RNA–Protein interactions for RNA: ENST00000465590.1

SKIL-205, Transcript of SKI like proto-oncogene, humanhuman

TSL 1 (best)

Gene SKIL, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIL-205ENST00000465590 PPP6R1Q9UPN7 881 aa36.37■■■■□ 3.41
SKIL-205ENST00000465590 CNTLNQ9NXG0 1405 aa36.33■■■■□ 3.41
SKIL-205ENST00000465590 RNF17Q9BXT8 1623 aaKnown RBP36.28■■■■□ 3.4
SKIL-205ENST00000465590 ANKRD50Q9ULJ7 1429 aa36.25■■■■□ 3.39
SKIL-205ENST00000465590 FAM135AQ9P2D6 1515 aa36.24■■■■□ 3.39
SKIL-205ENST00000465590 CLTCQ00610 1675 aaKnown RBP36.21■■■■□ 3.39
SKIL-205ENST00000465590 PLPPR3Q6T4P5 718 aa36.21■■■■□ 3.39
SKIL-205ENST00000465590 MROH2AA6NES4 1674 aa36.2■■■■□ 3.39
SKIL-205ENST00000465590 WASHC2CQ9Y4E1 1318 aa36.2■■■■□ 3.39
SKIL-205ENST00000465590 KDM5DQ9BY66 1539 aa36.19■■■■□ 3.38
SKIL-205ENST00000465590 CEBPAP49715 358 aaPredicted RBP36.17■■■■□ 3.38
SKIL-205ENST00000465590 ZMYM3Q14202 1370 aa36.16■■■■□ 3.38
SKIL-205ENST00000465590 MROH1Q8NDA8 1641 aa36.16■■■■□ 3.38
SKIL-205ENST00000465590 DEPDC5O75140 1603 aa36.15■■■■□ 3.38
SKIL-205ENST00000465590 C3P01024 1663 aa36.14■■■■□ 3.38
SKIL-205ENST00000465590 PRDM15P57071 1507 aaPredicted RBP36.13■■■■□ 3.38
SKIL-205ENST00000465590 GRWD1Q9BQ67 446 aaKnown RBP eCLIP36.12■■■■□ 3.37
SKIL-205ENST00000465590 KANK1Q14678 1352 aa36.12■■■■□ 3.37
SKIL-205ENST00000465590 ZC3H13Q5T200 1668 aaKnown RBP36.1■■■■□ 3.37
SKIL-205ENST00000465590 ABCC3O15438 1527 aa36.09■■■■□ 3.37
SKIL-205ENST00000465590 NAIPQ13075 1403 aa36.07■■■■□ 3.36
SKIL-205ENST00000465590 HFM1A2PYH4 1435 aa36.06■■■■□ 3.36
SKIL-205ENST00000465590 GCC2Q8IWJ2 1684 aa36.03■■■■□ 3.36
SKIL-205ENST00000465590 CEP152O94986 1710 aa36.02■■■■□ 3.36
SKIL-205ENST00000465590 NPATQ14207 1427 aa36.01■■■■□ 3.36
SKIL-205ENST00000465590 VWDEQ8N2E2 1590 aa36.01■■■■□ 3.35
SKIL-205ENST00000465590 UNC13BO14795 1591 aa36■■■■□ 3.35
SKIL-205ENST00000465590 PZPP20742 1482 aa35.99■■■■□ 3.35
SKIL-205ENST00000465590 SETD1BQ9UPS6 1966 aaKnown RBP35.98■■■■□ 3.35
SKIL-205ENST00000465590 CAMSAP1Q5T5Y3 1602 aa35.97■■■■□ 3.35
SKIL-205ENST00000465590 LMTK2Q8IWU2 1503 aa35.96■■■■□ 3.35
SKIL-205ENST00000465590 ARHGAP31Q2M1Z3 1444 aa35.91■■■■□ 3.34
SKIL-205ENST00000465590 PREX1Q8TCU6 1659 aa35.91■■■■□ 3.34
SKIL-205ENST00000465590 NUP155O75694 1391 aa35.9■■■■□ 3.34
SKIL-205ENST00000465590 FBXO31Q5XUX0 539 aaPredicted RBP35.9■■■■□ 3.34
SKIL-205ENST00000465590 UHRF1BP1Q6BDS2 1440 aa35.88■■■■□ 3.33
SKIL-205ENST00000465590 LMTK3Q96Q04 1460 aa35.86■■■■□ 3.33
SKIL-205ENST00000465590 IQGAP3Q86VI3 1631 aa35.86■■■■□ 3.33
SKIL-205ENST00000465590 EFCAB6Q5THR3 1501 aa35.84■■■■□ 3.33
SKIL-205ENST00000465590 TNRQ92752 1358 aa35.84■■■■□ 3.33
SKIL-205ENST00000465590 TET3O43151 1660 aa35.83■■■■□ 3.33
SKIL-205ENST00000465590 ERVK-7P63135 1459 aa35.81■■■■□ 3.32
SKIL-205ENST00000465590 SETD5Q9C0A6 1442 aa35.81■■■■□ 3.32
SKIL-205ENST00000465590 SPATA31D1Q6ZQQ2 1576 aa35.8■■■■□ 3.32
SKIL-205ENST00000465590 TRIM52Q96A61 297 aa35.78■■■■□ 3.32
SKIL-205ENST00000465590 CFAP65Q6ZU64 1925 aaKnown RBP35.78■■■■□ 3.32
SKIL-205ENST00000465590 MYO3AQ8NEV4 1616 aa35.77■■■■□ 3.32
SKIL-205ENST00000465590 RPRD2Q5VT52 1461 aaKnown RBP35.77■■■■□ 3.32
SKIL-205ENST00000465590 ACIN1Q9UKV3 1341 aaKnown RBP35.75■■■■□ 3.31
SKIL-205ENST00000465590 NLRP1Q9C000 1473 aa35.71■■■■□ 3.31
SKIL-205ENST00000465590 HSPA2P54652 639 aa35.7■■■■□ 3.31
SKIL-205ENST00000465590 ZNF142P52746 1687 aaPredicted RBP35.69■■■■□ 3.3
SKIL-205ENST00000465590 CEP170BQ9Y4F5 1589 aaPredicted RBP35.69■■■■□ 3.3
SKIL-205ENST00000465590 A2ML1A8K2U0 1454 aa35.69■■■■□ 3.3
SKIL-205ENST00000465590 E9PCH4 1651 aa35.68■■■■□ 3.3
SKIL-205ENST00000465590 RAB3GAP2Q9H2M9 1393 aa35.67■■■■□ 3.3
SKIL-205ENST00000465590 NOS1P29475 1434 aa35.66■■■■□ 3.3
SKIL-205ENST00000465590 TRIM26Q12899 539 aaPredicted RBP35.62■■■■□ 3.29
SKIL-205ENST00000465590 SLC4A1APQ9BWU0 796 aaKnown RBP35.62■■■■□ 3.29
SKIL-205ENST00000465590 SYNMO15061 1565 aa35.59■■■■□ 3.29
SKIL-205ENST00000465590 HRCP23327 699 aa35.58■■■■□ 3.29
SKIL-205ENST00000465590 SLC52A1Q9NWF4 448 aa35.57■■■■□ 3.28
SKIL-205ENST00000465590 UGGT1Q9NYU2 1555 aa35.56■■■■□ 3.28
SKIL-205ENST00000465590 PKD2Q13563 968 aa35.56■■■■□ 3.28
SKIL-205ENST00000465590 THEMISQ8N1K5 641 aaPredicted RBP35.55■■■■□ 3.28
SKIL-205ENST00000465590 IDI1Q13907 227 aa35.53■■■■□ 3.28
SKIL-205ENST00000465590 MPHOSPH9Q99550 1183 aa35.52■■■■□ 3.28
SKIL-205ENST00000465590 PLA2R1Q13018 1463 aa35.49■■■■□ 3.27
SKIL-205ENST00000465590 PIK3C2BO00750 1634 aa35.49■■■■□ 3.27
SKIL-205ENST00000465590 PTPRTO14522 1441 aa35.49■■■■□ 3.27
SKIL-205ENST00000465590 STAG3Q9UJ98 1225 aa35.48■■■■□ 3.27
SKIL-205ENST00000465590 SPHKAPQ2M3C7 1700 aa35.48■■■■□ 3.27
SKIL-205ENST00000465590 UBR1Q8IWV7 1749 aa35.46■■■■□ 3.27
SKIL-205ENST00000465590 KDM5AP29375 1690 aaKnown RBP35.43■■■■□ 3.26
SKIL-205ENST00000465590 STRCQ7RTU9 1775 aa35.43■■■■□ 3.26
SKIL-205ENST00000465590 DMRT2Q9Y5R5 561 aa35.4■■■■□ 3.26
SKIL-205ENST00000465590 ADGRB3O60242 1522 aa35.4■■■■□ 3.26
SKIL-205ENST00000465590 TRPM2O94759 1503 aa35.4■■■■□ 3.26
SKIL-205ENST00000465590 FOXD1Q16676 465 aa35.38■■■■□ 3.25
SKIL-205ENST00000465590 NCKAP5LQ9HCH0 1330 aa35.37■■■■□ 3.25
SKIL-205ENST00000465590 ANKLE2Q86XL3 938 aa35.37■■■■□ 3.25
SKIL-205ENST00000465590 CHGAP10645 457 aaKnown RBP35.33■■■■□ 3.25
SKIL-205ENST00000465590 SLIT1O75093 1534 aa35.32■■■■□ 3.25
SKIL-205ENST00000465590 TMEM2Q9UHN6 1383 aa35.32■■■■□ 3.24
SKIL-205ENST00000465590 TMEM131LA2VDJ0 1609 aa35.32■■■■□ 3.24
SKIL-205ENST00000465590 ARHGAP23Q9P227 1491 aa35.31■■■■□ 3.24
SKIL-205ENST00000465590 POLR1AO95602 1720 aaPredicted RBP35.3■■■■□ 3.24
SKIL-205ENST00000465590 CLTCL1P53675 1640 aa35.29■■■■□ 3.24
SKIL-205ENST00000465590 EID1Q9Y6B2 187 aa35.28■■■■□ 3.24
SKIL-205ENST00000465590 MYO5BQ9ULV0 1848 aa35.25■■■■□ 3.23
SKIL-205ENST00000465590 TXNDC2Q86VQ3 553 aa35.25■■■■□ 3.23
SKIL-205ENST00000465590 SCAF11Q99590 1463 aaKnown RBP35.23■■■■□ 3.23
SKIL-205ENST00000465590 CCDC144AA2RUR9 1427 aa35.23■■■■□ 3.23
SKIL-205ENST00000465590 NEURL4Q96JN8 1562 aa35.22■■■■□ 3.23
SKIL-205ENST00000465590 LTKP29376 864 aa35.22■■■■□ 3.23
SKIL-205ENST00000465590 HDGFP51858 240 aaKnown RBP35.22■■■■□ 3.23
SKIL-205ENST00000465590 MED14O60244 1454 aa35.22■■■■□ 3.23
SKIL-205ENST00000465590 KIF1BO60333 1816 aa35.21■■■■□ 3.23
SKIL-205ENST00000465590 NPHP4O75161 1426 aaPredicted RBP35.19■■■■□ 3.22
SKIL-205ENST00000465590 RIMS2Q9UQ26 1411 aa35.18■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms