RNA–Protein interactions for RNA: ENST00000466453.1

APP-214, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 374 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-214ENST00000466453 PHLPP1O60346 1717 aa13.64□□□□□ -0.23
APP-214ENST00000466453 LRP5O75197 1615 aa13.64□□□□□ -0.23
APP-214ENST00000466453 KIF14Q15058 1648 aa13.64□□□□□ -0.23
APP-214ENST00000466453 TNRQ92752 1358 aa13.63□□□□□ -0.23
APP-214ENST00000466453 KDM5DQ9BY66 1539 aa13.62□□□□□ -0.23
APP-214ENST00000466453 RGS12O14924 1447 aa13.62□□□□□ -0.23
APP-214ENST00000466453 CDC42BPBQ9Y5S2 1711 aa13.61□□□□□ -0.23
APP-214ENST00000466453 LRRC9Q6ZRR7 1453 aa13.61□□□□□ -0.23
APP-214ENST00000466453 THEMISQ8N1K5 641 aaPredicted RBP13.61□□□□□ -0.23
APP-214ENST00000466453 FAM135AQ9P2D6 1515 aa13.6□□□□□ -0.23
APP-214ENST00000466453 UGGT1Q9NYU2 1555 aa13.6□□□□□ -0.23
APP-214ENST00000466453 SPATA31A6Q5VVP1 1343 aa13.6□□□□□ -0.23
APP-214ENST00000466453 MEX3CQ5U5Q3 659 aaKnown RBP13.59□□□□□ -0.23
APP-214ENST00000466453 COL16A1Q07092 1604 aaPredicted RBP13.59□□□□□ -0.23
APP-214ENST00000466453 SAMD9LQ8IVG5 1584 aa13.58□□□□□ -0.23
APP-214ENST00000466453 ATP7AQ04656 1500 aa13.58□□□□□ -0.24
APP-214ENST00000466453 NLRP1Q9C000 1473 aa13.57□□□□□ -0.24
APP-214ENST00000466453 FGD6Q6ZV73 1430 aa13.56□□□□□ -0.24
APP-214ENST00000466453 PREX2Q70Z35 1606 aa13.55□□□□□ -0.24
APP-214ENST00000466453 GGT6Q6P531 493 aa13.55□□□□□ -0.24
APP-214ENST00000466453 ATAD2Q6PL18 1390 aa13.55□□□□□ -0.24
APP-214ENST00000466453 PZPP20742 1482 aa13.55□□□□□ -0.24
APP-214ENST00000466453 A2MP01023 1474 aa13.54□□□□□ -0.24
APP-214ENST00000466453 MAP3K1Q13233 1512 aa13.54□□□□□ -0.24
APP-214ENST00000466453 SHPRHQ149N8 1683 aa13.53□□□□□ -0.24
APP-214ENST00000466453 FBXO31Q5XUX0 539 aaPredicted RBP13.53□□□□□ -0.24
APP-214ENST00000466453 NUTM2BA6NNL0 878 aaPredicted RBP13.52□□□□□ -0.25
APP-214ENST00000466453 NUTM2EB1AL46 878 aaPredicted RBP13.52□□□□□ -0.25
APP-214ENST00000466453 NUTM2DQ5VT03 806 aaPredicted RBP13.52□□□□□ -0.25
APP-214ENST00000466453 NUTM2AQ8IVF1 878 aaPredicted RBP13.52□□□□□ -0.25
APP-214ENST00000466453 TMEM94Q12767 1356 aa13.51□□□□□ -0.25
APP-214ENST00000466453 TROQ12816 1431 aaPredicted RBP13.5□□□□□ -0.25
APP-214ENST00000466453 MIA2Q96PC5 1412 aa13.5□□□□□ -0.25
APP-214ENST00000466453 INO80Q9ULG1 1556 aaPredicted RBP13.49□□□□□ -0.25
APP-214ENST00000466453 SPAG9O60271 1321 aaKnown RBP13.49□□□□□ -0.25
APP-214ENST00000466453 CEP350Q5VT06 3117 aa13.48□□□□□ -0.25
APP-214ENST00000466453 RBM6P78332 1123 aaKnown RBP13.48□□□□□ -0.25
APP-214ENST00000466453 AFF2P51816 1311 aa13.47□□□□□ -0.25
APP-214ENST00000466453 CDK11AQ9UQ88 783 aaPredicted RBP13.47□□□□□ -0.25
APP-214ENST00000466453 SCAF11Q99590 1463 aaKnown RBP13.47□□□□□ -0.25
APP-214ENST00000466453 NHSL1Q5SYE7 1610 aa13.46□□□□□ -0.25
APP-214ENST00000466453 TIAM1Q13009 1591 aa13.46□□□□□ -0.25
APP-214ENST00000466453 CLIP1P30622 1438 aa13.46□□□□□ -0.26
APP-214ENST00000466453 ADGBQ8N7X0 1667 aa13.45□□□□□ -0.26
APP-214ENST00000466453 YY1P25490 414 aa13.45□□□□□ -0.26
APP-214ENST00000466453 NWD1Q149M9 1564 aa13.44□□□□□ -0.26
APP-214ENST00000466453 SYCP2Q9BX26 1530 aa13.44□□□□□ -0.26
APP-214ENST00000466453 CCDC125Q86Z20 511 aa13.43□□□□□ -0.26
APP-214ENST00000466453 SLAIN2Q9P270 581 aa13.43□□□□□ -0.26
APP-214ENST00000466453 AHDC1Q5TGY3 1603 aaPredicted RBP13.42□□□□□ -0.26
APP-214ENST00000466453 CDC42BPAQ5VT25 1732 aa13.42□□□□□ -0.26
APP-214ENST00000466453 ABCC3O15438 1527 aa13.41□□□□□ -0.26
APP-214ENST00000466453 PRDM15P57071 1507 aaPredicted RBP13.41□□□□□ -0.26
APP-214ENST00000466453 QTRT2Q9H974 415 aaKnown RBP13.41□□□□□ -0.26
APP-214ENST00000466453 UBR1Q8IWV7 1749 aa13.4□□□□□ -0.26
APP-214ENST00000466453 DIP2AQ14689 1571 aa13.4□□□□□ -0.26
APP-214ENST00000466453 RANGAP1P46060 587 aaPredicted RBP13.39□□□□□ -0.27
APP-214ENST00000466453 MSH6P52701 1360 aa13.39□□□□□ -0.27
APP-214ENST00000466453 ARHGAP23Q9P227 1491 aa13.39□□□□□ -0.27
APP-214ENST00000466453 NGLY1Q96IV0 654 aa13.38□□□□□ -0.27
APP-214ENST00000466453 SLIT1O75093 1534 aa13.38□□□□□ -0.27
APP-214ENST00000466453 NKTRP30414 1462 aaKnown RBP13.37□□□□□ -0.27
APP-214ENST00000466453 KDM5AP29375 1690 aaKnown RBP13.37□□□□□ -0.27
APP-214ENST00000466453 KCNA6P17658 529 aa13.36□□□□□ -0.27
APP-214ENST00000466453 LTKP29376 864 aa13.36□□□□□ -0.27
APP-214ENST00000466453 NCOA2Q15596 1464 aa13.36□□□□□ -0.27
APP-214ENST00000466453 PROSER2Q86WR7 435 aaPredicted RBP13.35□□□□□ -0.27
APP-214ENST00000466453 KIAA1107Q9UPP5 1409 aa13.33□□□□□ -0.28
APP-214ENST00000466453 UTRNP46939 3433 aa13.33□□□□□ -0.28
APP-214ENST00000466453 SENP3-EIF4A1A0A087X0R7 540 aa13.33□□□□□ -0.28
APP-214ENST00000466453 BCL9LQ86UU0 1499 aa13.33□□□□□ -0.28
APP-214ENST00000466453 HNRNPMP52272 730 aaKnown RBP eCLIP13.32□□□□□ -0.281e-6■□□□□ 11.1
APP-214ENST00000466453 TXNDC2Q86VQ3 553 aa13.32□□□□□ -0.28
APP-214ENST00000466453 C8orf37Q96NL8 207 aa13.32□□□□□ -0.28
APP-214ENST00000466453 LRRIQ1Q96JM4 1722 aa13.32□□□□□ -0.28
APP-214ENST00000466453 WASHC2CQ9Y4E1 1318 aa13.32□□□□□ -0.28
APP-214ENST00000466453 DHX29Q7Z478 1369 aaKnown RBP13.31□□□□□ -0.28
APP-214ENST00000466453 FMN1Q68DA7 1419 aa13.3□□□□□ -0.28
APP-214ENST00000466453 PLEKHH2Q8IVE3 1493 aa13.3□□□□□ -0.28
APP-214ENST00000466453 HRCP23327 699 aa13.3□□□□□ -0.28
APP-214ENST00000466453 ATP1B4Q9UN42 357 aaPredicted RBP13.3□□□□□ -0.28
APP-214ENST00000466453 BLMP54132 1417 aaPredicted RBP13.3□□□□□ -0.28
APP-214ENST00000466453 ERVK-7P63135 1459 aa13.29□□□□□ -0.28
APP-214ENST00000466453 ZNF777Q9ULD5 760 aaPredicted RBP13.29□□□□□ -0.28
APP-214ENST00000466453 EID1Q9Y6B2 187 aa13.27□□□□□ -0.29
APP-214ENST00000466453 RTEL1-TNFRSF6BF6WH68 1400 aa13.26□□□□□ -0.29
APP-214ENST00000466453 KIF3BO15066 747 aa13.26□□□□□ -0.29
APP-214ENST00000466453 TET3O43151 1660 aa13.26□□□□□ -0.29
APP-214ENST00000466453 SETD5Q9C0A6 1442 aa13.26□□□□□ -0.29
APP-214ENST00000466453 MAST1Q9Y2H9 1570 aa13.25□□□□□ -0.29
APP-214ENST00000466453 CAMSAP2Q08AD1 1489 aa13.25□□□□□ -0.29
APP-214ENST00000466453 DEFB132Q7Z7B7 95 aa13.25□□□□□ -0.29
APP-214ENST00000466453 GPATCH8Q9UKJ3 1502 aaKnown RBP13.24□□□□□ -0.29
APP-214ENST00000466453 PSDA5PKW4 1024 aaPredicted RBP13.24□□□□□ -0.29
APP-214ENST00000466453 TRPC5Q9UL62 973 aaPredicted RBP13.24□□□□□ -0.29
APP-214ENST00000466453 ATRNO75882 1429 aa13.22□□□□□ -0.29
APP-214ENST00000466453 CFAP65Q6ZU64 1925 aaKnown RBP13.22□□□□□ -0.29
APP-214ENST00000466453 NCOA3Q9Y6Q9 1424 aa13.22□□□□□ -0.29
APP-214ENST00000466453 TMEM2Q9UHN6 1383 aa13.21□□□□□ -0.29
APP-214ENST00000466453 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms