RNA–Protein interactions for RNA: ENST00000464586.1

PLD3-208, Transcript of phospholipase D family member 3, humanhuman

TSL 1 (best)

Gene PLD3, Length 253 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-208ENST00000464586 ERBINQ96RT1 1412 aa12.55□□□□□ -0.4
PLD3-208ENST00000464586 C3P01024 1663 aa12.55□□□□□ -0.4
PLD3-208ENST00000464586 ITGAEP38570 1179 aa12.55□□□□□ -0.4
PLD3-208ENST00000464586 PPP6R1Q9UPN7 881 aa12.55□□□□□ -0.4
PLD3-208ENST00000464586 PTPRKQ15262 1439 aa12.54□□□□□ -0.4
PLD3-208ENST00000464586 CNTLNQ9NXG0 1405 aa12.54□□□□□ -0.4
PLD3-208ENST00000464586 FAM135AQ9P2D6 1515 aa12.54□□□□□ -0.4
PLD3-208ENST00000464586 ROCK1Q13464 1354 aa12.54□□□□□ -0.4
PLD3-208ENST00000464586 ZC3H13Q5T200 1668 aaKnown RBP12.53□□□□□ -0.4
PLD3-208ENST00000464586 DEPDC5O75140 1603 aa12.52□□□□□ -0.4
PLD3-208ENST00000464586 CEP152O94986 1710 aa12.52□□□□□ -0.41
PLD3-208ENST00000464586 CFAP65Q6ZU64 1925 aaKnown RBP12.52□□□□□ -0.41
PLD3-208ENST00000464586 GCC2Q8IWJ2 1684 aa12.51□□□□□ -0.41
PLD3-208ENST00000464586 ANKRD50Q9ULJ7 1429 aa12.5□□□□□ -0.41
PLD3-208ENST00000464586 KDM5DQ9BY66 1539 aa12.5□□□□□ -0.41
PLD3-208ENST00000464586 MROH1Q8NDA8 1641 aa12.5□□□□□ -0.41
PLD3-208ENST00000464586 PLPPR3Q6T4P5 718 aa12.49□□□□□ -0.41
PLD3-208ENST00000464586 PRDM15P57071 1507 aaPredicted RBP12.48□□□□□ -0.41
PLD3-208ENST00000464586 WASHC2CQ9Y4E1 1318 aa12.48□□□□□ -0.41
PLD3-208ENST00000464586 PREX1Q8TCU6 1659 aa12.48□□□□□ -0.41
PLD3-208ENST00000464586 ZMYM3Q14202 1370 aa12.47□□□□□ -0.41
PLD3-208ENST00000464586 KANK1Q14678 1352 aa12.47□□□□□ -0.41
PLD3-208ENST00000464586 CAMSAP1Q5T5Y3 1602 aa12.47□□□□□ -0.41
PLD3-208ENST00000464586 CEBPAP49715 358 aaPredicted RBP12.46□□□□□ -0.41
PLD3-208ENST00000464586 UNC13BO14795 1591 aa12.46□□□□□ -0.42
PLD3-208ENST00000464586 ABCC3O15438 1527 aa12.46□□□□□ -0.42
PLD3-208ENST00000464586 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.45□□□□□ -0.42
PLD3-208ENST00000464586 VWDEQ8N2E2 1590 aa12.43□□□□□ -0.42
PLD3-208ENST00000464586 NAIPQ13075 1403 aa12.43□□□□□ -0.42
PLD3-208ENST00000464586 NPATQ14207 1427 aa12.43□□□□□ -0.42
PLD3-208ENST00000464586 PZPP20742 1482 aa12.42□□□□□ -0.42
PLD3-208ENST00000464586 HFM1A2PYH4 1435 aa12.42□□□□□ -0.42
PLD3-208ENST00000464586 LMTK2Q8IWU2 1503 aa12.42□□□□□ -0.42
PLD3-208ENST00000464586 TET3O43151 1660 aa12.42□□□□□ -0.42
PLD3-208ENST00000464586 IQGAP3Q86VI3 1631 aa12.41□□□□□ -0.42
PLD3-208ENST00000464586 UHRF1BP1Q6BDS2 1440 aa12.4□□□□□ -0.42
PLD3-208ENST00000464586 ARHGAP31Q2M1Z3 1444 aa12.39□□□□□ -0.43
PLD3-208ENST00000464586 MYO3AQ8NEV4 1616 aa12.39□□□□□ -0.43
PLD3-208ENST00000464586 ZNF142P52746 1687 aaPredicted RBP12.38□□□□□ -0.43
PLD3-208ENST00000464586 EFCAB6Q5THR3 1501 aa12.38□□□□□ -0.43
PLD3-208ENST00000464586 LMTK3Q96Q04 1460 aa12.38□□□□□ -0.43
PLD3-208ENST00000464586 SPATA31D1Q6ZQQ2 1576 aa12.38□□□□□ -0.43
PLD3-208ENST00000464586 FBXO31Q5XUX0 539 aaPredicted RBP12.37□□□□□ -0.43
PLD3-208ENST00000464586 NUP155O75694 1391 aa12.37□□□□□ -0.43
PLD3-208ENST00000464586 ACIN1Q9UKV3 1341 aaKnown RBP12.37□□□□□ -0.43
PLD3-208ENST00000464586 E9PCH4 1651 aa12.36□□□□□ -0.43
PLD3-208ENST00000464586 ERVK-7P63135 1459 aa12.36□□□□□ -0.43
PLD3-208ENST00000464586 TNRQ92752 1358 aa12.36□□□□□ -0.43
PLD3-208ENST00000464586 RPRD2Q5VT52 1461 aaKnown RBP12.35□□□□□ -0.43
PLD3-208ENST00000464586 SETD5Q9C0A6 1442 aa12.35□□□□□ -0.43
PLD3-208ENST00000464586 CEP170BQ9Y4F5 1589 aaPredicted RBP12.35□□□□□ -0.43
PLD3-208ENST00000464586 TRIM52Q96A61 297 aa12.34□□□□□ -0.43
PLD3-208ENST00000464586 NLRP1Q9C000 1473 aa12.34□□□□□ -0.43
PLD3-208ENST00000464586 SPHKAPQ2M3C7 1700 aa12.33□□□□□ -0.44
PLD3-208ENST00000464586 A2ML1A8K2U0 1454 aa12.33□□□□□ -0.44
PLD3-208ENST00000464586 SYNMO15061 1565 aa12.3□□□□□ -0.44
PLD3-208ENST00000464586 NOS1P29475 1434 aa12.3□□□□□ -0.44
PLD3-208ENST00000464586 KDM5AP29375 1690 aaKnown RBP12.3□□□□□ -0.44
PLD3-208ENST00000464586 HSPA2P54652 639 aa12.3□□□□□ -0.44
PLD3-208ENST00000464586 UBR1Q8IWV7 1749 aa12.3□□□□□ -0.44
PLD3-208ENST00000464586 STRCQ7RTU9 1775 aa12.3□□□□□ -0.44
PLD3-208ENST00000464586 UGGT1Q9NYU2 1555 aa12.3□□□□□ -0.44
PLD3-208ENST00000464586 PIK3C2BO00750 1634 aa12.29□□□□□ -0.44
PLD3-208ENST00000464586 POLR1AO95602 1720 aaPredicted RBP12.29□□□□□ -0.44
PLD3-208ENST00000464586 MYO5BQ9ULV0 1848 aa12.29□□□□□ -0.44
PLD3-208ENST00000464586 RAB3GAP2Q9H2M9 1393 aa12.29□□□□□ -0.44
PLD3-208ENST00000464586 SLC4A1APQ9BWU0 796 aaKnown RBP12.28□□□□□ -0.44
PLD3-208ENST00000464586 KIF1BO60333 1816 aa12.27□□□□□ -0.44
PLD3-208ENST00000464586 HRCP23327 699 aa12.27□□□□□ -0.45
PLD3-208ENST00000464586 TRIM26Q12899 539 aaPredicted RBP12.27□□□□□ -0.45
PLD3-208ENST00000464586 THEMISQ8N1K5 641 aaPredicted RBP12.27□□□□□ -0.45
PLD3-208ENST00000464586 SLC52A1Q9NWF4 448 aa12.27□□□□□ -0.45
PLD3-208ENST00000464586 PLA2R1Q13018 1463 aa12.26□□□□□ -0.45
PLD3-208ENST00000464586 PKD2Q13563 968 aa12.25□□□□□ -0.45
PLD3-208ENST00000464586 IDI1Q13907 227 aa12.25□□□□□ -0.45
PLD3-208ENST00000464586 STAG3Q9UJ98 1225 aa12.25□□□□□ -0.45
PLD3-208ENST00000464586 ADGRB3O60242 1522 aa12.24□□□□□ -0.45
PLD3-208ENST00000464586 MPHOSPH9Q99550 1183 aa12.24□□□□□ -0.45
PLD3-208ENST00000464586 TRPM2O94759 1503 aa12.23□□□□□ -0.45
PLD3-208ENST00000464586 PTPRTO14522 1441 aa12.23□□□□□ -0.45
PLD3-208ENST00000464586 DMRT2Q9Y5R5 561 aa12.23□□□□□ -0.45
PLD3-208ENST00000464586 TMEM131LA2VDJ0 1609 aa12.22□□□□□ -0.45
PLD3-208ENST00000464586 ANKLE2Q86XL3 938 aa12.21□□□□□ -0.45
PLD3-208ENST00000464586 CLTCL1P53675 1640 aa12.21□□□□□ -0.46
PLD3-208ENST00000464586 SLIT1O75093 1534 aa12.21□□□□□ -0.46
PLD3-208ENST00000464586 CHGAP10645 457 aaKnown RBP12.2□□□□□ -0.46
PLD3-208ENST00000464586 NCKAP5LQ9HCH0 1330 aa12.19□□□□□ -0.46
PLD3-208ENST00000464586 ARHGAP23Q9P227 1491 aa12.19□□□□□ -0.46
PLD3-208ENST00000464586 EID1Q9Y6B2 187 aa12.18□□□□□ -0.46
PLD3-208ENST00000464586 IQGAP1P46940 1657 aa12.18□□□□□ -0.46
PLD3-208ENST00000464586 NEURL4Q96JN8 1562 aa12.18□□□□□ -0.46
PLD3-208ENST00000464586 TMEM2Q9UHN6 1383 aa12.18□□□□□ -0.46
PLD3-208ENST00000464586 HDGFP51858 240 aaKnown RBP12.17□□□□□ -0.46
PLD3-208ENST00000464586 FOXD1Q16676 465 aa12.17□□□□□ -0.46
PLD3-208ENST00000464586 MED14O60244 1454 aa12.16□□□□□ -0.46
PLD3-208ENST00000464586 SCAF11Q99590 1463 aaKnown RBP12.16□□□□□ -0.46
PLD3-208ENST00000464586 TXNDC2Q86VQ3 553 aa12.16□□□□□ -0.46
PLD3-208ENST00000464586 CCDC144AA2RUR9 1427 aa12.15□□□□□ -0.46
PLD3-208ENST00000464586 NPHP4O75161 1426 aaPredicted RBP12.15□□□□□ -0.46
PLD3-208ENST00000464586 RIMS2Q9UQ26 1411 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms