RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 DENND4BO75064 1496 aaPredicted RBP15.17■□□□□ 0.02
ATG3-203ENST00000465980 POTEFA5A3E0 1075 aa15.17■□□□□ 0.02
ATG3-203ENST00000465980 SCUBE2Q9NQ36 999 aa15.16■□□□□ 0.02
ATG3-203ENST00000465980 IER5LQ5T953 404 aa15.14■□□□□ 0.01
ATG3-203ENST00000465980 HECW2Q9P2P5 1572 aa15.14■□□□□ 0.01
ATG3-203ENST00000465980 BCORL1Q5H9F3 1711 aa15.14■□□□□ 0.01
ATG3-203ENST00000465980 ADAMTSL3P82987 1691 aa15.13■□□□□ 0.01
ATG3-203ENST00000465980 TROQ12816 1431 aaPredicted RBP15.13■□□□□ 0.01
ATG3-203ENST00000465980 IFNL1Q8IU54 200 aa15.13■□□□□ 0.01
ATG3-203ENST00000465980 CDK11AQ9UQ88 783 aaPredicted RBP15.13■□□□□ 0.01
ATG3-203ENST00000465980 ARID4BQ4LE39 1312 aaPredicted RBP15.13■□□□□ 0.01
ATG3-203ENST00000465980 PLCH2O75038 1416 aa15.12■□□□□ 0.01
ATG3-203ENST00000465980 CLIP1P30622 1438 aa15.12■□□□□ 0.01
ATG3-203ENST00000465980 TRIM35Q9UPQ4 493 aa15.12■□□□□ 0.01
ATG3-203ENST00000465980 ZMYM4Q5VZL5 1548 aa15.12■□□□□ 0.01
ATG3-203ENST00000465980 CASKIN1Q8WXD9 1431 aa15.11■□□□□ 0.01
ATG3-203ENST00000465980 MADDQ8WXG6 1647 aa15.11■□□□□ 0.01
ATG3-203ENST00000465980 SIGLEC1Q9BZZ2 1709 aa15.11■□□□□ 0.01
ATG3-203ENST00000465980 CDC42BPBQ9Y5S2 1711 aa15.11■□□□□ 0.01
ATG3-203ENST00000465980 ARHGAP5Q13017 1502 aa15.11■□□□□ 0.01
ATG3-203ENST00000465980 ZFYVE16Q7Z3T8 1539 aa15.11■□□□□ 0.01
ATG3-203ENST00000465980 CCDC18Q5T9S5 1454 aa15.1■□□□□ 0.01
ATG3-203ENST00000465980 RIMS1Q86UR5 1692 aaKnown RBP15.09■□□□□ 0.01
ATG3-203ENST00000465980 SCAPERQ9BY12 1400 aa15.09■□□□□ 0.01
ATG3-203ENST00000465980 FYCO1Q9BQS8 1478 aa15.09■□□□□ 0.01
ATG3-203ENST00000465980 SEC24BO95487 1268 aa15.09■□□□□ 0.01
ATG3-203ENST00000465980 POGZQ7Z3K3 1410 aa15.09■□□□□ 0.01
ATG3-203ENST00000465980 YEATS2Q9ULM3 1422 aa15.09■□□□□ 0.01
ATG3-203ENST00000465980 PREX2Q70Z35 1606 aa15.08■□□□□ 0
ATG3-203ENST00000465980 CDC42BPAQ5VT25 1732 aa15.07■□□□□ 0
ATG3-203ENST00000465980 DCAF8Q5TAQ9 597 aa15.07■□□□□ 0
ATG3-203ENST00000465980 EFCAB2Q5VUJ9 269 aa15.07■□□□□ 0
ATG3-203ENST00000465980 LOC105371045A0A1W2PR82 267 aa15.06■□□□□ 0
ATG3-203ENST00000465980 PTPRMP28827 1452 aa15.06■□□□□ 0
ATG3-203ENST00000465980 COLQQ9Y215 455 aaPredicted RBP15.05■□□□□ -0
ATG3-203ENST00000465980 FER1L4A9Z1Z3 1794 aa15.04■□□□□ -0
ATG3-203ENST00000465980 POTEMA6NI47 508 aa15.04■□□□□ -0
ATG3-203ENST00000465980 VASPP50552 380 aaPredicted RBP15.04■□□□□ -0
ATG3-203ENST00000465980 MAGI2Q86UL8 1455 aa15.03■□□□□ -0
ATG3-203ENST00000465980 TMEM106CQ9BVX2 250 aa15.03■□□□□ -0
ATG3-203ENST00000465980 ITSN2Q9NZM3 1697 aa15.03■□□□□ -0
ATG3-203ENST00000465980 ZNF518AQ6AHZ1 1483 aa15.01□□□□□ -0.01
ATG3-203ENST00000465980 KDM5CP41229 1560 aa15□□□□□ -0.01
ATG3-203ENST00000465980 MLECQ14165 292 aa15□□□□□ -0.01
ATG3-203ENST00000465980 ABCC1P33527 1531 aa15□□□□□ -0.01
ATG3-203ENST00000465980 PYGBP11216 843 aa14.99□□□□□ -0.01
ATG3-203ENST00000465980 POTEGQ6S5H5 508 aa14.99□□□□□ -0.01
ATG3-203ENST00000465980 MYT1LQ9UL68 1186 aa14.99□□□□□ -0.01
ATG3-203ENST00000465980 CEP162Q5TB80 1403 aa14.99□□□□□ -0.01
ATG3-203ENST00000465980 AFAP1Q8N556 730 aa14.98□□□□□ -0.01
ATG3-203ENST00000465980 ABCA6Q8N139 1617 aa14.98□□□□□ -0.01
ATG3-203ENST00000465980 ATP10AO60312 1499 aa14.97□□□□□ -0.01
ATG3-203ENST00000465980 GSE1Q14687 1217 aa14.97□□□□□ -0.01
ATG3-203ENST00000465980 C9orf84Q5VXU9 1444 aa14.97□□□□□ -0.01
ATG3-203ENST00000465980 DIP2CQ9Y2E4 1556 aa14.97□□□□□ -0.01
ATG3-203ENST00000465980 KLHL34Q8N239 644 aa14.96□□□□□ -0.01
ATG3-203ENST00000465980 ARHGEF12Q9NZN5 1544 aa14.96□□□□□ -0.02
ATG3-203ENST00000465980 SAMD9LQ8IVG5 1584 aa14.95□□□□□ -0.02
ATG3-203ENST00000465980 TRAPPC8Q9Y2L5 1435 aa14.95□□□□□ -0.02
ATG3-203ENST00000465980 ZNF777Q9ULD5 760 aaPredicted RBP14.94□□□□□ -0.02
ATG3-203ENST00000465980 MTUS2Q5JR59 1369 aa14.94□□□□□ -0.02
ATG3-203ENST00000465980 KIDINS220Q9ULH0 1771 aa14.93□□□□□ -0.02
ATG3-203ENST00000465980 SYCP2Q9BX26 1530 aa14.93□□□□□ -0.02
ATG3-203ENST00000465980 PCDH10Q9P2E7 1040 aa14.92□□□□□ -0.02
ATG3-203ENST00000465980 GPATCH8Q9UKJ3 1502 aaKnown RBP14.92□□□□□ -0.02
ATG3-203ENST00000465980 LMTK3Q96Q04 1460 aa14.91□□□□□ -0.02
ATG3-203ENST00000465980 PLCG2P16885 1265 aa14.91□□□□□ -0.02
ATG3-203ENST00000465980 PLSCR2Q9NRY7 297 aa14.91□□□□□ -0.02
ATG3-203ENST00000465980 MLH3Q9UHC1 1453 aa14.9□□□□□ -0.02
ATG3-203ENST00000465980 IRX5P78411 483 aaPredicted RBP14.9□□□□□ -0.02
ATG3-203ENST00000465980 EHBP1L1Q8N3D4 1523 aa14.9□□□□□ -0.02
ATG3-203ENST00000465980 TIAM1Q13009 1591 aa14.9□□□□□ -0.02
ATG3-203ENST00000465980 CCNB3Q8WWL7 1395 aa14.89□□□□□ -0.03
ATG3-203ENST00000465980 LCE2DQ5TA82 110 aaPredicted RBP14.89□□□□□ -0.03
ATG3-203ENST00000465980 REREQ9P2R6 1566 aa14.89□□□□□ -0.03
ATG3-203ENST00000465980 PCDHB8Q9UN66 801 aa14.88□□□□□ -0.03
ATG3-203ENST00000465980 SUPT6HQ7KZ85 1726 aaKnown RBP14.87□□□□□ -0.03
ATG3-203ENST00000465980 ZNF467Q7Z7K2 595 aaPredicted RBP14.87□□□□□ -0.03
ATG3-203ENST00000465980 FAM163AQ96GL9 167 aaPredicted RBP14.87□□□□□ -0.03
ATG3-203ENST00000465980 CHRM1P11229 460 aaPredicted RBP14.86□□□□□ -0.03
ATG3-203ENST00000465980 HNRNPMP52272 730 aaKnown RBP eCLIP14.86□□□□□ -0.03
ATG3-203ENST00000465980 CFDP1Q9UEE9 299 aaPredicted RBP14.86□□□□□ -0.03
ATG3-203ENST00000465980 PREX1Q8TCU6 1659 aa14.85□□□□□ -0.03
ATG3-203ENST00000465980 HSPA2P54652 639 aa14.85□□□□□ -0.03
ATG3-203ENST00000465980 C3P01024 1663 aa14.84□□□□□ -0.03
ATG3-203ENST00000465980 ATP7AQ04656 1500 aa14.84□□□□□ -0.03
ATG3-203ENST00000465980 OCEL1Q9H607 264 aa14.84□□□□□ -0.03
ATG3-203ENST00000465980 INO80Q9ULG1 1556 aaPredicted RBP14.84□□□□□ -0.03
ATG3-203ENST00000465980 SETD1BQ9UPS6 1966 aaKnown RBP14.84□□□□□ -0.03
ATG3-203ENST00000465980 PLEKHH2Q8IVE3 1493 aa14.83□□□□□ -0.03
ATG3-203ENST00000465980 CEBPAP49715 358 aaPredicted RBP14.83□□□□□ -0.04
ATG3-203ENST00000465980 ILDR1Q86SU0 546 aaPredicted RBP14.83□□□□□ -0.04
ATG3-203ENST00000465980 SPAG9O60271 1321 aaKnown RBP14.83□□□□□ -0.04
ATG3-203ENST00000465980 AGLP35573 1532 aa14.82□□□□□ -0.04
ATG3-203ENST00000465980 ZNF644Q9H582 1327 aaPredicted RBP14.81□□□□□ -0.04
ATG3-203ENST00000465980 VPS8Q8N3P4 1428 aa14.8□□□□□ -0.04
ATG3-203ENST00000465980 KIAA1107Q9UPP5 1409 aa14.8□□□□□ -0.04
ATG3-203ENST00000465980 NCOA2Q15596 1464 aa14.8□□□□□ -0.04
ATG3-203ENST00000465980 ADGBQ8N7X0 1667 aa14.79□□□□□ -0.04
ATG3-203ENST00000465980 SLAIN1Q8ND83 568 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms