RNA–Protein interactions for RNA: ENST00000465245.1

TRA2B-208, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-208ENST00000465245 SCAF1Q9H7N4 1312 aaKnown RBP19.52■□□□□ 0.72
TRA2B-208ENST00000465245 RTEL1-TNFRSF6BF6WH68 1400 aa19.51■□□□□ 0.71
TRA2B-208ENST00000465245 KDM5DQ9BY66 1539 aa19.51■□□□□ 0.71
TRA2B-208ENST00000465245 TNRQ92752 1358 aa19.51■□□□□ 0.71
TRA2B-208ENST00000465245 FAM135AQ9P2D6 1515 aa19.51■□□□□ 0.71
TRA2B-208ENST00000465245 DHX29Q7Z478 1369 aaKnown RBP19.5■□□□□ 0.71
TRA2B-208ENST00000465245 PZPP20742 1482 aa19.49■□□□□ 0.71
TRA2B-208ENST00000465245 SHANK2Q9UPX8 1470 aa19.49■□□□□ 0.71
TRA2B-208ENST00000465245 PIP4K2BP78356 416 aa19.49■□□□□ 0.71
TRA2B-208ENST00000465245 HSPA1LP34931 641 aa19.48■□□□□ 0.71
TRA2B-208ENST00000465245 TOM1O60784 492 aa19.47■□□□□ 0.71
TRA2B-208ENST00000465245 CEP162Q5TB80 1403 aa19.46■□□□□ 0.71
TRA2B-208ENST00000465245 KIF3BO15066 747 aa19.46■□□□□ 0.71
TRA2B-208ENST00000465245 FBXO31Q5XUX0 539 aaPredicted RBP19.46■□□□□ 0.71
TRA2B-208ENST00000465245 CCDC141Q6ZP82 1450 aa19.46■□□□□ 0.71
TRA2B-208ENST00000465245 VWDEQ8N2E2 1590 aa19.44■□□□□ 0.7
TRA2B-208ENST00000465245 DEPDC5O75140 1603 aa19.44■□□□□ 0.7
TRA2B-208ENST00000465245 CAMSAP2Q08AD1 1489 aa19.44■□□□□ 0.7
TRA2B-208ENST00000465245 UGGT1Q9NYU2 1555 aa19.43■□□□□ 0.7
TRA2B-208ENST00000465245 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.43■□□□□ 0.75e-7■□□□□ 8.4
TRA2B-208ENST00000465245 NLRP1Q9C000 1473 aa19.42■□□□□ 0.7
TRA2B-208ENST00000465245 WASHC2CQ9Y4E1 1318 aa19.42■□□□□ 0.7
TRA2B-208ENST00000465245 IQGAP1P46940 1657 aa19.42■□□□□ 0.7
TRA2B-208ENST00000465245 ANKLE2Q86XL3 938 aa19.41■□□□□ 0.7
TRA2B-208ENST00000465245 NPHP4O75161 1426 aaPredicted RBP19.4■□□□□ 0.7
TRA2B-208ENST00000465245 MIA2Q96PC5 1412 aa19.4■□□□□ 0.7
TRA2B-208ENST00000465245 MED14O60244 1454 aa19.4■□□□□ 0.7
TRA2B-208ENST00000465245 THEMISQ8N1K5 641 aaPredicted RBP19.39■□□□□ 0.69
TRA2B-208ENST00000465245 ALKQ9UM73 1620 aa19.39■□□□□ 0.69
TRA2B-208ENST00000465245 NCOA2Q15596 1464 aa19.38■□□□□ 0.69
TRA2B-208ENST00000465245 STRCP1A6NGW2 1772 aa19.37■□□□□ 0.69
TRA2B-208ENST00000465245 ZC3H13Q5T200 1668 aaKnown RBP19.37■□□□□ 0.69
TRA2B-208ENST00000465245 ARHGEF5Q12774 1597 aa19.37■□□□□ 0.69
TRA2B-208ENST00000465245 RNF17Q9BXT8 1623 aaKnown RBP19.36■□□□□ 0.69
TRA2B-208ENST00000465245 SYNMO15061 1565 aa19.36■□□□□ 0.69
TRA2B-208ENST00000465245 RSPH4AQ5TD94 716 aa19.35■□□□□ 0.69
TRA2B-208ENST00000465245 PHF23Q9BUL5 403 aaPredicted RBP19.35■□□□□ 0.69
TRA2B-208ENST00000465245 ABCC3O15438 1527 aa19.32■□□□□ 0.68
TRA2B-208ENST00000465245 CFAP65Q6ZU64 1925 aaKnown RBP19.31■□□□□ 0.68
TRA2B-208ENST00000465245 EIF2AK4Q9P2K8 1649 aaKnown RBP19.31■□□□□ 0.68
TRA2B-208ENST00000465245 CEP152O94986 1710 aa19.31■□□□□ 0.68
TRA2B-208ENST00000465245 LRRC7Q96NW7 1537 aa19.3■□□□□ 0.68
TRA2B-208ENST00000465245 TSPY4P0CV99 314 aa19.3■□□□□ 0.68
TRA2B-208ENST00000465245 TSPY10P0CW01 314 aa19.3■□□□□ 0.68
TRA2B-208ENST00000465245 UBR1Q8IWV7 1749 aa19.29■□□□□ 0.68
TRA2B-208ENST00000465245 MAST1Q9Y2H9 1570 aa19.29■□□□□ 0.68
TRA2B-208ENST00000465245 ERVK-7P63135 1459 aa19.28■□□□□ 0.68
TRA2B-208ENST00000465245 SENP3Q9H4L4 574 aaPredicted RBP19.28■□□□□ 0.68
TRA2B-208ENST00000465245 MROH1Q8NDA8 1641 aa19.26■□□□□ 0.67
TRA2B-208ENST00000465245 XIRP1Q702N8 1843 aaKnown RBP19.23■□□□□ 0.67
TRA2B-208ENST00000465245 SCAF11Q99590 1463 aaKnown RBP19.22■□□□□ 0.67
TRA2B-208ENST00000465245 LRRC9Q6ZRR7 1453 aa19.19■□□□□ 0.66
TRA2B-208ENST00000465245 SLIT1O75093 1534 aa19.18■□□□□ 0.66
TRA2B-208ENST00000465245 DUOX2Q9NRD8 1548 aa19.18■□□□□ 0.66
TRA2B-208ENST00000465245 ARHGAP23Q9P227 1491 aa19.17■□□□□ 0.66
TRA2B-208ENST00000465245 PRDM15P57071 1507 aaPredicted RBP19.16■□□□□ 0.66
TRA2B-208ENST00000465245 PIK3C2BO00750 1634 aa19.14■□□□□ 0.66
TRA2B-208ENST00000465245 CROCC2H7BZ55 1655 aa19.14■□□□□ 0.66
TRA2B-208ENST00000465245 LTKP29376 864 aa19.13■□□□□ 0.65
TRA2B-208ENST00000465245 TXNDC2Q86VQ3 553 aa19.13■□□□□ 0.65
TRA2B-208ENST00000465245 MYOM3Q5VTT5 1437 aa19.13■□□□□ 0.65
TRA2B-208ENST00000465245 ARHGAP31Q2M1Z3 1444 aa19.12■□□□□ 0.65
TRA2B-208ENST00000465245 VPS8Q8N3P4 1428 aa19.12■□□□□ 0.65
TRA2B-208ENST00000465245 EID1Q9Y6B2 187 aa19.11■□□□□ 0.65
TRA2B-208ENST00000465245 RGS17Q9UGC6 210 aaPredicted RBP19.1■□□□□ 0.65
TRA2B-208ENST00000465245 ERBINQ96RT1 1412 aa19.09■□□□□ 0.65
TRA2B-208ENST00000465245 KIF15Q9NS87 1388 aa19.09■□□□□ 0.65
TRA2B-208ENST00000465245 KDM5AP29375 1690 aaKnown RBP19.09■□□□□ 0.65
TRA2B-208ENST00000465245 ROBO1Q9Y6N7 1651 aa19.08■□□□□ 0.64
TRA2B-208ENST00000465245 MAP3K1Q13233 1512 aa19.07■□□□□ 0.64
TRA2B-208ENST00000465245 FAM135BQ49AJ0 1406 aa19.07■□□□□ 0.64
TRA2B-208ENST00000465245 TMEM2Q9UHN6 1383 aa19.06■□□□□ 0.64
TRA2B-208ENST00000465245 EFCAB6Q5THR3 1501 aa19.06■□□□□ 0.64
TRA2B-208ENST00000465245 KANK4Q5T7N3 995 aaPredicted RBP19.05■□□□□ 0.64
TRA2B-208ENST00000465245 STAG3Q9UJ98 1225 aa19.05■□□□□ 0.64
TRA2B-208ENST00000465245 TMEM94Q12767 1356 aa19.05■□□□□ 0.64
TRA2B-208ENST00000465245 PTPN23Q9H3S7 1636 aa19.04■□□□□ 0.64
TRA2B-208ENST00000465245 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.03■□□□□ 0.643e-8■□□□□ 11.1
TRA2B-208ENST00000465245 KANK1Q14678 1352 aa19.03■□□□□ 0.64
TRA2B-208ENST00000465245 RRP7BPQ9NSQ0 103 aa19.02■□□□□ 0.64
TRA2B-208ENST00000465245 ABCC5O15440 1437 aa19.01■□□□□ 0.63
TRA2B-208ENST00000465245 TET3O43151 1660 aa19.01■□□□□ 0.63
TRA2B-208ENST00000465245 LMTK2Q8IWU2 1503 aa19■□□□□ 0.63
TRA2B-208ENST00000465245 NWD1Q149M9 1564 aa19■□□□□ 0.63
TRA2B-208ENST00000465245 ADGRB3O60242 1522 aa19■□□□□ 0.63
TRA2B-208ENST00000465245 KCNA6P17658 529 aa18.99■□□□□ 0.63
TRA2B-208ENST00000465245 POTEAQ6S8J7 498 aa18.99■□□□□ 0.63
TRA2B-208ENST00000465245 DAPK1P53355 1430 aa18.99■□□□□ 0.63
TRA2B-208ENST00000465245 NKTRP30414 1462 aaKnown RBP18.98■□□□□ 0.63
TRA2B-208ENST00000465245 SETD1AO15047 1707 aaKnown RBP18.98■□□□□ 0.63
TRA2B-208ENST00000465245 PHLPP1O60346 1717 aa18.98■□□□□ 0.63
TRA2B-208ENST00000465245 PROSER2Q86WR7 435 aaPredicted RBP18.98■□□□□ 0.63
TRA2B-208ENST00000465245 IDI1Q13907 227 aa18.97■□□□□ 0.63
TRA2B-208ENST00000465245 SLC26A8Q96RN1 970 aa18.97■□□□□ 0.63
TRA2B-208ENST00000465245 RBM33Q96EV2 1170 aaKnown RBP18.96■□□□□ 0.63
TRA2B-208ENST00000465245 MYO5BQ9ULV0 1848 aa18.95■□□□□ 0.62
TRA2B-208ENST00000465245 MSH6P52701 1360 aa18.93■□□□□ 0.62
TRA2B-208ENST00000465245 NOS1P29475 1434 aa18.93■□□□□ 0.62
TRA2B-208ENST00000465245 CHD2O14647 1828 aaKnown RBP18.93■□□□□ 0.62
TRA2B-208ENST00000465245 ANKRD30AQ9BXX3 1397 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms