RNA–Protein interactions for RNA: ENST00000465320.1

CYTH3-204, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-204ENST00000465320 SHANK2Q9UPX8 1470 aa23.05■■□□□ 1.28
CYTH3-204ENST00000465320 TIAM1Q13009 1591 aa23.05■■□□□ 1.28
CYTH3-204ENST00000465320 SCAF1Q9H7N4 1312 aaKnown RBP23.05■■□□□ 1.28
CYTH3-204ENST00000465320 ALKQ9UM73 1620 aa23.04■■□□□ 1.28
CYTH3-204ENST00000465320 RTEL1-TNFRSF6BF6WH68 1400 aa23.03■■□□□ 1.28
CYTH3-204ENST00000465320 CPS1P31327 1500 aa23.03■■□□□ 1.28
CYTH3-204ENST00000465320 MTUS2Q5JR59 1369 aa23.02■■□□□ 1.28
CYTH3-204ENST00000465320 TNRQ92752 1358 aa23.02■■□□□ 1.28
CYTH3-204ENST00000465320 TOM1O60784 492 aa23.02■■□□□ 1.28
CYTH3-204ENST00000465320 VWDEQ8N2E2 1590 aa23.01■■□□□ 1.27
CYTH3-204ENST00000465320 KIF3BO15066 747 aa23■■□□□ 1.27
CYTH3-204ENST00000465320 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23■■□□□ 1.27
CYTH3-204ENST00000465320 PZPP20742 1482 aa22.99■■□□□ 1.27
CYTH3-204ENST00000465320 ANKLE2Q86XL3 938 aa22.97■■□□□ 1.27
CYTH3-204ENST00000465320 STRCP1A6NGW2 1772 aa22.95■■□□□ 1.26
CYTH3-204ENST00000465320 MIA2Q96PC5 1412 aa22.95■■□□□ 1.26
CYTH3-204ENST00000465320 KDM5DQ9BY66 1539 aa22.94■■□□□ 1.26
CYTH3-204ENST00000465320 MED14O60244 1454 aa22.93■■□□□ 1.26
CYTH3-204ENST00000465320 WASHC2CQ9Y4E1 1318 aa22.93■■□□□ 1.26
CYTH3-204ENST00000465320 CEP162Q5TB80 1403 aa22.92■■□□□ 1.26
CYTH3-204ENST00000465320 THEMISQ8N1K5 641 aaPredicted RBP22.92■■□□□ 1.26
CYTH3-204ENST00000465320 NPHP4O75161 1426 aaPredicted RBP22.91■■□□□ 1.26
CYTH3-204ENST00000465320 DEPDC5O75140 1603 aa22.91■■□□□ 1.26
CYTH3-204ENST00000465320 EHBP1L1Q8N3D4 1523 aa22.91■■□□□ 1.26
CYTH3-204ENST00000465320 UGGT1Q9NYU2 1555 aa22.9■■□□□ 1.26
CYTH3-204ENST00000465320 FAM135AQ9P2D6 1515 aa22.89■■□□□ 1.26
CYTH3-204ENST00000465320 CCDC141Q6ZP82 1450 aa22.89■■□□□ 1.25
CYTH3-204ENST00000465320 NLRP1Q9C000 1473 aa22.89■■□□□ 1.25
CYTH3-204ENST00000465320 IQGAP1P46940 1657 aa22.87■■□□□ 1.25
CYTH3-204ENST00000465320 CAMSAP2Q08AD1 1489 aa22.86■■□□□ 1.25
CYTH3-204ENST00000465320 LRRC7Q96NW7 1537 aa22.85■■□□□ 1.25
CYTH3-204ENST00000465320 SENP3Q9H4L4 574 aaPredicted RBP22.84■■□□□ 1.25
CYTH3-204ENST00000465320 RSPH4AQ5TD94 716 aa22.83■■□□□ 1.25
CYTH3-204ENST00000465320 NCOA2Q15596 1464 aa22.83■■□□□ 1.25
CYTH3-204ENST00000465320 CFAP65Q6ZU64 1925 aaKnown RBP22.82■■□□□ 1.24
CYTH3-204ENST00000465320 PHF23Q9BUL5 403 aaPredicted RBP22.82■■□□□ 1.24
CYTH3-204ENST00000465320 RGS17Q9UGC6 210 aaPredicted RBP22.8■■□□□ 1.24
CYTH3-204ENST00000465320 ZC3H13Q5T200 1668 aaKnown RBP22.79■■□□□ 1.24
CYTH3-204ENST00000465320 ARHGEF5Q12774 1597 aa22.79■■□□□ 1.24
CYTH3-204ENST00000465320 RNF17Q9BXT8 1623 aaKnown RBP22.79■■□□□ 1.24
CYTH3-204ENST00000465320 ABCC3O15438 1527 aa22.78■■□□□ 1.24
CYTH3-204ENST00000465320 XIRP1Q702N8 1843 aaKnown RBP22.75■■□□□ 1.23
CYTH3-204ENST00000465320 ERVK-7P63135 1459 aa22.75■■□□□ 1.23
CYTH3-204ENST00000465320 TSPY4P0CV99 314 aa22.75■■□□□ 1.23
CYTH3-204ENST00000465320 TSPY10P0CW01 314 aa22.75■■□□□ 1.23
CYTH3-204ENST00000465320 MROH1Q8NDA8 1641 aa22.74■■□□□ 1.23
CYTH3-204ENST00000465320 UBR1Q8IWV7 1749 aa22.74■■□□□ 1.23
CYTH3-204ENST00000465320 SYNMO15061 1565 aa22.73■■□□□ 1.23
CYTH3-204ENST00000465320 LTKP29376 864 aa22.73■■□□□ 1.23
CYTH3-204ENST00000465320 CEP152O94986 1710 aa22.71■■□□□ 1.23
CYTH3-204ENST00000465320 MAST1Q9Y2H9 1570 aa22.69■■□□□ 1.22
CYTH3-204ENST00000465320 SCAF11Q99590 1463 aaKnown RBP22.67■■□□□ 1.22
CYTH3-204ENST00000465320 ARHGAP23Q9P227 1491 aa22.67■■□□□ 1.22
CYTH3-204ENST00000465320 EIF2AK4Q9P2K8 1649 aaKnown RBP22.66■■□□□ 1.22
CYTH3-204ENST00000465320 TXNDC2Q86VQ3 553 aa22.65■■□□□ 1.22
CYTH3-204ENST00000465320 SLIT1O75093 1534 aa22.65■■□□□ 1.22
CYTH3-204ENST00000465320 POTEAQ6S8J7 498 aa22.61■■□□□ 1.21
CYTH3-204ENST00000465320 LRRC9Q6ZRR7 1453 aa22.6■■□□□ 1.21
CYTH3-204ENST00000465320 KANK4Q5T7N3 995 aaPredicted RBP22.59■■□□□ 1.21
CYTH3-204ENST00000465320 FAM135BQ49AJ0 1406 aa22.58■■□□□ 1.21
CYTH3-204ENST00000465320 ARHGAP31Q2M1Z3 1444 aa22.57■■□□□ 1.2
CYTH3-204ENST00000465320 PIK3C2BO00750 1634 aa22.57■■□□□ 1.2
CYTH3-204ENST00000465320 DUOX2Q9NRD8 1548 aa22.56■■□□□ 1.2
CYTH3-204ENST00000465320 TMEM2Q9UHN6 1383 aa22.53■■□□□ 1.2
CYTH3-204ENST00000465320 RBM33Q96EV2 1170 aaKnown RBP22.53■■□□□ 1.2
CYTH3-204ENST00000465320 EID1Q9Y6B2 187 aa22.53■■□□□ 1.2
CYTH3-204ENST00000465320 PRDM15P57071 1507 aaPredicted RBP22.52■■□□□ 1.2
CYTH3-204ENST00000465320 TMEM94Q12767 1356 aa22.52■■□□□ 1.2
CYTH3-204ENST00000465320 MYOM3Q5VTT5 1437 aa22.5■■□□□ 1.19
CYTH3-204ENST00000465320 TET3O43151 1660 aa22.5■■□□□ 1.19
CYTH3-204ENST00000465320 ROBO1Q9Y6N7 1651 aa22.5■■□□□ 1.19
CYTH3-204ENST00000465320 IDI1Q13907 227 aa22.5■■□□□ 1.19
CYTH3-204ENST00000465320 MAP3K1Q13233 1512 aa22.5■■□□□ 1.19
CYTH3-204ENST00000465320 KCNA6P17658 529 aa22.49■■□□□ 1.19
CYTH3-204ENST00000465320 RRP7BPQ9NSQ0 103 aa22.49■■□□□ 1.19
CYTH3-204ENST00000465320 KIF15Q9NS87 1388 aa22.49■■□□□ 1.19
CYTH3-204ENST00000465320 SLC26A8Q96RN1 970 aa22.48■■□□□ 1.19
CYTH3-204ENST00000465320 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.48■■□□□ 1.19
CYTH3-204ENST00000465320 ABCC5O15440 1437 aa22.48■■□□□ 1.19
CYTH3-204ENST00000465320 VPS8Q8N3P4 1428 aa22.48■■□□□ 1.19
CYTH3-204ENST00000465320 PROSER2Q86WR7 435 aaPredicted RBP22.46■■□□□ 1.19
CYTH3-204ENST00000465320 KDM5AP29375 1690 aaKnown RBP22.46■■□□□ 1.19
CYTH3-204ENST00000465320 ERBINQ96RT1 1412 aa22.45■■□□□ 1.18
CYTH3-204ENST00000465320 CROCC2H7BZ55 1655 aa22.44■■□□□ 1.18
CYTH3-204ENST00000465320 EFCAB6Q5THR3 1501 aa22.44■■□□□ 1.18
CYTH3-204ENST00000465320 STAG3Q9UJ98 1225 aa22.43■■□□□ 1.18
CYTH3-204ENST00000465320 SETD1AO15047 1707 aaKnown RBP22.42■■□□□ 1.18
CYTH3-204ENST00000465320 LOC105371045A0A1W2PR82 267 aa22.4■■□□□ 1.18
CYTH3-204ENST00000465320 NWD1Q149M9 1564 aa22.39■■□□□ 1.18
CYTH3-204ENST00000465320 LMTK2Q8IWU2 1503 aa22.39■■□□□ 1.17
CYTH3-204ENST00000465320 NOS1P29475 1434 aa22.38■■□□□ 1.17
CYTH3-204ENST00000465320 SLAIN2Q9P270 581 aa22.37■■□□□ 1.17
CYTH3-204ENST00000465320 PTPN23Q9H3S7 1636 aa22.37■■□□□ 1.17
CYTH3-204ENST00000465320 PHLPP1O60346 1717 aa22.37■■□□□ 1.17
CYTH3-204ENST00000465320 DAPK1P53355 1430 aa22.36■■□□□ 1.17
CYTH3-204ENST00000465320 NKTRP30414 1462 aaKnown RBP22.35■■□□□ 1.17
CYTH3-204ENST00000465320 KANK1Q14678 1352 aa22.35■■□□□ 1.17
CYTH3-204ENST00000465320 CHD2O14647 1828 aaKnown RBP22.34■■□□□ 1.17
CYTH3-204ENST00000465320 CHIC2Q9UKJ5 165 aa22.34■■□□□ 1.17
CYTH3-204ENST00000465320 MYO5BQ9ULV0 1848 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms