RNA–Protein interactions for RNA: ENST00000466252.5

SNX21-208, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-208ENST00000466252 EIF2AK4Q9P2K8 1649 aaKnown RBP35.06■■■■□ 3.2
SNX21-208ENST00000466252 ERBINQ96RT1 1412 aa35.06■■■■□ 3.2
SNX21-208ENST00000466252 CNTLNQ9NXG0 1405 aa35.06■■■■□ 3.2
SNX21-208ENST00000466252 ZMYM3Q14202 1370 aa35.02■■■■□ 3.2
SNX21-208ENST00000466252 RNF17Q9BXT8 1623 aaKnown RBP35■■■■□ 3.19
SNX21-208ENST00000466252 PLPPR3Q6T4P5 718 aa35■■■■□ 3.19
SNX21-208ENST00000466252 CLTCQ00610 1675 aaKnown RBP34.98■■■■□ 3.19
SNX21-208ENST00000466252 WASHC2CQ9Y4E1 1318 aa34.97■■■■□ 3.19
SNX21-208ENST00000466252 ANKRD50Q9ULJ7 1429 aa34.97■■■■□ 3.19
SNX21-208ENST00000466252 C3P01024 1663 aa34.96■■■■□ 3.19
SNX21-208ENST00000466252 MROH1Q8NDA8 1641 aa34.95■■■■□ 3.19
SNX21-208ENST00000466252 MROH2AA6NES4 1674 aa34.95■■■■□ 3.19
SNX21-208ENST00000466252 SETD1BQ9UPS6 1966 aaKnown RBP34.93■■■■□ 3.18
SNX21-208ENST00000466252 FAM135AQ9P2D6 1515 aa34.91■■■■□ 3.18
SNX21-208ENST00000466252 DEPDC5O75140 1603 aa34.88■■■■□ 3.17
SNX21-208ENST00000466252 KDM5DQ9BY66 1539 aa34.88■■■■□ 3.17
SNX21-208ENST00000466252 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.88■■■■□ 3.173e-6■■□□□ 11.7
SNX21-208ENST00000466252 ABCC3O15438 1527 aa34.84■■■■□ 3.17
SNX21-208ENST00000466252 PRDM15P57071 1507 aaPredicted RBP34.84■■■■□ 3.17
SNX21-208ENST00000466252 NAIPQ13075 1403 aa34.81■■■■□ 3.16
SNX21-208ENST00000466252 VWDEQ8N2E2 1590 aa34.8■■■■□ 3.16
SNX21-208ENST00000466252 FBXO31Q5XUX0 539 aaPredicted RBP34.8■■■■□ 3.16
SNX21-208ENST00000466252 NPATQ14207 1427 aa34.8■■■■□ 3.16
SNX21-208ENST00000466252 ZC3H13Q5T200 1668 aaKnown RBP34.78■■■■□ 3.16
SNX21-208ENST00000466252 KANK1Q14678 1352 aa34.77■■■■□ 3.16
SNX21-208ENST00000466252 CEP152O94986 1710 aa34.77■■■■□ 3.16
SNX21-208ENST00000466252 PZPP20742 1482 aa34.75■■■■□ 3.15
SNX21-208ENST00000466252 HFM1A2PYH4 1435 aa34.74■■■■□ 3.15
SNX21-208ENST00000466252 LMTK3Q96Q04 1460 aa34.73■■■■□ 3.15
SNX21-208ENST00000466252 LMTK2Q8IWU2 1503 aa34.72■■■■□ 3.15
SNX21-208ENST00000466252 ARHGAP31Q2M1Z3 1444 aa34.71■■■■□ 3.15
SNX21-208ENST00000466252 UNC13BO14795 1591 aa34.7■■■■□ 3.14
SNX21-208ENST00000466252 CFAP65Q6ZU64 1925 aaKnown RBP34.69■■■■□ 3.14
SNX21-208ENST00000466252 CAMSAP1Q5T5Y3 1602 aa34.69■■■■□ 3.14
SNX21-208ENST00000466252 PREX1Q8TCU6 1659 aa34.68■■■■□ 3.14
SNX21-208ENST00000466252 GCC2Q8IWJ2 1684 aa34.67■■■■□ 3.14
SNX21-208ENST00000466252 UHRF1BP1Q6BDS2 1440 aa34.64■■■■□ 3.14
SNX21-208ENST00000466252 NUP155O75694 1391 aa34.63■■■■□ 3.13
SNX21-208ENST00000466252 HSPA2P54652 639 aa34.62■■■■□ 3.13
SNX21-208ENST00000466252 TNRQ92752 1358 aa34.62■■■■□ 3.13
SNX21-208ENST00000466252 SPATA31D1Q6ZQQ2 1576 aa34.58■■■■□ 3.13
SNX21-208ENST00000466252 ERVK-7P63135 1459 aa34.58■■■■□ 3.13
SNX21-208ENST00000466252 IQGAP3Q86VI3 1631 aa34.57■■■■□ 3.12
SNX21-208ENST00000466252 EFCAB6Q5THR3 1501 aa34.55■■■■□ 3.12
SNX21-208ENST00000466252 TET3O43151 1660 aa34.54■■■■□ 3.12
SNX21-208ENST00000466252 SETD5Q9C0A6 1442 aa34.51■■■■□ 3.12
SNX21-208ENST00000466252 MYO3AQ8NEV4 1616 aa34.51■■■■□ 3.11
SNX21-208ENST00000466252 NOS1P29475 1434 aa34.49■■■■□ 3.11
SNX21-208ENST00000466252 RPRD2Q5VT52 1461 aaKnown RBP34.49■■■■□ 3.11
SNX21-208ENST00000466252 A2ML1A8K2U0 1454 aa34.48■■■■□ 3.11
SNX21-208ENST00000466252 TRIM52Q96A61 297 aa34.48■■■■□ 3.11
SNX21-208ENST00000466252 NLRP1Q9C000 1473 aa34.47■■■■□ 3.11
SNX21-208ENST00000466252 CEP170BQ9Y4F5 1589 aaPredicted RBP34.46■■■■□ 3.11
SNX21-208ENST00000466252 ZNF142P52746 1687 aaPredicted RBP34.46■■■■□ 3.11
SNX21-208ENST00000466252 E9PCH4 1651 aa34.45■■■■□ 3.11
SNX21-208ENST00000466252 IDI1Q13907 227 aa34.42■■■■□ 3.1
SNX21-208ENST00000466252 ACIN1Q9UKV3 1341 aaKnown RBP34.39■■■■□ 3.1
SNX21-208ENST00000466252 SYNMO15061 1565 aa34.39■■■■□ 3.1
SNX21-208ENST00000466252 RAB3GAP2Q9H2M9 1393 aa34.38■■■■□ 3.09
SNX21-208ENST00000466252 HRCP23327 699 aa34.38■■■■□ 3.09
SNX21-208ENST00000466252 THEMISQ8N1K5 641 aaPredicted RBP34.38■■■■□ 3.09
SNX21-208ENST00000466252 SLC52A1Q9NWF4 448 aa34.38■■■■□ 3.09
SNX21-208ENST00000466252 STRCQ7RTU9 1775 aa34.37■■■■□ 3.09
SNX21-208ENST00000466252 SLC4A1APQ9BWU0 796 aaKnown RBP34.35■■■■□ 3.09
SNX21-208ENST00000466252 UGGT1Q9NYU2 1555 aa34.33■■■■□ 3.09
SNX21-208ENST00000466252 PKD2Q13563 968 aa34.33■■■■□ 3.09
SNX21-208ENST00000466252 MPHOSPH9Q99550 1183 aa34.32■■■■□ 3.08
SNX21-208ENST00000466252 PTPRTO14522 1441 aa34.3■■■■□ 3.08
SNX21-208ENST00000466252 PLA2R1Q13018 1463 aa34.3■■■■□ 3.08
SNX21-208ENST00000466252 NCKAP5LQ9HCH0 1330 aa34.28■■■■□ 3.08
SNX21-208ENST00000466252 UBR1Q8IWV7 1749 aa34.27■■■■□ 3.08
SNX21-208ENST00000466252 PIK3C2BO00750 1634 aa34.27■■■■□ 3.08
SNX21-208ENST00000466252 TRIM26Q12899 539 aaPredicted RBP34.26■■■■□ 3.08
SNX21-208ENST00000466252 DMRT2Q9Y5R5 561 aa34.24■■■■□ 3.07
SNX21-208ENST00000466252 ANKLE2Q86XL3 938 aa34.21■■■■□ 3.07
SNX21-208ENST00000466252 KDM5AP29375 1690 aaKnown RBP34.21■■■■□ 3.07
SNX21-208ENST00000466252 FOXD1Q16676 465 aa34.2■■■■□ 3.07
SNX21-208ENST00000466252 STAG3Q9UJ98 1225 aa34.2■■■■□ 3.07
SNX21-208ENST00000466252 SPHKAPQ2M3C7 1700 aa34.2■■■■□ 3.07
SNX21-208ENST00000466252 ARHGAP23Q9P227 1491 aa34.16■■■■□ 3.06
SNX21-208ENST00000466252 LTKP29376 864 aa34.15■■■■□ 3.06
SNX21-208ENST00000466252 SLIT1O75093 1534 aa34.14■■■■□ 3.06
SNX21-208ENST00000466252 TMEM2Q9UHN6 1383 aa34.13■■■■□ 3.05
SNX21-208ENST00000466252 TMEM131LA2VDJ0 1609 aa34.13■■■■□ 3.05
SNX21-208ENST00000466252 ADGRB3O60242 1522 aa34.12■■■■□ 3.05
SNX21-208ENST00000466252 TXNDC2Q86VQ3 553 aa34.11■■■■□ 3.05
SNX21-208ENST00000466252 MYO5BQ9ULV0 1848 aa34.11■■■■□ 3.05
SNX21-208ENST00000466252 TRPM2O94759 1503 aa34.1■■■■□ 3.05
SNX21-208ENST00000466252 MED14O60244 1454 aa34.08■■■■□ 3.05
SNX21-208ENST00000466252 NEURL4Q96JN8 1562 aa34.08■■■■□ 3.05
SNX21-208ENST00000466252 CHGAP10645 457 aaKnown RBP34.08■■■■□ 3.05
SNX21-208ENST00000466252 POLR1AO95602 1720 aaPredicted RBP34.07■■■■□ 3.05
SNX21-208ENST00000466252 CLTCL1P53675 1640 aa34.05■■■■□ 3.04
SNX21-208ENST00000466252 EID1Q9Y6B2 187 aa34.05■■■■□ 3.04
SNX21-208ENST00000466252 SCAF11Q99590 1463 aaKnown RBP34.01■■■■□ 3.04
SNX21-208ENST00000466252 NPHP4O75161 1426 aaPredicted RBP34■■■■□ 3.03
SNX21-208ENST00000466252 ZFYVE9O95405 1425 aa34■■■■□ 3.03
SNX21-208ENST00000466252 HDGFP51858 240 aaKnown RBP33.98■■■■□ 3.03
SNX21-208ENST00000466252 RIMS2Q9UQ26 1411 aa33.97■■■■□ 3.03
SNX21-208ENST00000466252 KIF1BO60333 1816 aa33.96■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms