RNA–Protein interactions for RNA: ENST00000465421.5

SIK3-207, Transcript of SIK family kinase 3, humanhuman

TSL 2

Gene SIK3, Length 3,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-207ENST00000465421 TULP1O00294 542 aaPredicted RBP8.73□□□□□ -1.01
SIK3-207ENST00000465421 NPM2Q86SE8 214 aaKnown RBP8.73□□□□□ -1.01
SIK3-207ENST00000465421 HOMEZQ8IX15 550 aa8.73□□□□□ -1.01
SIK3-207ENST00000465421 MRS2Q9HD23 443 aa8.72□□□□□ -1.01
SIK3-207ENST00000465421 ARAP3Q8WWN8 1544 aa8.72□□□□□ -1.01
SIK3-207ENST00000465421 ARHGEF12Q9NZN5 1544 aa8.72□□□□□ -1.01
SIK3-207ENST00000465421 NUDCQ9Y266 331 aa8.71□□□□□ -1.01
SIK3-207ENST00000465421 TTC37Q6PGP7 1564 aa8.71□□□□□ -1.01
SIK3-207ENST00000465421 MAGI2Q86UL8 1455 aa8.71□□□□□ -1.02
SIK3-207ENST00000465421 EIF4G2P78344 907 aaKnown RBP eCLIP8.7□□□□□ -1.02
SIK3-207ENST00000465421 LAMC1P11047 1609 aa8.7□□□□□ -1.02
SIK3-207ENST00000465421 ZCCHC11Q5TAX3 1644 aaKnown RBP8.7□□□□□ -1.02
SIK3-207ENST00000465421 IQGAP3Q86VI3 1631 aa8.7□□□□□ -1.02
SIK3-207ENST00000465421 SPATA31E1Q6ZUB1 1445 aa8.7□□□□□ -1.02
SIK3-207ENST00000465421 NEFMP07197 916 aa8.7□□□□□ -1.02
SIK3-207ENST00000465421 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.69□□□□□ -1.02
SIK3-207ENST00000465421 UHRF1BP1Q6BDS2 1440 aa8.69□□□□□ -1.02
SIK3-207ENST00000465421 PODXL2Q9NZ53 605 aa8.69□□□□□ -1.02
SIK3-207ENST00000465421 KIAA1107Q9UPP5 1409 aa8.68□□□□□ -1.02
SIK3-207ENST00000465421 KDM5CP41229 1560 aa8.68□□□□□ -1.02
SIK3-207ENST00000465421 ERCC6L2Q5T890 1561 aa8.68□□□□□ -1.02
SIK3-207ENST00000465421 BRPF3Q9ULD4 1205 aa8.67□□□□□ -1.02
SIK3-207ENST00000465421 DHX29Q7Z478 1369 aaKnown RBP8.67□□□□□ -1.02
SIK3-207ENST00000465421 E9PCH4 1651 aa8.67□□□□□ -1.02
SIK3-207ENST00000465421 CCDC141Q6ZP82 1450 aa8.67□□□□□ -1.02
SIK3-207ENST00000465421 PPM1GO15355 546 aaPredicted RBP8.67□□□□□ -1.02
SIK3-207ENST00000465421 C9orf84Q5VXU9 1444 aa8.67□□□□□ -1.02
SIK3-207ENST00000465421 MPHOSPH9Q99550 1183 aa8.67□□□□□ -1.02
SIK3-207ENST00000465421 LAS1LQ9Y4W2 734 aaKnown RBP8.67□□□□□ -1.02
SIK3-207ENST00000465421 BACH2Q9BYV9 841 aa8.67□□□□□ -1.02
SIK3-207ENST00000465421 CHIC2Q9UKJ5 165 aa8.67□□□□□ -1.02
SIK3-207ENST00000465421 PLEKHH2Q8IVE3 1493 aa8.66□□□□□ -1.02
SIK3-207ENST00000465421 TCERG1O14776 1098 aaKnown RBP8.66□□□□□ -1.02
SIK3-207ENST00000465421 DEPDC5O75140 1603 aa8.66□□□□□ -1.02
SIK3-207ENST00000465421 ARID3CA6NKF2 412 aa8.66□□□□□ -1.02
SIK3-207ENST00000465421 ANKRD30AQ9BXX3 1397 aa8.66□□□□□ -1.02
SIK3-207ENST00000465421 KIF7Q2M1P5 1343 aa8.66□□□□□ -1.02
SIK3-207ENST00000465421 PDE4AP27815 886 aa8.66□□□□□ -1.02
SIK3-207ENST00000465421 GSE1Q14687 1217 aa8.65□□□□□ -1.02
SIK3-207ENST00000465421 ABCA9Q8IUA7 1624 aa8.65□□□□□ -1.03
SIK3-207ENST00000465421 ABCC1P33527 1531 aa8.65□□□□□ -1.03
SIK3-207ENST00000465421 MS4A1P11836 297 aa8.64□□□□□ -1.03
SIK3-207ENST00000465421 RALGAPBQ86X10 1494 aa8.64□□□□□ -1.03
SIK3-207ENST00000465421 NEURL4Q96JN8 1562 aa8.64□□□□□ -1.03
SIK3-207ENST00000465421 ATP10AO60312 1499 aa8.64□□□□□ -1.03
SIK3-207ENST00000465421 RIMBP3CA6NJZ7 1639 aa8.64□□□□□ -1.03
SIK3-207ENST00000465421 RIMBP3BA6NNM3 1639 aa8.64□□□□□ -1.03
SIK3-207ENST00000465421 RIMBP3Q9UFD9 1639 aa8.64□□□□□ -1.03
SIK3-207ENST00000465421 ZNF644Q9H582 1327 aaPredicted RBP8.64□□□□□ -1.03
SIK3-207ENST00000465421 BCORL1Q5H9F3 1711 aa8.63□□□□□ -1.03
SIK3-207ENST00000465421 ANKRD50Q9ULJ7 1429 aa8.63□□□□□ -1.03
SIK3-207ENST00000465421 TRPM1Q7Z4N2 1603 aa8.63□□□□□ -1.03
SIK3-207ENST00000465421 RRP7BPQ9NSQ0 103 aa8.63□□□□□ -1.03
SIK3-207ENST00000465421 FOXD1Q16676 465 aa8.63□□□□□ -1.03
SIK3-207ENST00000465421 RNF17Q9BXT8 1623 aaKnown RBP8.63□□□□□ -1.03
SIK3-207ENST00000465421 ZNF326Q5BKZ1 582 aaKnown RBP8.63□□□□□ -1.03
SIK3-207ENST00000465421 SYCP2Q9BX26 1530 aa8.62□□□□□ -1.03
SIK3-207ENST00000465421 L3MBTL2Q969R5 705 aa8.62□□□□□ -1.03
SIK3-207ENST00000465421 TAOK2Q9UL54 1235 aa8.62□□□□□ -1.03
SIK3-207ENST00000465421 FAM135AQ9P2D6 1515 aa8.62□□□□□ -1.03
SIK3-207ENST00000465421 DUOX2Q9NRD8 1548 aa8.62□□□□□ -1.03
SIK3-207ENST00000465421 INO80Q9ULG1 1556 aaPredicted RBP8.61□□□□□ -1.03
SIK3-207ENST00000465421 EIF2AK4Q9P2K8 1649 aaKnown RBP8.61□□□□□ -1.03
SIK3-207ENST00000465421 NBPF8Q3BBV2 869 aa8.61□□□□□ -1.03
SIK3-207ENST00000465421 LRPPRCP42704 1394 aaKnown RBP8.61□□□□□ -1.03
SIK3-207ENST00000465421 CFDP1Q9UEE9 299 aaPredicted RBP8.61□□□□□ -1.03
SIK3-207ENST00000465421 VWDEQ8N2E2 1590 aa8.6□□□□□ -1.03
SIK3-207ENST00000465421 WDR7Q9Y4E6 1490 aa8.6□□□□□ -1.03
SIK3-207ENST00000465421 ERBINQ96RT1 1412 aa8.6□□□□□ -1.03
SIK3-207ENST00000465421 RRP1P56182 461 aaKnown RBP8.6□□□□□ -1.03
SIK3-207ENST00000465421 PNISRQ8TF01 805 aaKnown RBP8.6□□□□□ -1.03
SIK3-207ENST00000465421 NFKBIBQ15653 356 aa8.6□□□□□ -1.03
SIK3-207ENST00000465421 RSPH4AQ5TD94 716 aa8.6□□□□□ -1.03
SIK3-207ENST00000465421 FRAT1Q92837 279 aaPredicted RBP8.6□□□□□ -1.03
SIK3-207ENST00000465421 EXOC6Q8TAG9 804 aa8.6□□□□□ -1.03
SIK3-207ENST00000465421 RSPH6AQ9H0K4 717 aa8.6□□□□□ -1.03
SIK3-207ENST00000465421 CEP152O94986 1710 aa8.59□□□□□ -1.03
SIK3-207ENST00000465421 PLEKHD1A6NEE1 506 aa8.59□□□□□ -1.03
SIK3-207ENST00000465421 FAM43AQ8N2R8 423 aa8.59□□□□□ -1.04
SIK3-207ENST00000465421 PLCH2O75038 1416 aa8.58□□□□□ -1.04
SIK3-207ENST00000465421 DDRGK1Q96HY6 314 aa8.58□□□□□ -1.04
SIK3-207ENST00000465421 ZFYVE16Q7Z3T8 1539 aa8.58□□□□□ -1.04
SIK3-207ENST00000465421 CFAP74Q9C0B2 1584 aa8.58□□□□□ -1.04
SIK3-207ENST00000465421 ARHGAP5Q13017 1502 aa8.58□□□□□ -1.04
SIK3-207ENST00000465421 ARID4BQ4LE39 1312 aaPredicted RBP8.57□□□□□ -1.04
SIK3-207ENST00000465421 RTEL1-TNFRSF6BF6WH68 1400 aa8.57□□□□□ -1.04
SIK3-207ENST00000465421 PKNOX2Q96KN3 472 aa8.57□□□□□ -1.04
SIK3-207ENST00000465421 PDIA4P13667 645 aaKnown RBP8.57□□□□□ -1.04
SIK3-207ENST00000465421 KIF15Q9NS87 1388 aa8.57□□□□□ -1.04
SIK3-207ENST00000465421 SPHKAPQ2M3C7 1700 aa8.56□□□□□ -1.04
SIK3-207ENST00000465421 KIAA1210Q9ULL0 1709 aa8.56□□□□□ -1.04
SIK3-207ENST00000465421 GLI2P10070 1586 aa8.56□□□□□ -1.04
SIK3-207ENST00000465421 PRDM15P57071 1507 aaPredicted RBP8.56□□□□□ -1.04
SIK3-207ENST00000465421 TET3O43151 1660 aa8.56□□□□□ -1.04
SIK3-207ENST00000465421 DCAF11Q8TEB1 546 aa8.55□□□□□ -1.04
SIK3-207ENST00000465421 IFT172Q9UG01 1749 aa8.55□□□□□ -1.04
SIK3-207ENST00000465421 PLA2R1Q13018 1463 aa8.55□□□□□ -1.04
SIK3-207ENST00000465421 IQGAP1P46940 1657 aa8.55□□□□□ -1.04
SIK3-207ENST00000465421 MROH1Q8NDA8 1641 aa8.54□□□□□ -1.04
SIK3-207ENST00000465421 SKAP1Q86WV1 359 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms