RNA–Protein interactions for RNA: ENST00000465298.1

ERGIC3-212, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-212ENST00000465298 ADAMTSL3P82987 1691 aa19.81■□□□□ 0.76
ERGIC3-212ENST00000465298 WASHC2CQ9Y4E1 1318 aa19.79■□□□□ 0.76
ERGIC3-212ENST00000465298 PTPRMP28827 1452 aa19.75■□□□□ 0.75
ERGIC3-212ENST00000465298 HFM1A2PYH4 1435 aa19.75■□□□□ 0.75
ERGIC3-212ENST00000465298 MADDQ8WXG6 1647 aa19.74■□□□□ 0.75
ERGIC3-212ENST00000465298 SIGLEC1Q9BZZ2 1709 aa19.73■□□□□ 0.75
ERGIC3-212ENST00000465298 RNF17Q9BXT8 1623 aaKnown RBP19.73■□□□□ 0.75
ERGIC3-212ENST00000465298 FER1L4A9Z1Z3 1794 aa19.72■□□□□ 0.75
ERGIC3-212ENST00000465298 KDM5DQ9BY66 1539 aa19.72■□□□□ 0.75
ERGIC3-212ENST00000465298 ZMYM3Q14202 1370 aa19.71■□□□□ 0.75
ERGIC3-212ENST00000465298 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.7■□□□□ 0.74
ERGIC3-212ENST00000465298 NAIPQ13075 1403 aa19.69■□□□□ 0.74
ERGIC3-212ENST00000465298 PRDM15P57071 1507 aaPredicted RBP19.69■□□□□ 0.74
ERGIC3-212ENST00000465298 MROH2AA6NES4 1674 aa19.68■□□□□ 0.74
ERGIC3-212ENST00000465298 ZC3H13Q5T200 1668 aaKnown RBP19.68■□□□□ 0.74
ERGIC3-212ENST00000465298 RIMS1Q86UR5 1692 aaKnown RBP19.68■□□□□ 0.74
ERGIC3-212ENST00000465298 NPATQ14207 1427 aa19.68■□□□□ 0.74
ERGIC3-212ENST00000465298 DEPDC5O75140 1603 aa19.66■□□□□ 0.74
ERGIC3-212ENST00000465298 TRIM26Q12899 539 aaPredicted RBP19.65■□□□□ 0.74
ERGIC3-212ENST00000465298 HRCP23327 699 aa19.64■□□□□ 0.73
ERGIC3-212ENST00000465298 NUP155O75694 1391 aa19.64■□□□□ 0.73
ERGIC3-212ENST00000465298 ARHGAP31Q2M1Z3 1444 aa19.64■□□□□ 0.73
ERGIC3-212ENST00000465298 ABCC3O15438 1527 aa19.63■□□□□ 0.73
ERGIC3-212ENST00000465298 LMTK2Q8IWU2 1503 aa19.63■□□□□ 0.73
ERGIC3-212ENST00000465298 SETD5Q9C0A6 1442 aa19.63■□□□□ 0.73
ERGIC3-212ENST00000465298 GCC2Q8IWJ2 1684 aa19.62■□□□□ 0.73
ERGIC3-212ENST00000465298 PZPP20742 1482 aa19.62■□□□□ 0.73
ERGIC3-212ENST00000465298 CLTCQ00610 1675 aaKnown RBP19.61■□□□□ 0.73
ERGIC3-212ENST00000465298 MROH1Q8NDA8 1641 aa19.61■□□□□ 0.73
ERGIC3-212ENST00000465298 CEBPAP49715 358 aaPredicted RBP19.6■□□□□ 0.73
ERGIC3-212ENST00000465298 SETD1BQ9UPS6 1966 aaKnown RBP19.6■□□□□ 0.73
ERGIC3-212ENST00000465298 UNC13BO14795 1591 aa19.6■□□□□ 0.73
ERGIC3-212ENST00000465298 VWDEQ8N2E2 1590 aa19.59■□□□□ 0.73
ERGIC3-212ENST00000465298 PLPPR3Q6T4P5 718 aa19.59■□□□□ 0.73
ERGIC3-212ENST00000465298 TRIM52Q96A61 297 aa19.59■□□□□ 0.73
ERGIC3-212ENST00000465298 RPRD2Q5VT52 1461 aaKnown RBP19.59■□□□□ 0.73
ERGIC3-212ENST00000465298 UHRF1BP1Q6BDS2 1440 aa19.57■□□□□ 0.72
ERGIC3-212ENST00000465298 C3P01024 1663 aa19.56■□□□□ 0.72
ERGIC3-212ENST00000465298 TNRQ92752 1358 aa19.55■□□□□ 0.72
ERGIC3-212ENST00000465298 CAMSAP1Q5T5Y3 1602 aa19.53■□□□□ 0.72
ERGIC3-212ENST00000465298 IQGAP3Q86VI3 1631 aa19.53■□□□□ 0.72
ERGIC3-212ENST00000465298 SLC4A1APQ9BWU0 796 aaKnown RBP19.52■□□□□ 0.72
ERGIC3-212ENST00000465298 SLC52A1Q9NWF4 448 aa19.52■□□□□ 0.72
ERGIC3-212ENST00000465298 NLRP1Q9C000 1473 aa19.52■□□□□ 0.72
ERGIC3-212ENST00000465298 TET3O43151 1660 aa19.52■□□□□ 0.71
ERGIC3-212ENST00000465298 EFCAB6Q5THR3 1501 aa19.51■□□□□ 0.71
ERGIC3-212ENST00000465298 RAB3GAP2Q9H2M9 1393 aa19.51■□□□□ 0.71
ERGIC3-212ENST00000465298 FBXO31Q5XUX0 539 aaPredicted RBP19.5■□□□□ 0.71
ERGIC3-212ENST00000465298 ERVK-7P63135 1459 aa19.49■□□□□ 0.71
ERGIC3-212ENST00000465298 CEP152O94986 1710 aa19.49■□□□□ 0.71
ERGIC3-212ENST00000465298 SPATA31D1Q6ZQQ2 1576 aa19.49■□□□□ 0.71
ERGIC3-212ENST00000465298 PREX1Q8TCU6 1659 aa19.47■□□□□ 0.71
ERGIC3-212ENST00000465298 THEMISQ8N1K5 641 aaPredicted RBP19.46■□□□□ 0.71
ERGIC3-212ENST00000465298 NOS1P29475 1434 aa19.45■□□□□ 0.7
ERGIC3-212ENST00000465298 A2ML1A8K2U0 1454 aa19.44■□□□□ 0.7
ERGIC3-212ENST00000465298 PKD2Q13563 968 aa19.44■□□□□ 0.7
ERGIC3-212ENST00000465298 MPHOSPH9Q99550 1183 aa19.44■□□□□ 0.7
ERGIC3-212ENST00000465298 STAG3Q9UJ98 1225 aa19.44■□□□□ 0.7
ERGIC3-212ENST00000465298 LMTK3Q96Q04 1460 aa19.42■□□□□ 0.7
ERGIC3-212ENST00000465298 HDGFP51858 240 aaKnown RBP19.41■□□□□ 0.7
ERGIC3-212ENST00000465298 DMRT2Q9Y5R5 561 aa19.41■□□□□ 0.7
ERGIC3-212ENST00000465298 PTPRTO14522 1441 aa19.39■□□□□ 0.69
ERGIC3-212ENST00000465298 CEP170BQ9Y4F5 1589 aaPredicted RBP19.39■□□□□ 0.69
ERGIC3-212ENST00000465298 MYO3AQ8NEV4 1616 aa19.39■□□□□ 0.69
ERGIC3-212ENST00000465298 UGGT1Q9NYU2 1555 aa19.37■□□□□ 0.69
ERGIC3-212ENST00000465298 IDI1Q13907 227 aa19.37■□□□□ 0.69
ERGIC3-212ENST00000465298 E9PCH4 1651 aa19.36■□□□□ 0.69
ERGIC3-212ENST00000465298 ZNF142P52746 1687 aaPredicted RBP19.36■□□□□ 0.69
ERGIC3-212ENST00000465298 PLA2R1Q13018 1463 aa19.36■□□□□ 0.69
ERGIC3-212ENST00000465298 ANKLE2Q86XL3 938 aa19.35■□□□□ 0.69
ERGIC3-212ENST00000465298 EID1Q9Y6B2 187 aa19.34■□□□□ 0.69
ERGIC3-212ENST00000465298 KDM5AP29375 1690 aaKnown RBP19.33■□□□□ 0.68
ERGIC3-212ENST00000465298 HSPA2P54652 639 aa19.32■□□□□ 0.68
ERGIC3-212ENST00000465298 TRPM2O94759 1503 aa19.31■□□□□ 0.68
ERGIC3-212ENST00000465298 CCDC144AA2RUR9 1427 aa19.31■□□□□ 0.68
ERGIC3-212ENST00000465298 SYNMO15061 1565 aa19.31■□□□□ 0.68
ERGIC3-212ENST00000465298 CFAP65Q6ZU64 1925 aaKnown RBP19.31■□□□□ 0.68
ERGIC3-212ENST00000465298 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.3■□□□□ 0.68
ERGIC3-212ENST00000465298 CHGAP10645 457 aaKnown RBP19.29■□□□□ 0.68
ERGIC3-212ENST00000465298 SPHKAPQ2M3C7 1700 aa19.28■□□□□ 0.68
ERGIC3-212ENST00000465298 TMEM2Q9UHN6 1383 aa19.28■□□□□ 0.68
ERGIC3-212ENST00000465298 ADGRB3O60242 1522 aa19.27■□□□□ 0.68
ERGIC3-212ENST00000465298 PCGF6Q9BYE7 350 aa19.27■□□□□ 0.68
ERGIC3-212ENST00000465298 PIK3C2BO00750 1634 aa19.26■□□□□ 0.67
ERGIC3-212ENST00000465298 RPGRIP1LQ68CZ1 1315 aa19.25■□□□□ 0.67
ERGIC3-212ENST00000465298 SLIT1O75093 1534 aa19.25■□□□□ 0.67
ERGIC3-212ENST00000465298 TXNDC2Q86VQ3 553 aa19.24■□□□□ 0.67
ERGIC3-212ENST00000465298 FOXD1Q16676 465 aa19.23■□□□□ 0.67
ERGIC3-212ENST00000465298 ZNF326Q5BKZ1 582 aaKnown RBP19.23■□□□□ 0.67
ERGIC3-212ENST00000465298 UBR1Q8IWV7 1749 aa19.22■□□□□ 0.67
ERGIC3-212ENST00000465298 ARHGAP23Q9P227 1491 aa19.22■□□□□ 0.67
ERGIC3-212ENST00000465298 PPP1R15AO75807 674 aaPredicted RBP19.22■□□□□ 0.67
ERGIC3-212ENST00000465298 STAC3Q96MF2 364 aa19.22■□□□□ 0.67
ERGIC3-212ENST00000465298 ANKRD30BQ9BXX2 1392 aa19.21■□□□□ 0.67
ERGIC3-212ENST00000465298 SCAF11Q99590 1463 aaKnown RBP19.21■□□□□ 0.67
ERGIC3-212ENST00000465298 MED14O60244 1454 aa19.2■□□□□ 0.66
ERGIC3-212ENST00000465298 TMEM131LA2VDJ0 1609 aa19.19■□□□□ 0.66
ERGIC3-212ENST00000465298 VGFO15240 615 aaPredicted RBP19.19■□□□□ 0.66
ERGIC3-212ENST00000465298 NCKAP5LQ9HCH0 1330 aa19.19■□□□□ 0.66
ERGIC3-212ENST00000465298 NEURL4Q96JN8 1562 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 165.4 ms