RNA–Protein interactions for RNA: ENST00000465721.1

CNOT4-208, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 4

Gene CNOT4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-208ENST00000465721 CEP162Q5TB80 1403 aa19.15■□□□□ 0.66
CNOT4-208ENST00000465721 KDM5DQ9BY66 1539 aa19.14■□□□□ 0.65
CNOT4-208ENST00000465721 PPP6R1Q9UPN7 881 aa19.13■□□□□ 0.65
CNOT4-208ENST00000465721 PZPP20742 1482 aa19.11■□□□□ 0.65
CNOT4-208ENST00000465721 CAMSAP2Q08AD1 1489 aa19.11■□□□□ 0.65
CNOT4-208ENST00000465721 CCDC141Q6ZP82 1450 aa19.11■□□□□ 0.65
CNOT4-208ENST00000465721 DHX29Q7Z478 1369 aaKnown RBP19.1■□□□□ 0.65
CNOT4-208ENST00000465721 UBAP1LF5GYI3 381 aa19.09■□□□□ 0.65
CNOT4-208ENST00000465721 ARHGEF5Q12774 1597 aa19.08■□□□□ 0.65
CNOT4-208ENST00000465721 TNRQ92752 1358 aa19.07■□□□□ 0.64
CNOT4-208ENST00000465721 CPS1P31327 1500 aa19.07■□□□□ 0.64
CNOT4-208ENST00000465721 NCOA2Q15596 1464 aa19.07■□□□□ 0.64
CNOT4-208ENST00000465721 DEPDC5O75140 1603 aa19.06■□□□□ 0.64
CNOT4-208ENST00000465721 RNF17Q9BXT8 1623 aaKnown RBP19.06■□□□□ 0.64
CNOT4-208ENST00000465721 VWDEQ8N2E2 1590 aa19.06■□□□□ 0.64
CNOT4-208ENST00000465721 ZC3H13Q5T200 1668 aaKnown RBP19.05■□□□□ 0.64
CNOT4-208ENST00000465721 FOXD1Q16676 465 aa19.03■□□□□ 0.64
CNOT4-208ENST00000465721 SHANK2Q9UPX8 1470 aa19.03■□□□□ 0.64
CNOT4-208ENST00000465721 MED1Q15648 1581 aaPredicted RBP19.02■□□□□ 0.64
CNOT4-208ENST00000465721 IQGAP1P46940 1657 aa19.02■□□□□ 0.64
CNOT4-208ENST00000465721 STRCP1A6NGW2 1772 aa19.02■□□□□ 0.64
CNOT4-208ENST00000465721 FBXO31Q5XUX0 539 aaPredicted RBP19.02■□□□□ 0.64
CNOT4-208ENST00000465721 ALKQ9UM73 1620 aa19.02■□□□□ 0.64
CNOT4-208ENST00000465721 NLRP1Q9C000 1473 aa19.02■□□□□ 0.63
CNOT4-208ENST00000465721 UGGT1Q9NYU2 1555 aa19.01■□□□□ 0.63
CNOT4-208ENST00000465721 MAST1Q9Y2H9 1570 aa19.01■□□□□ 0.63
CNOT4-208ENST00000465721 EIF2AK4Q9P2K8 1649 aaKnown RBP19■□□□□ 0.63
CNOT4-208ENST00000465721 KIF3BO15066 747 aa19■□□□□ 0.63
CNOT4-208ENST00000465721 MED14O60244 1454 aa18.99■□□□□ 0.63
CNOT4-208ENST00000465721 CEP152O94986 1710 aa18.99■□□□□ 0.63
CNOT4-208ENST00000465721 MROH1Q8NDA8 1641 aa18.99■□□□□ 0.63
CNOT4-208ENST00000465721 CFAP65Q6ZU64 1925 aaKnown RBP18.98■□□□□ 0.63
CNOT4-208ENST00000465721 ABCC3O15438 1527 aa18.98■□□□□ 0.63
CNOT4-208ENST00000465721 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.97■□□□□ 0.63
CNOT4-208ENST00000465721 MIA2Q96PC5 1412 aa18.97■□□□□ 0.63
CNOT4-208ENST00000465721 SYNMO15061 1565 aa18.96■□□□□ 0.63
CNOT4-208ENST00000465721 NPHP4O75161 1426 aaPredicted RBP18.95■□□□□ 0.62
CNOT4-208ENST00000465721 WASHC2CQ9Y4E1 1318 aa18.95■□□□□ 0.62
CNOT4-208ENST00000465721 UBR1Q8IWV7 1749 aa18.94■□□□□ 0.62
CNOT4-208ENST00000465721 HSPA1LP34931 641 aa18.93■□□□□ 0.62
CNOT4-208ENST00000465721 RSPH4AQ5TD94 716 aa18.93■□□□□ 0.62
CNOT4-208ENST00000465721 ERVK-7P63135 1459 aa18.91■□□□□ 0.62
CNOT4-208ENST00000465721 ANKLE2Q86XL3 938 aa18.91■□□□□ 0.62
CNOT4-208ENST00000465721 LRRC9Q6ZRR7 1453 aa18.9■□□□□ 0.62
CNOT4-208ENST00000465721 CROCC2H7BZ55 1655 aa18.9■□□□□ 0.62
CNOT4-208ENST00000465721 PIP4K2BP78356 416 aa18.9■□□□□ 0.62
CNOT4-208ENST00000465721 SCAF1Q9H7N4 1312 aaKnown RBP18.9■□□□□ 0.62
CNOT4-208ENST00000465721 XIRP1Q702N8 1843 aaKnown RBP18.9■□□□□ 0.62
CNOT4-208ENST00000465721 TOM1O60784 492 aa18.89■□□□□ 0.61
CNOT4-208ENST00000465721 THEMISQ8N1K5 641 aaPredicted RBP18.89■□□□□ 0.61
CNOT4-208ENST00000465721 LRRC7Q96NW7 1537 aa18.88■□□□□ 0.61
CNOT4-208ENST00000465721 PRDM15P57071 1507 aaPredicted RBP18.86■□□□□ 0.61
CNOT4-208ENST00000465721 VPS8Q8N3P4 1428 aa18.86■□□□□ 0.61
CNOT4-208ENST00000465721 TSPY4P0CV99 314 aa18.84■□□□□ 0.61
CNOT4-208ENST00000465721 TSPY10P0CW01 314 aa18.84■□□□□ 0.61
CNOT4-208ENST00000465721 MAP3K1Q13233 1512 aa18.84■□□□□ 0.61
CNOT4-208ENST00000465721 DUOX2Q9NRD8 1548 aa18.84■□□□□ 0.61
CNOT4-208ENST00000465721 MYOM3Q5VTT5 1437 aa18.83■□□□□ 0.6
CNOT4-208ENST00000465721 SLIT1O75093 1534 aa18.82■□□□□ 0.6
CNOT4-208ENST00000465721 SCAF11Q99590 1463 aaKnown RBP18.81■□□□□ 0.6
CNOT4-208ENST00000465721 ARHGAP23Q9P227 1491 aa18.81■□□□□ 0.6
CNOT4-208ENST00000465721 PIK3C2BO00750 1634 aa18.8■□□□□ 0.6
CNOT4-208ENST00000465721 KDM5AP29375 1690 aaKnown RBP18.78■□□□□ 0.6
CNOT4-208ENST00000465721 ARHGAP31Q2M1Z3 1444 aa18.77■□□□□ 0.6
CNOT4-208ENST00000465721 ERBINQ96RT1 1412 aa18.75■□□□□ 0.59
CNOT4-208ENST00000465721 PTPN23Q9H3S7 1636 aa18.75■□□□□ 0.59
CNOT4-208ENST00000465721 KANK4Q5T7N3 995 aaPredicted RBP18.74■□□□□ 0.59
CNOT4-208ENST00000465721 KIF15Q9NS87 1388 aa18.73■□□□□ 0.59
CNOT4-208ENST00000465721 ABCC5O15440 1437 aa18.71■□□□□ 0.59
CNOT4-208ENST00000465721 LTKP29376 864 aa18.7■□□□□ 0.58
CNOT4-208ENST00000465721 LMTK2Q8IWU2 1503 aa18.69■□□□□ 0.58
CNOT4-208ENST00000465721 EFCAB6Q5THR3 1501 aa18.69■□□□□ 0.58
CNOT4-208ENST00000465721 DAPK1P53355 1430 aa18.67■□□□□ 0.58
CNOT4-208ENST00000465721 MYO5BQ9ULV0 1848 aa18.67■□□□□ 0.58
CNOT4-208ENST00000465721 TMEM2Q9UHN6 1383 aa18.67■□□□□ 0.58
CNOT4-208ENST00000465721 NWD1Q149M9 1564 aa18.66■□□□□ 0.58
CNOT4-208ENST00000465721 TET3O43151 1660 aa18.66■□□□□ 0.58
CNOT4-208ENST00000465721 ROBO1Q9Y6N7 1651 aa18.66■□□□□ 0.58
CNOT4-208ENST00000465721 ADGRB3O60242 1522 aa18.65■□□□□ 0.58
CNOT4-208ENST00000465721 TXNDC2Q86VQ3 553 aa18.65■□□□□ 0.58
CNOT4-208ENST00000465721 FGD6Q6ZV73 1430 aa18.63■□□□□ 0.57
CNOT4-208ENST00000465721 FAM135BQ49AJ0 1406 aa18.61■□□□□ 0.57
CNOT4-208ENST00000465721 LOC105371045A0A1W2PR82 267 aa18.61■□□□□ 0.57
CNOT4-208ENST00000465721 RRP7BPQ9NSQ0 103 aa18.61■□□□□ 0.57
CNOT4-208ENST00000465721 EID1Q9Y6B2 187 aa18.61■□□□□ 0.57
CNOT4-208ENST00000465721 NOS1P29475 1434 aa18.6■□□□□ 0.57
CNOT4-208ENST00000465721 KANK1Q14678 1352 aa18.6■□□□□ 0.57
CNOT4-208ENST00000465721 RGS17Q9UGC6 210 aaPredicted RBP18.6■□□□□ 0.57
CNOT4-208ENST00000465721 GCC2Q8IWJ2 1684 aa18.6■□□□□ 0.57
CNOT4-208ENST00000465721 NKTRP30414 1462 aaKnown RBP18.59■□□□□ 0.57
CNOT4-208ENST00000465721 TMEM94Q12767 1356 aa18.59■□□□□ 0.57
CNOT4-208ENST00000465721 CHD2O14647 1828 aaKnown RBP18.59■□□□□ 0.57
CNOT4-208ENST00000465721 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.58■□□□□ 0.562e-6■■□□□ 11.9
CNOT4-208ENST00000465721 ADGRL2O95490 1459 aa18.57■□□□□ 0.56
CNOT4-208ENST00000465721 ANKRD30AQ9BXX3 1397 aa18.55■□□□□ 0.56
CNOT4-208ENST00000465721 PHLPP1O60346 1717 aa18.55■□□□□ 0.56
CNOT4-208ENST00000465721 IDI1Q13907 227 aa18.55■□□□□ 0.56
CNOT4-208ENST00000465721 SETD1AO15047 1707 aaKnown RBP18.53■□□□□ 0.56
CNOT4-208ENST00000465721 KCNA6P17658 529 aa18.53■□□□□ 0.56
CNOT4-208ENST00000465721 STAG3Q9UJ98 1225 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms