RNA–Protein interactions for RNA: ENST00000465459.2

HLA-F-223, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-223ENST00000465459 FAM135AQ9P2D6 1515 aa21.97■■□□□ 1.11
HLA-F-223ENST00000465459 GGT6Q6P531 493 aa21.97■■□□□ 1.11
HLA-F-223ENST00000465459 DEPDC5O75140 1603 aa21.96■■□□□ 1.11
HLA-F-223ENST00000465459 MLECQ14165 292 aa21.94■■□□□ 1.1
HLA-F-223ENST00000465459 KANK1Q14678 1352 aa21.94■■□□□ 1.1
HLA-F-223ENST00000465459 PRDM15P57071 1507 aaPredicted RBP21.94■■□□□ 1.1
HLA-F-223ENST00000465459 UNC13BO14795 1591 aa21.93■■□□□ 1.1
HLA-F-223ENST00000465459 RAB3GAP2Q9H2M9 1393 aa21.93■■□□□ 1.1
HLA-F-223ENST00000465459 MROH1Q8NDA8 1641 aa21.92■■□□□ 1.1
HLA-F-223ENST00000465459 KDM5DQ9BY66 1539 aa21.91■■□□□ 1.1
HLA-F-223ENST00000465459 CNTLNQ9NXG0 1405 aa21.91■■□□□ 1.1
HLA-F-223ENST00000465459 PCGF6Q9BYE7 350 aa21.91■■□□□ 1.1
HLA-F-223ENST00000465459 ESF1Q9H501 851 aaKnown RBP21.9■■□□□ 1.1
HLA-F-223ENST00000465459 ADAMTSL3P82987 1691 aa21.9■■□□□ 1.1
HLA-F-223ENST00000465459 WASHC2CQ9Y4E1 1318 aa21.89■■□□□ 1.1
HLA-F-223ENST00000465459 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.89■■□□□ 1.09
HLA-F-223ENST00000465459 VWDEQ8N2E2 1590 aa21.89■■□□□ 1.09
HLA-F-223ENST00000465459 NUP155O75694 1391 aa21.88■■□□□ 1.09
HLA-F-223ENST00000465459 ZC3H13Q5T200 1668 aaKnown RBP21.87■■□□□ 1.09
HLA-F-223ENST00000465459 LMTK2Q8IWU2 1503 aa21.86■■□□□ 1.09
HLA-F-223ENST00000465459 ABCC3O15438 1527 aa21.85■■□□□ 1.09
HLA-F-223ENST00000465459 TRIM52Q96A61 297 aa21.85■■□□□ 1.09
HLA-F-223ENST00000465459 FER1L4A9Z1Z3 1794 aa21.84■■□□□ 1.09
HLA-F-223ENST00000465459 IQGAP3Q86VI3 1631 aa21.84■■□□□ 1.09
HLA-F-223ENST00000465459 MADDQ8WXG6 1647 aa21.82■■□□□ 1.08
HLA-F-223ENST00000465459 MROH2AA6NES4 1674 aa21.82■■□□□ 1.08
HLA-F-223ENST00000465459 ARHGAP31Q2M1Z3 1444 aa21.8■■□□□ 1.08
HLA-F-223ENST00000465459 KDM4FA0A1W2PPD8 638 aa21.8■■□□□ 1.08
HLA-F-223ENST00000465459 CLTCQ00610 1675 aaKnown RBP21.79■■□□□ 1.08
HLA-F-223ENST00000465459 ZMYM3Q14202 1370 aa21.79■■□□□ 1.08
HLA-F-223ENST00000465459 TET3O43151 1660 aa21.78■■□□□ 1.08
HLA-F-223ENST00000465459 CEP152O94986 1710 aa21.77■■□□□ 1.08
HLA-F-223ENST00000465459 PZPP20742 1482 aa21.77■■□□□ 1.08
HLA-F-223ENST00000465459 EFCAB6Q5THR3 1501 aa21.76■■□□□ 1.07
HLA-F-223ENST00000465459 SLC4A1APQ9BWU0 796 aaKnown RBP21.76■■□□□ 1.07
HLA-F-223ENST00000465459 CAMSAP1Q5T5Y3 1602 aa21.76■■□□□ 1.07
HLA-F-223ENST00000465459 RPRD2Q5VT52 1461 aaKnown RBP21.76■■□□□ 1.07
HLA-F-223ENST00000465459 RIMS1Q86UR5 1692 aaKnown RBP21.75■■□□□ 1.07
HLA-F-223ENST00000465459 MPHOSPH9Q99550 1183 aa21.75■■□□□ 1.07
HLA-F-223ENST00000465459 PTPRMP28827 1452 aa21.74■■□□□ 1.07
HLA-F-223ENST00000465459 NPATQ14207 1427 aa21.72■■□□□ 1.07
HLA-F-223ENST00000465459 PKD2Q13563 968 aa21.7■■□□□ 1.06
HLA-F-223ENST00000465459 C3P01024 1663 aa21.69■■□□□ 1.06
HLA-F-223ENST00000465459 E9PCH4 1651 aa21.67■■□□□ 1.06
HLA-F-223ENST00000465459 CEBPAP49715 358 aaPredicted RBP21.67■■□□□ 1.06
HLA-F-223ENST00000465459 ERVK-7P63135 1459 aa21.65■■□□□ 1.06
HLA-F-223ENST00000465459 NOS1P29475 1434 aa21.65■■□□□ 1.06
HLA-F-223ENST00000465459 SPATA31D1Q6ZQQ2 1576 aa21.65■■□□□ 1.06
HLA-F-223ENST00000465459 FBXO31Q5XUX0 539 aaPredicted RBP21.64■■□□□ 1.05
HLA-F-223ENST00000465459 PTPRTO14522 1441 aa21.63■■□□□ 1.05
HLA-F-223ENST00000465459 SETD1BQ9UPS6 1966 aaKnown RBP21.62■■□□□ 1.05
HLA-F-223ENST00000465459 PREX1Q8TCU6 1659 aa21.62■■□□□ 1.05
HLA-F-223ENST00000465459 TNRQ92752 1358 aa21.61■■□□□ 1.05
HLA-F-223ENST00000465459 DHX57Q6P158 1386 aaKnown RBP21.61■■□□□ 1.05
HLA-F-223ENST00000465459 SLC52A1Q9NWF4 448 aa21.6■■□□□ 1.05
HLA-F-223ENST00000465459 PLPPR3Q6T4P5 718 aa21.58■■□□□ 1.05
HLA-F-223ENST00000465459 CFAP65Q6ZU64 1925 aaKnown RBP21.58■■□□□ 1.04
HLA-F-223ENST00000465459 SPHKAPQ2M3C7 1700 aa21.57■■□□□ 1.04
HLA-F-223ENST00000465459 PLA2R1Q13018 1463 aa21.57■■□□□ 1.04
HLA-F-223ENST00000465459 NLRP1Q9C000 1473 aa21.57■■□□□ 1.04
HLA-F-223ENST00000465459 TRPM2O94759 1503 aa21.56■■□□□ 1.04
HLA-F-223ENST00000465459 FOXD1Q16676 465 aa21.56■■□□□ 1.04
HLA-F-223ENST00000465459 ANKRD30BQ9BXX2 1392 aa21.56■■□□□ 1.04
HLA-F-223ENST00000465459 SYNMO15061 1565 aa21.55■■□□□ 1.04
HLA-F-223ENST00000465459 PIK3C2BO00750 1634 aa21.51■■□□□ 1.03
HLA-F-223ENST00000465459 IDI1Q13907 227 aa21.51■■□□□ 1.03
HLA-F-223ENST00000465459 CCDC144AA2RUR9 1427 aa21.51■■□□□ 1.03
HLA-F-223ENST00000465459 UHRF1BP1Q6BDS2 1440 aa21.51■■□□□ 1.03
HLA-F-223ENST00000465459 CLSPNQ9HAW4 1339 aa21.5■■□□□ 1.03
HLA-F-223ENST00000465459 MYO3AQ8NEV4 1616 aa21.49■■□□□ 1.03
HLA-F-223ENST00000465459 A2ML1A8K2U0 1454 aa21.49■■□□□ 1.03
HLA-F-223ENST00000465459 KDM5AP29375 1690 aaKnown RBP21.46■■□□□ 1.03
HLA-F-223ENST00000465459 UGGT1Q9NYU2 1555 aa21.45■■□□□ 1.02
HLA-F-223ENST00000465459 CEP170BQ9Y4F5 1589 aaPredicted RBP21.45■■□□□ 1.02
HLA-F-223ENST00000465459 CLTCL1P53675 1640 aa21.45■■□□□ 1.02
HLA-F-223ENST00000465459 ZNF142P52746 1687 aaPredicted RBP21.45■■□□□ 1.02
HLA-F-223ENST00000465459 AEBP2Q6ZN18 517 aaPredicted RBP21.44■■□□□ 1.02
HLA-F-223ENST00000465459 THEMISQ8N1K5 641 aaPredicted RBP21.43■■□□□ 1.02
HLA-F-223ENST00000465459 CCER1Q8TC90 406 aaPredicted RBP21.43■■□□□ 1.02
HLA-F-223ENST00000465459 STAG3Q9UJ98 1225 aa21.43■■□□□ 1.02
HLA-F-223ENST00000465459 ADGRB3O60242 1522 aa21.42■■□□□ 1.02
HLA-F-223ENST00000465459 NEURL4Q96JN8 1562 aa21.42■■□□□ 1.02
HLA-F-223ENST00000465459 TMEM131LA2VDJ0 1609 aa21.4■■□□□ 1.02
HLA-F-223ENST00000465459 LMTK3Q96Q04 1460 aa21.39■■□□□ 1.02
HLA-F-223ENST00000465459 KIF1BO60333 1816 aa21.39■■□□□ 1.02
HLA-F-223ENST00000465459 UBR1Q8IWV7 1749 aa21.39■■□□□ 1.01
HLA-F-223ENST00000465459 CHGAP10645 457 aaKnown RBP21.38■■□□□ 1.01
HLA-F-223ENST00000465459 SPATA31E1Q6ZUB1 1445 aa21.38■■□□□ 1.01
HLA-F-223ENST00000465459 RPGRIP1LQ68CZ1 1315 aa21.36■■□□□ 1.01
HLA-F-223ENST00000465459 HDGFP51858 240 aaKnown RBP21.35■■□□□ 1.01
HLA-F-223ENST00000465459 TMEM2Q9UHN6 1383 aa21.35■■□□□ 1.01
HLA-F-223ENST00000465459 SIN3AQ96ST3 1273 aa21.34■■□□□ 1.01
HLA-F-223ENST00000465459 SLIT1O75093 1534 aa21.34■■□□□ 1.01
HLA-F-223ENST00000465459 ARHGAP23Q9P227 1491 aa21.33■■□□□ 1.01
HLA-F-223ENST00000465459 ZNF326Q5BKZ1 582 aaKnown RBP21.31■■□□□ 1
HLA-F-223ENST00000465459 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.31■■□□□ 1
HLA-F-223ENST00000465459 STAC3Q96MF2 364 aa21.31■■□□□ 1
HLA-F-223ENST00000465459 NEUROD1Q13562 356 aa21.3■■□□□ 1
HLA-F-223ENST00000465459 EID1Q9Y6B2 187 aa21.3■■□□□ 1
HLA-F-223ENST00000465459 ZFYVE9O95405 1425 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms