RNA–Protein interactions for RNA: ENST00000465556.1

TMCO3-205, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 3

Gene TMCO3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-205ENST00000465556 DUOX2Q9NRD8 1548 aa18.74■□□□□ 0.59
TMCO3-205ENST00000465556 MROH1Q8NDA8 1641 aa18.74■□□□□ 0.59
TMCO3-205ENST00000465556 HSPA2P54652 639 aa18.73■□□□□ 0.59
TMCO3-205ENST00000465556 GGT6Q6P531 493 aa18.73■□□□□ 0.59
TMCO3-205ENST00000465556 CEP152O94986 1710 aa18.73■□□□□ 0.59
TMCO3-205ENST00000465556 STRCQ7RTU9 1775 aa18.73■□□□□ 0.59
TMCO3-205ENST00000465556 ZMYM3Q14202 1370 aa18.72■□□□□ 0.59
TMCO3-205ENST00000465556 KIF3BO15066 747 aa18.7■□□□□ 0.58
TMCO3-205ENST00000465556 DEPDC5O75140 1603 aa18.7■□□□□ 0.58
TMCO3-205ENST00000465556 PTPRKQ15262 1439 aa18.69■□□□□ 0.58
TMCO3-205ENST00000465556 PPP6R1Q9UPN7 881 aa18.69■□□□□ 0.58
TMCO3-205ENST00000465556 KIF15Q9NS87 1388 aa18.68■□□□□ 0.58
TMCO3-205ENST00000465556 CEP170BQ9Y4F5 1589 aaPredicted RBP18.68■□□□□ 0.58
TMCO3-205ENST00000465556 ABCC3O15438 1527 aa18.68■□□□□ 0.58
TMCO3-205ENST00000465556 PRDM15P57071 1507 aaPredicted RBP18.68■□□□□ 0.58
TMCO3-205ENST00000465556 CAMSAP1Q5T5Y3 1602 aa18.67■□□□□ 0.58
TMCO3-205ENST00000465556 ERBINQ96RT1 1412 aa18.66■□□□□ 0.58
TMCO3-205ENST00000465556 PZPP20742 1482 aa18.66■□□□□ 0.58
TMCO3-205ENST00000465556 ADGRL2O95490 1459 aa18.65■□□□□ 0.58
TMCO3-205ENST00000465556 CFAP65Q6ZU64 1925 aaKnown RBP18.63■□□□□ 0.57
TMCO3-205ENST00000465556 ANKRD30AQ9BXX3 1397 aa18.61■□□□□ 0.57
TMCO3-205ENST00000465556 NCOA1Q15788 1441 aa18.59■□□□□ 0.57
TMCO3-205ENST00000465556 WASHC2CQ9Y4E1 1318 aa18.59■□□□□ 0.57
TMCO3-205ENST00000465556 FAM50AQ14320 339 aaKnown RBP18.59■□□□□ 0.57
TMCO3-205ENST00000465556 POLR1AO95602 1720 aaPredicted RBP18.59■□□□□ 0.57
TMCO3-205ENST00000465556 SPATA31D1Q6ZQQ2 1576 aa18.59■□□□□ 0.57
TMCO3-205ENST00000465556 A2ML1A8K2U0 1454 aa18.58■□□□□ 0.57
TMCO3-205ENST00000465556 RRP7BPQ9NSQ0 103 aa18.57■□□□□ 0.56
TMCO3-205ENST00000465556 TNRQ92752 1358 aa18.56■□□□□ 0.56
TMCO3-205ENST00000465556 VWDEQ8N2E2 1590 aa18.56■□□□□ 0.56
TMCO3-205ENST00000465556 PLA2R1Q13018 1463 aa18.56■□□□□ 0.56
TMCO3-205ENST00000465556 ERVK-7P63135 1459 aa18.55■□□□□ 0.56
TMCO3-205ENST00000465556 CHIC2Q9UKJ5 165 aa18.55■□□□□ 0.56
TMCO3-205ENST00000465556 NLRP1Q9C000 1473 aa18.52■□□□□ 0.56
TMCO3-205ENST00000465556 UNC13BO14795 1591 aa18.52■□□□□ 0.56
TMCO3-205ENST00000465556 PTPRTO14522 1441 aa18.52■□□□□ 0.56
TMCO3-205ENST00000465556 FBXO31Q5XUX0 539 aaPredicted RBP18.52■□□□□ 0.56
TMCO3-205ENST00000465556 LMTK2Q8IWU2 1503 aa18.52■□□□□ 0.56
TMCO3-205ENST00000465556 EFCAB6Q5THR3 1501 aa18.51■□□□□ 0.55
TMCO3-205ENST00000465556 PPARGC1BQ86YN6 1023 aaKnown RBP18.51■□□□□ 0.55
TMCO3-205ENST00000465556 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.5■□□□□ 0.55
TMCO3-205ENST00000465556 ARHGAP31Q2M1Z3 1444 aa18.49■□□□□ 0.55
TMCO3-205ENST00000465556 ANKRD50Q9ULJ7 1429 aa18.49■□□□□ 0.55
TMCO3-205ENST00000465556 UBR1Q8IWV7 1749 aa18.49■□□□□ 0.55
TMCO3-205ENST00000465556 GCC2Q8IWJ2 1684 aa18.49■□□□□ 0.55
TMCO3-205ENST00000465556 TET3O43151 1660 aa18.48■□□□□ 0.55
TMCO3-205ENST00000465556 NEURL4Q96JN8 1562 aa18.48■□□□□ 0.55
TMCO3-205ENST00000465556 UGGT1Q9NYU2 1555 aa18.48■□□□□ 0.55
TMCO3-205ENST00000465556 KANK1Q14678 1352 aa18.48■□□□□ 0.55
TMCO3-205ENST00000465556 DMRT2Q9Y5R5 561 aa18.48■□□□□ 0.55
TMCO3-205ENST00000465556 ROCK1Q13464 1354 aa18.47■□□□□ 0.55
TMCO3-205ENST00000465556 RRBP1Q9P2E9 1410 aaKnown RBP18.47■□□□□ 0.55
TMCO3-205ENST00000465556 ILDR1Q86SU0 546 aaPredicted RBP18.44■□□□□ 0.54
TMCO3-205ENST00000465556 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.44■□□□□ 0.54
TMCO3-205ENST00000465556 PIK3C2BO00750 1634 aa18.44■□□□□ 0.54
TMCO3-205ENST00000465556 IQGAP3Q86VI3 1631 aa18.44■□□□□ 0.54
TMCO3-205ENST00000465556 SYNMO15061 1565 aa18.43■□□□□ 0.54
TMCO3-205ENST00000465556 KDM5AP29375 1690 aaKnown RBP18.43■□□□□ 0.54
TMCO3-205ENST00000465556 LTBP4Q8N2S1 1624 aa18.41■□□□□ 0.54
TMCO3-205ENST00000465556 PKD2Q13563 968 aa18.41■□□□□ 0.54
TMCO3-205ENST00000465556 NCKAP5LQ9HCH0 1330 aa18.41■□□□□ 0.54
TMCO3-205ENST00000465556 IQGAP1P46940 1657 aa18.41■□□□□ 0.54
TMCO3-205ENST00000465556 E9PCH4 1651 aa18.4■□□□□ 0.54
TMCO3-205ENST00000465556 RPRD2Q5VT52 1461 aaKnown RBP18.39■□□□□ 0.53
TMCO3-205ENST00000465556 MYO5BQ9ULV0 1848 aa18.38■□□□□ 0.53
TMCO3-205ENST00000465556 ITGAEP38570 1179 aa18.38■□□□□ 0.53
TMCO3-205ENST00000465556 NOS1P29475 1434 aa18.36■□□□□ 0.53
TMCO3-205ENST00000465556 FBXO41Q8TF61 875 aa18.36■□□□□ 0.53
TMCO3-205ENST00000465556 ADGRB3O60242 1522 aa18.35■□□□□ 0.53
TMCO3-205ENST00000465556 MED14O60244 1454 aa18.35■□□□□ 0.53
TMCO3-205ENST00000465556 THEMISQ8N1K5 641 aaPredicted RBP18.35■□□□□ 0.53
TMCO3-205ENST00000465556 CERKQ8TCT0 537 aa18.35■□□□□ 0.53
TMCO3-205ENST00000465556 SLIT1O75093 1534 aa18.34■□□□□ 0.53
TMCO3-205ENST00000465556 ARHGAP23Q9P227 1491 aa18.33■□□□□ 0.53
TMCO3-205ENST00000465556 IQSEC2Q5JU85 1478 aa18.32■□□□□ 0.52
TMCO3-205ENST00000465556 NPHP4O75161 1426 aaPredicted RBP18.32■□□□□ 0.52
TMCO3-205ENST00000465556 SPHKAPQ2M3C7 1700 aa18.31■□□□□ 0.52
TMCO3-205ENST00000465556 SCAF11Q99590 1463 aaKnown RBP18.31■□□□□ 0.52
TMCO3-205ENST00000465556 ZNF335Q9H4Z2 1342 aaPredicted RBP18.29■□□□□ 0.52
TMCO3-205ENST00000465556 ANKLE2Q86XL3 938 aa18.29■□□□□ 0.52
TMCO3-205ENST00000465556 NAIPQ13075 1403 aa18.29■□□□□ 0.52
TMCO3-205ENST00000465556 STRCP1A6NGW2 1772 aa18.28■□□□□ 0.52
TMCO3-205ENST00000465556 TMEM131LA2VDJ0 1609 aa18.27■□□□□ 0.52
TMCO3-205ENST00000465556 HFM1A2PYH4 1435 aa18.26■□□□□ 0.51
TMCO3-205ENST00000465556 CPS1P31327 1500 aa18.26■□□□□ 0.51
TMCO3-205ENST00000465556 NUP155O75694 1391 aa18.26■□□□□ 0.51
TMCO3-205ENST00000465556 TMEM2Q9UHN6 1383 aa18.24■□□□□ 0.51
TMCO3-205ENST00000465556 IDI1Q13907 227 aa18.23■□□□□ 0.51
TMCO3-205ENST00000465556 SLC52A1Q9NWF4 448 aa18.21■□□□□ 0.51
TMCO3-205ENST00000465556 STAG3Q9UJ98 1225 aa18.2■□□□□ 0.5
TMCO3-205ENST00000465556 LTKP29376 864 aa18.19■□□□□ 0.5
TMCO3-205ENST00000465556 ZFYVE9O95405 1425 aa18.18■□□□□ 0.5
TMCO3-205ENST00000465556 CLTCL1P53675 1640 aa18.17■□□□□ 0.5
TMCO3-205ENST00000465556 KIF1BO60333 1816 aa18.17■□□□□ 0.5
TMCO3-205ENST00000465556 XIRP1Q702N8 1843 aaKnown RBP18.17■□□□□ 0.5
TMCO3-205ENST00000465556 TXNDC2Q86VQ3 553 aa18.17■□□□□ 0.5
TMCO3-205ENST00000465556 EID1Q9Y6B2 187 aa18.17■□□□□ 0.5
TMCO3-205ENST00000465556 TRPM2O94759 1503 aa18.17■□□□□ 0.5
TMCO3-205ENST00000465556 RIMS2Q9UQ26 1411 aa18.14■□□□□ 0.49
TMCO3-205ENST00000465556 NWD1Q149M9 1564 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms