHROOM3-202ENST00000466541 NLRP1Q9C000 1473 aa17.95■□□□□ 0.46
SHROOM3-202ENST00000466541 STRCQ7RTU9 1775 aa17.95■□□□□ 0.46
SHROOM3-202ENST00000466541 UGGT1Q9NYU2 1555 aa17.95■□□□□ 0.46
SHROOM3-202ENST00000466541 SYNMO15061 1565 aa17.93■□□□□ 0.46
SHROOM3-202ENST00000466541 IDI1Q13907 227 aa17.93■□□□□ 0.46
SHROOM3-202ENST00000466541 THEMISQ8N1K5 641 aaPredicted RBP17.93■□□□□ 0.46
SHROOM3-202ENST00000466541 SLC4A1APQ9BWU0 796 aaKnown RBP17.93■□□□□ 0.46
SHROOM3-202ENST00000466541 PIK3C2BO00750 1634 aa17.92■□□□□ 0.46
SHROOM3-202ENST00000466541 CHGAP10645 457 aaKnown RBP17.92■□□□□ 0.46
SHROOM3-202ENST00000466541 RPRD2Q5VT52 1461 aaKnown RBP17.92■□□□□ 0.46
SHROOM3-202ENST00000466541 PKD2Q13563 968 aa17.91■□□□□ 0.46
SHROOM3-202ENST00000466541 RAB3GAP2Q9H2M9 1393 aa17.91■□□□□ 0.46
SHROOM3-202ENST00000466541 NOS1P29475 1434 aa17.9■□□□□ 0.46
SHROOM3-202ENST00000466541 UBR1Q8IWV7 1749 aa17.89■□□□□ 0.46
SHROOM3-202ENST00000466541 FOXD1Q16676 465 aa17.89■□□□□ 0.45
SHROOM3-202ENST00000466541 DMRT2Q9Y5R5 561 aa17.88■□□□□ 0.45
SHROOM3-202ENST00000466541 ANKLE2Q86XL3 938 aa17.87■□□□□ 0.45
SHROOM3-202ENST00000466541 SLC52A1Q9NWF4 448 aa17.87■□□□□ 0.45
SHROOM3-202ENST00000466541 SPHKAPQ2M3C7 1700 aa17.86■□□□□ 0.45
SHROOM3-202ENST00000466541 MYO5BQ9ULV0 1848 aa17.86■□□□□ 0.45
SHROOM3-202ENST00000466541 MPHOSPH9Q99550 1183 aa17.86■□□□□ 0.45
SHROOM3-202ENST00000466541 SENP3Q9H4L4 574 aaPredicted RBP17.86■□□□□ 0.45
SHROOM3-202ENST00000466541 POLR1AO95602 1720 aaPredicted RBP17.85■□□□□ 0.45
SHROOM3-202ENST00000466541 PLA2R1Q13018 1463 aa17.85■□□□□ 0.45
SHROOM3-202ENST00000466541 TXNDC2Q86VQ3 553 aa17.83■□□□□ 0.44
SHROOM3-202ENST00000466541 ADGRB3O60242 1522 aa17.82■□□□□ 0.44
SHROOM3-202ENST00000466541 EID1Q9Y6B2 187 aa17.82■□□□□ 0.44
SHROOM3-202ENST00000466541 LTKP29376 864 aa17.8■□□□□ 0.44
SHROOM3-202ENST00000466541 TRIM26Q12899 539 aaPredicted RBP17.8■□□□□ 0.44
SHROOM3-202ENST00000466541 NUTM2DQ5VT03 806 aaPredicted RBP17.8■□□□□ 0.44
SHROOM3-202ENST00000466541 PTPRTO14522 1441 aa17.8■□□□□ 0.44
SHROOM3-202ENST00000466541 TMEM2Q9UHN6 1383 aa17.79■□□□□ 0.44
SHROOM3-202ENST00000466541 ZNF326Q5BKZ1 582 aaKnown RBP17.79■□□□□ 0.44
SHROOM3-202ENST00000466541 BCANQ96GW7 911 aa17.79■□□□□ 0.44
SHROOM3-202ENST00000466541 TMEM131LA2VDJ0 1609 aa17.79■□□□□ 0.44
SHROOM3-202ENST00000466541 KDM5AP29375 1690 aaKnown RBP17.78■□□□□ 0.44
SHROOM3-202ENST00000466541 CLTCL1P53675 1640 aa17.78■□□□□ 0.44
SHROOM3-202ENST00000466541 NEURL4Q96JN8 1562 aa17.78■□□□□ 0.44
SHROOM3-202ENST00000466541 ACIN1Q9UKV3 1341 aaKnown RBP17.77■□□□□ 0.44
SHROOM3-202ENST00000466541 SCAF11Q99590 1463 aaKnown RBP17.77■□□□□ 0.44
SHROOM3-202ENST00000466541 PPP1R15AO75807 674 aaPredicted RBP17.77■□□□□ 0.44
SHROOM3-202ENST00000466541 NPHP4O75161 1426 aaPredicted RBP17.77■□□□□ 0.44
SHROOM3-202ENST00000466541 TRPM2O94759 1503 aa17.77■□□□□ 0.43
SHROOM3-202ENST00000466541 KIF1BO60333 1816 aa17.76■□□□□ 0.43
SHROOM3-202ENST00000466541 SLIT1O75093 1534 aa17.76■□□□□ 0.43
SHROOM3-202ENST00000466541 IQGAP1P46940 1657 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms