RNA–Protein interactions for RNA: ENST00000464812.1

NUDCD3-204, Transcript of NudC domain containing 3, humanhuman

TSL 5

Gene NUDCD3, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-204ENST00000464812 RSPH4AQ5TD94 716 aa13.56□□□□□ -0.24
NUDCD3-204ENST00000464812 KIF15Q9NS87 1388 aa13.56□□□□□ -0.24
NUDCD3-204ENST00000464812 RRP7BPQ9NSQ0 103 aa13.55□□□□□ -0.24
NUDCD3-204ENST00000464812 ANKRD30AQ9BXX3 1397 aa13.55□□□□□ -0.24
NUDCD3-204ENST00000464812 DUOX2Q9NRD8 1548 aa13.54□□□□□ -0.24
NUDCD3-204ENST00000464812 MROH1Q8NDA8 1641 aa13.54□□□□□ -0.24
NUDCD3-204ENST00000464812 EIF2AK4Q9P2K8 1649 aaKnown RBP13.54□□□□□ -0.24
NUDCD3-204ENST00000464812 DHX29Q7Z478 1369 aaKnown RBP13.54□□□□□ -0.24
NUDCD3-204ENST00000464812 C3P01024 1663 aa13.53□□□□□ -0.24
NUDCD3-204ENST00000464812 CEBPAP49715 358 aaPredicted RBP13.53□□□□□ -0.24
NUDCD3-204ENST00000464812 UNC13BO14795 1591 aa13.53□□□□□ -0.24
NUDCD3-204ENST00000464812 DEPDC5O75140 1603 aa13.53□□□□□ -0.24
NUDCD3-204ENST00000464812 TSPY4P0CV99 314 aa13.52□□□□□ -0.25
NUDCD3-204ENST00000464812 TSPY10P0CW01 314 aa13.52□□□□□ -0.25
NUDCD3-204ENST00000464812 MYT1LQ9UL68 1186 aa13.52□□□□□ -0.25
NUDCD3-204ENST00000464812 RAB3GAP2Q9H2M9 1393 aa13.52□□□□□ -0.25
NUDCD3-204ENST00000464812 SETD5Q9C0A6 1442 aa13.52□□□□□ -0.25
NUDCD3-204ENST00000464812 RNF17Q9BXT8 1623 aaKnown RBP13.51□□□□□ -0.25
NUDCD3-204ENST00000464812 LMTK3Q96Q04 1460 aa13.51□□□□□ -0.25
NUDCD3-204ENST00000464812 CLTCQ00610 1675 aaKnown RBP13.5□□□□□ -0.25
NUDCD3-204ENST00000464812 ERBINQ96RT1 1412 aa13.5□□□□□ -0.25
NUDCD3-204ENST00000464812 ANKRD50Q9ULJ7 1429 aa13.5□□□□□ -0.25
NUDCD3-204ENST00000464812 MROH2AA6NES4 1674 aa13.47□□□□□ -0.25
NUDCD3-204ENST00000464812 PRDM15P57071 1507 aaPredicted RBP13.47□□□□□ -0.25
NUDCD3-204ENST00000464812 CEP152O94986 1710 aa13.47□□□□□ -0.25
NUDCD3-204ENST00000464812 KDM5DQ9BY66 1539 aa13.46□□□□□ -0.25
NUDCD3-204ENST00000464812 IQGAP3Q86VI3 1631 aa13.46□□□□□ -0.26
NUDCD3-204ENST00000464812 VWDEQ8N2E2 1590 aa13.45□□□□□ -0.26
NUDCD3-204ENST00000464812 PZPP20742 1482 aa13.43□□□□□ -0.26
NUDCD3-204ENST00000464812 KIF3BO15066 747 aa13.43□□□□□ -0.26
NUDCD3-204ENST00000464812 GGT6Q6P531 493 aa13.43□□□□□ -0.26
NUDCD3-204ENST00000464812 ABCC3O15438 1527 aa13.43□□□□□ -0.26
NUDCD3-204ENST00000464812 ZMYM3Q14202 1370 aa13.43□□□□□ -0.26
NUDCD3-204ENST00000464812 PREX1Q8TCU6 1659 aa13.42□□□□□ -0.26
NUDCD3-204ENST00000464812 FAM135AQ9P2D6 1515 aa13.41□□□□□ -0.26
NUDCD3-204ENST00000464812 ZC3H13Q5T200 1668 aaKnown RBP13.4□□□□□ -0.26
NUDCD3-204ENST00000464812 CNTLNQ9NXG0 1405 aa13.4□□□□□ -0.26
NUDCD3-204ENST00000464812 HSPA2P54652 639 aa13.4□□□□□ -0.26
NUDCD3-204ENST00000464812 E9PCH4 1651 aa13.39□□□□□ -0.27
NUDCD3-204ENST00000464812 TET3O43151 1660 aa13.39□□□□□ -0.27
NUDCD3-204ENST00000464812 CAMSAP1Q5T5Y3 1602 aa13.39□□□□□ -0.27
NUDCD3-204ENST00000464812 DHX57Q6P158 1386 aaKnown RBP13.38□□□□□ -0.27
NUDCD3-204ENST00000464812 FBXO31Q5XUX0 539 aaPredicted RBP13.38□□□□□ -0.27
NUDCD3-204ENST00000464812 SETD1BQ9UPS6 1966 aaKnown RBP13.38□□□□□ -0.27
NUDCD3-204ENST00000464812 STRCQ7RTU9 1775 aa13.37□□□□□ -0.27
NUDCD3-204ENST00000464812 MYO3AQ8NEV4 1616 aa13.37□□□□□ -0.27
NUDCD3-204ENST00000464812 EFCAB6Q5THR3 1501 aa13.36□□□□□ -0.27
NUDCD3-204ENST00000464812 NPATQ14207 1427 aa13.36□□□□□ -0.27
NUDCD3-204ENST00000464812 LMTK2Q8IWU2 1503 aa13.35□□□□□ -0.27
NUDCD3-204ENST00000464812 HRCP23327 699 aa13.35□□□□□ -0.27
NUDCD3-204ENST00000464812 ZNF142P52746 1687 aaPredicted RBP13.34□□□□□ -0.27
NUDCD3-204ENST00000464812 NUP155O75694 1391 aa13.34□□□□□ -0.27
NUDCD3-204ENST00000464812 SPATA31D1Q6ZQQ2 1576 aa13.33□□□□□ -0.28
NUDCD3-204ENST00000464812 SPHKAPQ2M3C7 1700 aa13.33□□□□□ -0.28
NUDCD3-204ENST00000464812 CFAP65Q6ZU64 1925 aaKnown RBP13.33□□□□□ -0.28
NUDCD3-204ENST00000464812 TRIM52Q96A61 297 aa13.32□□□□□ -0.28
NUDCD3-204ENST00000464812 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.32□□□□□ -0.281e-7■■□□□ 13.5
NUDCD3-204ENST00000464812 CEP170BQ9Y4F5 1589 aaPredicted RBP13.32□□□□□ -0.28
NUDCD3-204ENST00000464812 ERVK-7P63135 1459 aa13.31□□□□□ -0.28
NUDCD3-204ENST00000464812 WASHC2CQ9Y4E1 1318 aa13.31□□□□□ -0.28
NUDCD3-204ENST00000464812 UHRF1BP1Q6BDS2 1440 aa13.3□□□□□ -0.28
NUDCD3-204ENST00000464812 ARHGAP31Q2M1Z3 1444 aa13.3□□□□□ -0.28
NUDCD3-204ENST00000464812 SYNMO15061 1565 aa13.29□□□□□ -0.28
NUDCD3-204ENST00000464812 MPHOSPH9Q99550 1183 aa13.28□□□□□ -0.28
NUDCD3-204ENST00000464812 KANK1Q14678 1352 aa13.28□□□□□ -0.28
NUDCD3-204ENST00000464812 ESF1Q9H501 851 aaKnown RBP13.27□□□□□ -0.29
NUDCD3-204ENST00000464812 TNRQ92752 1358 aa13.27□□□□□ -0.29
NUDCD3-204ENST00000464812 A2ML1A8K2U0 1454 aa13.27□□□□□ -0.29
NUDCD3-204ENST00000464812 CLTCL1P53675 1640 aa13.26□□□□□ -0.29
NUDCD3-204ENST00000464812 SLC4A1APQ9BWU0 796 aaKnown RBP13.26□□□□□ -0.29
NUDCD3-204ENST00000464812 NEURL4Q96JN8 1562 aa13.25□□□□□ -0.29
NUDCD3-204ENST00000464812 UGGT1Q9NYU2 1555 aa13.25□□□□□ -0.29
NUDCD3-204ENST00000464812 PLA2R1Q13018 1463 aa13.25□□□□□ -0.29
NUDCD3-204ENST00000464812 NOS1P29475 1434 aa13.25□□□□□ -0.29
NUDCD3-204ENST00000464812 TRPM2O94759 1503 aa13.24□□□□□ -0.29
NUDCD3-204ENST00000464812 ACIN1Q9UKV3 1341 aaKnown RBP13.24□□□□□ -0.29
NUDCD3-204ENST00000464812 PKD2Q13563 968 aa13.24□□□□□ -0.29
NUDCD3-204ENST00000464812 UBR1Q8IWV7 1749 aa13.24□□□□□ -0.29
NUDCD3-204ENST00000464812 PIK3C2BO00750 1634 aa13.24□□□□□ -0.29
NUDCD3-204ENST00000464812 RPRD2Q5VT52 1461 aaKnown RBP13.23□□□□□ -0.29
NUDCD3-204ENST00000464812 ANKRD30BQ9BXX2 1392 aa13.22□□□□□ -0.29
NUDCD3-204ENST00000464812 CCER1Q8TC90 406 aaPredicted RBP13.22□□□□□ -0.29
NUDCD3-204ENST00000464812 PTPRTO14522 1441 aa13.22□□□□□ -0.29
NUDCD3-204ENST00000464812 MYO5BQ9ULV0 1848 aa13.21□□□□□ -0.29
NUDCD3-204ENST00000464812 NLRP1Q9C000 1473 aa13.21□□□□□ -0.3
NUDCD3-204ENST00000464812 NCKAP5LQ9HCH0 1330 aa13.2□□□□□ -0.3
NUDCD3-204ENST00000464812 KIF1BO60333 1816 aa13.19□□□□□ -0.3
NUDCD3-204ENST00000464812 MAPK8IP2Q13387 824 aaPredicted RBP13.19□□□□□ -0.3
NUDCD3-204ENST00000464812 ARHGAP23Q9P227 1491 aa13.18□□□□□ -0.3
NUDCD3-204ENST00000464812 LTBP4Q8N2S1 1624 aa13.17□□□□□ -0.3
NUDCD3-204ENST00000464812 POLR1AO95602 1720 aaPredicted RBP13.17□□□□□ -0.3
NUDCD3-204ENST00000464812 IDI1Q13907 227 aa13.16□□□□□ -0.3
NUDCD3-204ENST00000464812 SIN3AQ96ST3 1273 aa13.16□□□□□ -0.3
NUDCD3-204ENST00000464812 IFT172Q9UG01 1749 aa13.16□□□□□ -0.3
NUDCD3-204ENST00000464812 ADGRB3O60242 1522 aa13.15□□□□□ -0.3
NUDCD3-204ENST00000464812 CLSPNQ9HAW4 1339 aa13.14□□□□□ -0.31
NUDCD3-204ENST00000464812 SLIT1O75093 1534 aa13.14□□□□□ -0.31
NUDCD3-204ENST00000464812 TMEM131LA2VDJ0 1609 aa13.14□□□□□ -0.31
NUDCD3-204ENST00000464812 LTKP29376 864 aa13.14□□□□□ -0.31
NUDCD3-204ENST00000464812 CCDC144AA2RUR9 1427 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms