RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 RNF17Q9BXT8 1623 aaKnown RBP24.43■■□□□ 1.5
HMGXB4-206ENST00000466438 GPATCH8Q9UKJ3 1502 aaKnown RBP24.42■■□□□ 1.5
HMGXB4-206ENST00000466438 PLEKHH2Q8IVE3 1493 aa24.42■■□□□ 1.5
HMGXB4-206ENST00000466438 ADGBQ8N7X0 1667 aa24.42■■□□□ 1.5
HMGXB4-206ENST00000466438 DEPDC5O75140 1603 aa24.41■■□□□ 1.5
HMGXB4-206ENST00000466438 NPHP4O75161 1426 aaPredicted RBP24.41■■□□□ 1.5
HMGXB4-206ENST00000466438 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.41■■□□□ 1.5
HMGXB4-206ENST00000466438 CASKIN1Q8WXD9 1431 aa24.4■■□□□ 1.5
HMGXB4-206ENST00000466438 LRRC7Q96NW7 1537 aa24.39■■□□□ 1.49
HMGXB4-206ENST00000466438 SYNMO15061 1565 aa24.38■■□□□ 1.49
HMGXB4-206ENST00000466438 PZPP20742 1482 aa24.38■■□□□ 1.49
HMGXB4-206ENST00000466438 FBXO31Q5XUX0 539 aaPredicted RBP24.37■■□□□ 1.49
HMGXB4-206ENST00000466438 THEMISQ8N1K5 641 aaPredicted RBP24.37■■□□□ 1.49
HMGXB4-206ENST00000466438 IQGAP1P46940 1657 aa24.36■■□□□ 1.49
HMGXB4-206ENST00000466438 EHMT2Q96KQ7 1210 aa24.35■■□□□ 1.49
HMGXB4-206ENST00000466438 STRCP1A6NGW2 1772 aa24.34■■□□□ 1.49
HMGXB4-206ENST00000466438 UGGT1Q9NYU2 1555 aa24.33■■□□□ 1.49
HMGXB4-206ENST00000466438 NLRP1Q9C000 1473 aa24.33■■□□□ 1.49
HMGXB4-206ENST00000466438 FAM135AQ9P2D6 1515 aa24.33■■□□□ 1.49
HMGXB4-206ENST00000466438 KDM5DQ9BY66 1539 aa24.31■■□□□ 1.48
HMGXB4-206ENST00000466438 CFDP1Q9UEE9 299 aaPredicted RBP24.31■■□□□ 1.48
HMGXB4-206ENST00000466438 MIA2Q96PC5 1412 aa24.29■■□□□ 1.48
HMGXB4-206ENST00000466438 POTEAQ6S8J7 498 aa24.29■■□□□ 1.48
HMGXB4-206ENST00000466438 DHX29Q7Z478 1369 aaKnown RBP24.28■■□□□ 1.48
HMGXB4-206ENST00000466438 FYCO1Q9BQS8 1478 aa24.26■■□□□ 1.47
HMGXB4-206ENST00000466438 CCNB3Q8WWL7 1395 aa24.25■■□□□ 1.47
HMGXB4-206ENST00000466438 RTEL1-TNFRSF6BF6WH68 1400 aa24.25■■□□□ 1.47
HMGXB4-206ENST00000466438 KIF3BO15066 747 aa24.22■■□□□ 1.47
HMGXB4-206ENST00000466438 WASHC2CQ9Y4E1 1318 aa24.21■■□□□ 1.47
HMGXB4-206ENST00000466438 MBD5Q9P267 1494 aa24.2■■□□□ 1.47
HMGXB4-206ENST00000466438 ZC3H13Q5T200 1668 aaKnown RBP24.19■■□□□ 1.46
HMGXB4-206ENST00000466438 SETD1AO15047 1707 aaKnown RBP24.18■■□□□ 1.46
HMGXB4-206ENST00000466438 FAM135BQ49AJ0 1406 aa24.18■■□□□ 1.46
HMGXB4-206ENST00000466438 ZNF644Q9H582 1327 aaPredicted RBP24.15■■□□□ 1.46
HMGXB4-206ENST00000466438 XIRP1Q702N8 1843 aaKnown RBP24.14■■□□□ 1.45
HMGXB4-206ENST00000466438 SCAF11Q99590 1463 aaKnown RBP24.1■■□□□ 1.45
HMGXB4-206ENST00000466438 TIAM1Q13009 1591 aa24.1■■□□□ 1.45
HMGXB4-206ENST00000466438 MTUS2Q5JR59 1369 aa24.07■■□□□ 1.44
HMGXB4-206ENST00000466438 CCDC141Q6ZP82 1450 aa24.06■■□□□ 1.44
HMGXB4-206ENST00000466438 ERVK-7P63135 1459 aa24.05■■□□□ 1.44
HMGXB4-206ENST00000466438 ROBO1Q9Y6N7 1651 aa24.05■■□□□ 1.44
HMGXB4-206ENST00000466438 UBR1Q8IWV7 1749 aa24.04■■□□□ 1.44
HMGXB4-206ENST00000466438 ABCC3O15438 1527 aa24.02■■□□□ 1.44
HMGXB4-206ENST00000466438 ARHGAP23Q9P227 1491 aa24.01■■□□□ 1.43
HMGXB4-206ENST00000466438 SLIT1O75093 1534 aa24.01■■□□□ 1.43
HMGXB4-206ENST00000466438 UPF1Q92900 1129 aaKnown RBP eCLIP24.01■■□□□ 1.43
HMGXB4-206ENST00000466438 NCOA2Q15596 1464 aa24■■□□□ 1.43
HMGXB4-206ENST00000466438 LTKP29376 864 aa23.99■■□□□ 1.43
HMGXB4-206ENST00000466438 LRRC9Q6ZRR7 1453 aa23.99■■□□□ 1.43
HMGXB4-206ENST00000466438 RSPH4AQ5TD94 716 aa23.98■■□□□ 1.43
HMGXB4-206ENST00000466438 TXNDC2Q86VQ3 553 aa23.98■■□□□ 1.43
HMGXB4-206ENST00000466438 TMEM94Q12767 1356 aa23.98■■□□□ 1.43
HMGXB4-206ENST00000466438 EHBP1L1Q8N3D4 1523 aa23.96■■□□□ 1.43
HMGXB4-206ENST00000466438 MAP3K1Q13233 1512 aa23.94■■□□□ 1.42
HMGXB4-206ENST00000466438 CAMSAP2Q08AD1 1489 aa23.94■■□□□ 1.42
HMGXB4-206ENST00000466438 JCADQ9P266 1359 aa23.94■■□□□ 1.42
HMGXB4-206ENST00000466438 CEP162Q5TB80 1403 aa23.93■■□□□ 1.42
HMGXB4-206ENST00000466438 EID1Q9Y6B2 187 aa23.92■■□□□ 1.42
HMGXB4-206ENST00000466438 PHLPP1O60346 1717 aa23.9■■□□□ 1.42
HMGXB4-206ENST00000466438 ARHGEF5Q12774 1597 aa23.89■■□□□ 1.41
HMGXB4-206ENST00000466438 KCNA6P17658 529 aa23.88■■□□□ 1.41
HMGXB4-206ENST00000466438 MROH1Q8NDA8 1641 aa23.88■■□□□ 1.41
HMGXB4-206ENST00000466438 EIF2AK4Q9P2K8 1649 aaKnown RBP23.88■■□□□ 1.41
HMGXB4-206ENST00000466438 TSPY4P0CV99 314 aa23.86■■□□□ 1.41
HMGXB4-206ENST00000466438 TSPY10P0CW01 314 aa23.86■■□□□ 1.41
HMGXB4-206ENST00000466438 ZNF772Q68DY9 489 aaPredicted RBP23.86■■□□□ 1.41
HMGXB4-206ENST00000466438 CEP152O94986 1710 aa23.86■■□□□ 1.41
HMGXB4-206ENST00000466438 PRDM15P57071 1507 aaPredicted RBP23.85■■□□□ 1.41
HMGXB4-206ENST00000466438 PROSER2Q86WR7 435 aaPredicted RBP23.85■■□□□ 1.41
HMGXB4-206ENST00000466438 TRIM52Q96A61 297 aa23.85■■□□□ 1.41
HMGXB4-206ENST00000466438 TMEM2Q9UHN6 1383 aa23.85■■□□□ 1.41
HMGXB4-206ENST00000466438 CFAP65Q6ZU64 1925 aaKnown RBP23.84■■□□□ 1.41
HMGXB4-206ENST00000466438 LRP6O75581 1613 aa23.84■■□□□ 1.41
HMGXB4-206ENST00000466438 NKTRP30414 1462 aaKnown RBP23.83■■□□□ 1.41
HMGXB4-206ENST00000466438 MSH6P52701 1360 aa23.82■■□□□ 1.4
HMGXB4-206ENST00000466438 COL16A1Q07092 1604 aaPredicted RBP23.82■■□□□ 1.4
HMGXB4-206ENST00000466438 RBM33Q96EV2 1170 aaKnown RBP23.82■■□□□ 1.4
HMGXB4-206ENST00000466438 SPATA31A6Q5VVP1 1343 aa23.82■■□□□ 1.4
HMGXB4-206ENST00000466438 SRCAPQ6ZRS2 3230 aa23.82■■□□□ 1.4
HMGXB4-206ENST00000466438 SLAIN2Q9P270 581 aa23.81■■□□□ 1.4
HMGXB4-206ENST00000466438 NWD1Q149M9 1564 aa23.81■■□□□ 1.4
HMGXB4-206ENST00000466438 ARHGAP31Q2M1Z3 1444 aa23.8■■□□□ 1.4
HMGXB4-206ENST00000466438 PIK3C2BO00750 1634 aa23.8■■□□□ 1.4
HMGXB4-206ENST00000466438 MAST1Q9Y2H9 1570 aa23.79■■□□□ 1.4
HMGXB4-206ENST00000466438 FGD6Q6ZV73 1430 aa23.79■■□□□ 1.4
HMGXB4-206ENST00000466438 MEX3CQ5U5Q3 659 aaKnown RBP23.79■■□□□ 1.4
HMGXB4-206ENST00000466438 TET3O43151 1660 aa23.79■■□□□ 1.4
HMGXB4-206ENST00000466438 CDK12Q9NYV4 1490 aaPredicted RBP23.78■■□□□ 1.4
HMGXB4-206ENST00000466438 KDM5AP29375 1690 aaKnown RBP23.76■■□□□ 1.39
HMGXB4-206ENST00000466438 SLC26A8Q96RN1 970 aa23.76■■□□□ 1.39
HMGXB4-206ENST00000466438 EFCAB6Q5THR3 1501 aa23.75■■□□□ 1.39
HMGXB4-206ENST00000466438 RXRBP28702 533 aa23.75■■□□□ 1.39
HMGXB4-206ENST00000466438 STAG3Q9UJ98 1225 aa23.74■■□□□ 1.39
HMGXB4-206ENST00000466438 SHPRHQ149N8 1683 aa23.71■■□□□ 1.39
HMGXB4-206ENST00000466438 DUOX2Q9NRD8 1548 aa23.69■■□□□ 1.38
HMGXB4-206ENST00000466438 AHDC1Q5TGY3 1603 aaPredicted RBP23.67■■□□□ 1.38
HMGXB4-206ENST00000466438 IDI1Q13907 227 aa23.64■■□□□ 1.37
HMGXB4-206ENST00000466438 NCOA3Q9Y6Q9 1424 aa23.62■■□□□ 1.37
HMGXB4-206ENST00000466438 ADGRB3O60242 1522 aa23.6■■□□□ 1.37
HMGXB4-206ENST00000466438 CHD2O14647 1828 aaKnown RBP23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms