RNA–Protein interactions for RNA: ENST00000464786.5

TSPAN1-202, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 872 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-202ENST00000464786 ANKRD50Q9ULJ7 1429 aa20.21■□□□□ 0.83
TSPAN1-202ENST00000464786 EIF2AK4Q9P2K8 1649 aaKnown RBP20.2■□□□□ 0.82
TSPAN1-202ENST00000464786 ZMYM3Q14202 1370 aa20.19■□□□□ 0.82
TSPAN1-202ENST00000464786 FER1L4A9Z1Z3 1794 aa20.18■□□□□ 0.82
TSPAN1-202ENST00000464786 KANK1Q14678 1352 aa20.18■□□□□ 0.82
TSPAN1-202ENST00000464786 FAM135AQ9P2D6 1515 aa20.17■□□□□ 0.82
TSPAN1-202ENST00000464786 RIMS1Q86UR5 1692 aaKnown RBP20.17■□□□□ 0.82
TSPAN1-202ENST00000464786 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.17■□□□□ 0.82
TSPAN1-202ENST00000464786 CEBPAP49715 358 aaPredicted RBP20.16■□□□□ 0.82
TSPAN1-202ENST00000464786 PLPPR3Q6T4P5 718 aa20.16■□□□□ 0.82
TSPAN1-202ENST00000464786 RNF17Q9BXT8 1623 aaKnown RBP20.14■□□□□ 0.81
TSPAN1-202ENST00000464786 SETD1BQ9UPS6 1966 aaKnown RBP20.12■□□□□ 0.81
TSPAN1-202ENST00000464786 KDM5DQ9BY66 1539 aa20.11■□□□□ 0.81
TSPAN1-202ENST00000464786 ACIN1Q9UKV3 1341 aaKnown RBP20.1■□□□□ 0.81
TSPAN1-202ENST00000464786 HFM1A2PYH4 1435 aa20.1■□□□□ 0.81
TSPAN1-202ENST00000464786 NAIPQ13075 1403 aa20.1■□□□□ 0.81
TSPAN1-202ENST00000464786 MROH2AA6NES4 1674 aa20.1■□□□□ 0.81
TSPAN1-202ENST00000464786 CLTCQ00610 1675 aaKnown RBP20.08■□□□□ 0.81
TSPAN1-202ENST00000464786 NPATQ14207 1427 aa20.08■□□□□ 0.8
TSPAN1-202ENST00000464786 PRDM15P57071 1507 aaPredicted RBP20.07■□□□□ 0.8
TSPAN1-202ENST00000464786 ABCC3O15438 1527 aa20.06■□□□□ 0.8
TSPAN1-202ENST00000464786 DEPDC5O75140 1603 aa20.05■□□□□ 0.8
TSPAN1-202ENST00000464786 MROH1Q8NDA8 1641 aa20.05■□□□□ 0.8
TSPAN1-202ENST00000464786 NUP155O75694 1391 aa20.05■□□□□ 0.8
TSPAN1-202ENST00000464786 C3P01024 1663 aa20.04■□□□□ 0.8
TSPAN1-202ENST00000464786 ZC3H13Q5T200 1668 aaKnown RBP20.03■□□□□ 0.8
TSPAN1-202ENST00000464786 ARHGAP31Q2M1Z3 1444 aa20.03■□□□□ 0.8
TSPAN1-202ENST00000464786 PZPP20742 1482 aa20.03■□□□□ 0.8
TSPAN1-202ENST00000464786 FBXO31Q5XUX0 539 aaPredicted RBP20.02■□□□□ 0.8
TSPAN1-202ENST00000464786 LMTK2Q8IWU2 1503 aa20.02■□□□□ 0.79
TSPAN1-202ENST00000464786 VWDEQ8N2E2 1590 aa20.01■□□□□ 0.79
TSPAN1-202ENST00000464786 TRIM52Q96A61 297 aa20■□□□□ 0.79
TSPAN1-202ENST00000464786 SETD5Q9C0A6 1442 aa20■□□□□ 0.79
TSPAN1-202ENST00000464786 UHRF1BP1Q6BDS2 1440 aa19.99■□□□□ 0.79
TSPAN1-202ENST00000464786 HRCP23327 699 aa19.98■□□□□ 0.79
TSPAN1-202ENST00000464786 UNC13BO14795 1591 aa19.98■□□□□ 0.79
TSPAN1-202ENST00000464786 GCC2Q8IWJ2 1684 aa19.97■□□□□ 0.79
TSPAN1-202ENST00000464786 TNRQ92752 1358 aa19.97■□□□□ 0.79
TSPAN1-202ENST00000464786 CEP152O94986 1710 aa19.96■□□□□ 0.79
TSPAN1-202ENST00000464786 TRIM26Q12899 539 aaPredicted RBP19.95■□□□□ 0.78
TSPAN1-202ENST00000464786 CAMSAP1Q5T5Y3 1602 aa19.94■□□□□ 0.78
TSPAN1-202ENST00000464786 RPRD2Q5VT52 1461 aaKnown RBP19.93■□□□□ 0.78
TSPAN1-202ENST00000464786 ERVK-7P63135 1459 aa19.92■□□□□ 0.78
TSPAN1-202ENST00000464786 IQGAP3Q86VI3 1631 aa19.91■□□□□ 0.78
TSPAN1-202ENST00000464786 PREX1Q8TCU6 1659 aa19.91■□□□□ 0.78
TSPAN1-202ENST00000464786 SLC4A1APQ9BWU0 796 aaKnown RBP19.91■□□□□ 0.78
TSPAN1-202ENST00000464786 SLC52A1Q9NWF4 448 aa19.91■□□□□ 0.78
TSPAN1-202ENST00000464786 LMTK3Q96Q04 1460 aa19.91■□□□□ 0.78
TSPAN1-202ENST00000464786 EFCAB6Q5THR3 1501 aa19.91■□□□□ 0.78
TSPAN1-202ENST00000464786 CFAP65Q6ZU64 1925 aaKnown RBP19.9■□□□□ 0.78
TSPAN1-202ENST00000464786 SPATA31D1Q6ZQQ2 1576 aa19.9■□□□□ 0.78
TSPAN1-202ENST00000464786 TET3O43151 1660 aa19.9■□□□□ 0.78
TSPAN1-202ENST00000464786 THEMISQ8N1K5 641 aaPredicted RBP19.89■□□□□ 0.77
TSPAN1-202ENST00000464786 NLRP1Q9C000 1473 aa19.89■□□□□ 0.77
TSPAN1-202ENST00000464786 RAB3GAP2Q9H2M9 1393 aa19.88■□□□□ 0.77
TSPAN1-202ENST00000464786 HSPA2P54652 639 aa19.88■□□□□ 0.77
TSPAN1-202ENST00000464786 A2ML1A8K2U0 1454 aa19.87■□□□□ 0.77
TSPAN1-202ENST00000464786 NOS1P29475 1434 aa19.87■□□□□ 0.77
TSPAN1-202ENST00000464786 PKD2Q13563 968 aa19.87■□□□□ 0.77
TSPAN1-202ENST00000464786 ILDR1Q86SU0 546 aaPredicted RBP19.87■□□□□ 0.77
TSPAN1-202ENST00000464786 MPHOSPH9Q99550 1183 aa19.86■□□□□ 0.77
TSPAN1-202ENST00000464786 IDI1Q13907 227 aa19.85■□□□□ 0.77
TSPAN1-202ENST00000464786 STAG3Q9UJ98 1225 aa19.84■□□□□ 0.77
TSPAN1-202ENST00000464786 DMRT2Q9Y5R5 561 aa19.83■□□□□ 0.77
TSPAN1-202ENST00000464786 CEP170BQ9Y4F5 1589 aaPredicted RBP19.82■□□□□ 0.76
TSPAN1-202ENST00000464786 MYO3AQ8NEV4 1616 aa19.8■□□□□ 0.76
TSPAN1-202ENST00000464786 PTPRTO14522 1441 aa19.79■□□□□ 0.76
TSPAN1-202ENST00000464786 E9PCH4 1651 aa19.79■□□□□ 0.76
TSPAN1-202ENST00000464786 UGGT1Q9NYU2 1555 aa19.78■□□□□ 0.76
TSPAN1-202ENST00000464786 ANKLE2Q86XL3 938 aa19.78■□□□□ 0.76
TSPAN1-202ENST00000464786 ZNF142P52746 1687 aaPredicted RBP19.78■□□□□ 0.76
TSPAN1-202ENST00000464786 HDGFP51858 240 aaKnown RBP19.76■□□□□ 0.75
TSPAN1-202ENST00000464786 SYNMO15061 1565 aa19.75■□□□□ 0.75
TSPAN1-202ENST00000464786 PLA2R1Q13018 1463 aa19.75■□□□□ 0.75
TSPAN1-202ENST00000464786 EID1Q9Y6B2 187 aa19.74■□□□□ 0.75
TSPAN1-202ENST00000464786 CHGAP10645 457 aaKnown RBP19.73■□□□□ 0.75
TSPAN1-202ENST00000464786 FOXD1Q16676 465 aa19.72■□□□□ 0.75
TSPAN1-202ENST00000464786 NCKAP5LQ9HCH0 1330 aa19.72■□□□□ 0.75
TSPAN1-202ENST00000464786 TXNDC2Q86VQ3 553 aa19.7■□□□□ 0.74
TSPAN1-202ENST00000464786 TMEM2Q9UHN6 1383 aa19.7■□□□□ 0.74
TSPAN1-202ENST00000464786 KDM5AP29375 1690 aaKnown RBP19.69■□□□□ 0.74
TSPAN1-202ENST00000464786 PIK3C2BO00750 1634 aa19.69■□□□□ 0.74
TSPAN1-202ENST00000464786 SPHKAPQ2M3C7 1700 aa19.68■□□□□ 0.74
TSPAN1-202ENST00000464786 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.68■□□□□ 0.74
TSPAN1-202ENST00000464786 UBR1Q8IWV7 1749 aa19.68■□□□□ 0.74
TSPAN1-202ENST00000464786 TRPM2O94759 1503 aa19.67■□□□□ 0.74
TSPAN1-202ENST00000464786 ARHGAP23Q9P227 1491 aa19.66■□□□□ 0.74
TSPAN1-202ENST00000464786 ADGRB3O60242 1522 aa19.66■□□□□ 0.74
TSPAN1-202ENST00000464786 LTKP29376 864 aa19.65■□□□□ 0.74
TSPAN1-202ENST00000464786 CCDC144AA2RUR9 1427 aa19.65■□□□□ 0.74
TSPAN1-202ENST00000464786 SLIT1O75093 1534 aa19.65■□□□□ 0.74
TSPAN1-202ENST00000464786 STRCQ7RTU9 1775 aa19.65■□□□□ 0.74
TSPAN1-202ENST00000464786 ZNF326Q5BKZ1 582 aaKnown RBP19.64■□□□□ 0.73
TSPAN1-202ENST00000464786 ANKRD30BQ9BXX2 1392 aa19.62■□□□□ 0.73
TSPAN1-202ENST00000464786 RPGRIP1LQ68CZ1 1315 aa19.62■□□□□ 0.73
TSPAN1-202ENST00000464786 PCGF6Q9BYE7 350 aa19.62■□□□□ 0.73
TSPAN1-202ENST00000464786 TMEM131LA2VDJ0 1609 aa19.62■□□□□ 0.73
TSPAN1-202ENST00000464786 MED14O60244 1454 aa19.61■□□□□ 0.73
TSPAN1-202ENST00000464786 SCAF11Q99590 1463 aaKnown RBP19.61■□□□□ 0.73
TSPAN1-202ENST00000464786 PPP1R15AO75807 674 aaPredicted RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms