RNA–Protein interactions for RNA: ENST00000465596.1

THBS3-205, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-205ENST00000465596 UNC13BO14795 1591 aa12.02□□□□□ -0.49
THBS3-205ENST00000465596 ARID4BQ4LE39 1312 aaPredicted RBP12.02□□□□□ -0.49
THBS3-205ENST00000465596 ERBINQ96RT1 1412 aa12.02□□□□□ -0.49
THBS3-205ENST00000465596 ABCC3O15438 1527 aa12.01□□□□□ -0.49
THBS3-205ENST00000465596 MYO3AQ8NEV4 1616 aa12.01□□□□□ -0.49
THBS3-205ENST00000465596 KIF15Q9NS87 1388 aa12□□□□□ -0.49
THBS3-205ENST00000465596 CNTLNQ9NXG0 1405 aa12□□□□□ -0.49
THBS3-205ENST00000465596 CFAP65Q6ZU64 1925 aaKnown RBP11.99□□□□□ -0.49
THBS3-205ENST00000465596 STRCQ7RTU9 1775 aa11.98□□□□□ -0.49
THBS3-205ENST00000465596 MLECQ14165 292 aa11.98□□□□□ -0.49
THBS3-205ENST00000465596 AEBP2Q6ZN18 517 aaPredicted RBP11.98□□□□□ -0.49
THBS3-205ENST00000465596 PPARGC1BQ86YN6 1023 aaKnown RBP11.98□□□□□ -0.49
THBS3-205ENST00000465596 LMTK2Q8IWU2 1503 aa11.96□□□□□ -0.49
THBS3-205ENST00000465596 ROCK1Q13464 1354 aa11.96□□□□□ -0.49
THBS3-205ENST00000465596 TSPY4P0CV99 314 aa11.96□□□□□ -0.49
THBS3-205ENST00000465596 TSPY10P0CW01 314 aa11.96□□□□□ -0.49
THBS3-205ENST00000465596 MYT1LQ9UL68 1186 aa11.96□□□□□ -0.49
THBS3-205ENST00000465596 IQGAP3Q86VI3 1631 aa11.96□□□□□ -0.5
THBS3-205ENST00000465596 PZPP20742 1482 aa11.95□□□□□ -0.5
THBS3-205ENST00000465596 NPATQ14207 1427 aa11.95□□□□□ -0.5
THBS3-205ENST00000465596 SPATA31D1Q6ZQQ2 1576 aa11.95□□□□□ -0.5
THBS3-205ENST00000465596 ANKRD30AQ9BXX3 1397 aa11.94□□□□□ -0.5
THBS3-205ENST00000465596 TET3O43151 1660 aa11.94□□□□□ -0.5
THBS3-205ENST00000465596 EFCAB6Q5THR3 1501 aa11.94□□□□□ -0.5
THBS3-205ENST00000465596 E9PCH4 1651 aa11.93□□□□□ -0.5
THBS3-205ENST00000465596 ZMYM3Q14202 1370 aa11.92□□□□□ -0.5
THBS3-205ENST00000465596 CEP170BQ9Y4F5 1589 aaPredicted RBP11.92□□□□□ -0.5
THBS3-205ENST00000465596 CEBPAP49715 358 aaPredicted RBP11.92□□□□□ -0.5
THBS3-205ENST00000465596 FAM50AQ14320 339 aaKnown RBP11.92□□□□□ -0.5
THBS3-205ENST00000465596 PPP6R1Q9UPN7 881 aa11.92□□□□□ -0.5
THBS3-205ENST00000465596 KIF3BO15066 747 aa11.91□□□□□ -0.5
THBS3-205ENST00000465596 ANKRD50Q9ULJ7 1429 aa11.91□□□□□ -0.5
THBS3-205ENST00000465596 SYNMO15061 1565 aa11.91□□□□□ -0.5
THBS3-205ENST00000465596 POLR1AO95602 1720 aaPredicted RBP11.91□□□□□ -0.5
THBS3-205ENST00000465596 UBR1Q8IWV7 1749 aa11.91□□□□□ -0.5
THBS3-205ENST00000465596 MYO5BQ9ULV0 1848 aa11.9□□□□□ -0.5
THBS3-205ENST00000465596 ARHGAP31Q2M1Z3 1444 aa11.9□□□□□ -0.5
THBS3-205ENST00000465596 RRP7BPQ9NSQ0 103 aa11.9□□□□□ -0.5
THBS3-205ENST00000465596 KDM5AP29375 1690 aaKnown RBP11.9□□□□□ -0.5
THBS3-205ENST00000465596 NAIPQ13075 1403 aa11.89□□□□□ -0.51
THBS3-205ENST00000465596 GGT6Q6P531 493 aa11.89□□□□□ -0.51
THBS3-205ENST00000465596 CHIC2Q9UKJ5 165 aa11.89□□□□□ -0.51
THBS3-205ENST00000465596 PIK3C2BO00750 1634 aa11.89□□□□□ -0.51
THBS3-205ENST00000465596 ERVK-7P63135 1459 aa11.89□□□□□ -0.51
THBS3-205ENST00000465596 HFM1A2PYH4 1435 aa11.86□□□□□ -0.51
THBS3-205ENST00000465596 UHRF1BP1Q6BDS2 1440 aa11.86□□□□□ -0.51
THBS3-205ENST00000465596 SPHKAPQ2M3C7 1700 aa11.86□□□□□ -0.51
THBS3-205ENST00000465596 NEURL4Q96JN8 1562 aa11.85□□□□□ -0.51
THBS3-205ENST00000465596 A2ML1A8K2U0 1454 aa11.85□□□□□ -0.51
THBS3-205ENST00000465596 NOS1P29475 1434 aa11.84□□□□□ -0.51
THBS3-205ENST00000465596 RPRD2Q5VT52 1461 aaKnown RBP11.83□□□□□ -0.52
THBS3-205ENST00000465596 WASHC2CQ9Y4E1 1318 aa11.83□□□□□ -0.52
THBS3-205ENST00000465596 NLRP1Q9C000 1473 aa11.83□□□□□ -0.52
THBS3-205ENST00000465596 FBXO31Q5XUX0 539 aaPredicted RBP11.82□□□□□ -0.52
THBS3-205ENST00000465596 PLA2R1Q13018 1463 aa11.82□□□□□ -0.52
THBS3-205ENST00000465596 TNRQ92752 1358 aa11.81□□□□□ -0.52
THBS3-205ENST00000465596 TMEM131LA2VDJ0 1609 aa11.8□□□□□ -0.52
THBS3-205ENST00000465596 HSPA2P54652 639 aa11.8□□□□□ -0.52
THBS3-205ENST00000465596 PLPPR3Q6T4P5 718 aa11.8□□□□□ -0.52
THBS3-205ENST00000465596 ESF1Q9H501 851 aaKnown RBP11.79□□□□□ -0.52
THBS3-205ENST00000465596 ADGRB3O60242 1522 aa11.79□□□□□ -0.52
THBS3-205ENST00000465596 UGGT1Q9NYU2 1555 aa11.79□□□□□ -0.52
THBS3-205ENST00000465596 ITGAEP38570 1179 aa11.78□□□□□ -0.52
THBS3-205ENST00000465596 KANK1Q14678 1352 aa11.78□□□□□ -0.52
THBS3-205ENST00000465596 ARHGAP23Q9P227 1491 aa11.77□□□□□ -0.52
THBS3-205ENST00000465596 SLIT1O75093 1534 aa11.77□□□□□ -0.52
THBS3-205ENST00000465596 CLTCL1P53675 1640 aa11.77□□□□□ -0.53
THBS3-205ENST00000465596 IQGAP1P46940 1657 aa11.76□□□□□ -0.53
THBS3-205ENST00000465596 STRCP1A6NGW2 1772 aa11.76□□□□□ -0.53
THBS3-205ENST00000465596 TRPM2O94759 1503 aa11.76□□□□□ -0.53
THBS3-205ENST00000465596 PTPRTO14522 1441 aa11.75□□□□□ -0.53
THBS3-205ENST00000465596 KIF1BO60333 1816 aa11.74□□□□□ -0.53
THBS3-205ENST00000465596 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.74□□□□□ -0.53
THBS3-205ENST00000465596 MED14O60244 1454 aa11.74□□□□□ -0.53
THBS3-205ENST00000465596 LTBP4Q8N2S1 1624 aa11.73□□□□□ -0.53
THBS3-205ENST00000465596 IFT172Q9UG01 1749 aa11.72□□□□□ -0.53
THBS3-205ENST00000465596 NUP155O75694 1391 aa11.72□□□□□ -0.53
THBS3-205ENST00000465596 XIRP1Q702N8 1843 aaKnown RBP11.71□□□□□ -0.54
THBS3-205ENST00000465596 ZFYVE9O95405 1425 aa11.69□□□□□ -0.54
THBS3-205ENST00000465596 PPLO60437 1756 aa11.69□□□□□ -0.54
THBS3-205ENST00000465596 NRXN3Q9Y4C0 1643 aa11.69□□□□□ -0.54
THBS3-205ENST00000465596 SETD1AO15047 1707 aaKnown RBP11.69□□□□□ -0.54
THBS3-205ENST00000465596 SETD5Q9C0A6 1442 aa11.69□□□□□ -0.54
THBS3-205ENST00000465596 SCAF11Q99590 1463 aaKnown RBP11.67□□□□□ -0.54
THBS3-205ENST00000465596 RAB3GAP2Q9H2M9 1393 aa11.67□□□□□ -0.54
THBS3-205ENST00000465596 NEXMIFQ5QGS0 1516 aa11.66□□□□□ -0.54
THBS3-205ENST00000465596 CHD2O14647 1828 aaKnown RBP11.66□□□□□ -0.54
THBS3-205ENST00000465596 IDI1Q13907 227 aa11.66□□□□□ -0.54
THBS3-205ENST00000465596 TMEM2Q9UHN6 1383 aa11.66□□□□□ -0.54
THBS3-205ENST00000465596 NCKAP5LQ9HCH0 1330 aa11.65□□□□□ -0.54
THBS3-205ENST00000465596 NWD1Q149M9 1564 aa11.64□□□□□ -0.55
THBS3-205ENST00000465596 NPHP4O75161 1426 aaPredicted RBP11.64□□□□□ -0.55
THBS3-205ENST00000465596 PKD2Q13563 968 aa11.64□□□□□ -0.55
THBS3-205ENST00000465596 SLC52A1Q9NWF4 448 aa11.63□□□□□ -0.55
THBS3-205ENST00000465596 LTKP29376 864 aa11.62□□□□□ -0.55
THBS3-205ENST00000465596 THEMISQ8N1K5 641 aaPredicted RBP11.62□□□□□ -0.55
THBS3-205ENST00000465596 SETBP1Q9Y6X0 1596 aa11.62□□□□□ -0.55
THBS3-205ENST00000465596 ALKQ9UM73 1620 aa11.6□□□□□ -0.55
THBS3-205ENST00000465596 DIP2AQ14689 1571 aa11.6□□□□□ -0.55
THBS3-205ENST00000465596 XRN1Q8IZH2 1706 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms