RNA–Protein interactions for RNA: ENST00000464526.1

LST1-220, leukocyte specific transcript 1, humanhuman

TSL 1 (best)

Gene LST1, Length 1,832 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-220ENST00000464526 GGT6Q6P531 493 aa26.39■■□□□ 1.82
LST1-220ENST00000464526 MADDQ8WXG6 1647 aa26.38■■□□□ 1.81
LST1-220ENST00000464526 RAB3GAP2Q9H2M9 1393 aa26.37■■□□□ 1.81
LST1-220ENST00000464526 PRDM15P57071 1507 aaPredicted RBP26.37■■□□□ 1.81
LST1-220ENST00000464526 UNC13BO14795 1591 aa26.37■■□□□ 1.81
LST1-220ENST00000464526 SETD5Q9C0A6 1442 aa26.37■■□□□ 1.81
LST1-220ENST00000464526 ADAMTSL3P82987 1691 aa26.36■■□□□ 1.81
LST1-220ENST00000464526 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.34■■□□□ 1.81
LST1-220ENST00000464526 CEP152O94986 1710 aa26.34■■□□□ 1.81
LST1-220ENST00000464526 FER1L4A9Z1Z3 1794 aa26.33■■□□□ 1.81
LST1-220ENST00000464526 CLTCQ00610 1675 aaKnown RBP26.31■■□□□ 1.8
LST1-220ENST00000464526 VWDEQ8N2E2 1590 aa26.3■■□□□ 1.8
LST1-220ENST00000464526 KDM4FA0A1W2PPD8 638 aa26.3■■□□□ 1.8
LST1-220ENST00000464526 RIMS1Q86UR5 1692 aaKnown RBP26.3■■□□□ 1.8
LST1-220ENST00000464526 ABCC3O15438 1527 aa26.3■■□□□ 1.8
LST1-220ENST00000464526 KDM5DQ9BY66 1539 aa26.27■■□□□ 1.8
LST1-220ENST00000464526 IQGAP3Q86VI3 1631 aa26.25■■□□□ 1.79
LST1-220ENST00000464526 PZPP20742 1482 aa26.24■■□□□ 1.79
LST1-220ENST00000464526 NUP155O75694 1391 aa26.24■■□□□ 1.79
LST1-220ENST00000464526 FAM135AQ9P2D6 1515 aa26.23■■□□□ 1.79
LST1-220ENST00000464526 CAMSAP1Q5T5Y3 1602 aa26.22■■□□□ 1.79
LST1-220ENST00000464526 ZC3H13Q5T200 1668 aaKnown RBP26.21■■□□□ 1.79
LST1-220ENST00000464526 TRIM52Q96A61 297 aa26.2■■□□□ 1.78
LST1-220ENST00000464526 WASHC2CQ9Y4E1 1318 aa26.2■■□□□ 1.78
LST1-220ENST00000464526 C3P01024 1663 aa26.19■■□□□ 1.78
LST1-220ENST00000464526 PLPPR3Q6T4P5 718 aa26.18■■□□□ 1.78
LST1-220ENST00000464526 CEBPAP49715 358 aaPredicted RBP26.18■■□□□ 1.78
LST1-220ENST00000464526 LMTK2Q8IWU2 1503 aa26.17■■□□□ 1.78
LST1-220ENST00000464526 EFCAB6Q5THR3 1501 aa26.17■■□□□ 1.78
LST1-220ENST00000464526 TET3O43151 1660 aa26.16■■□□□ 1.78
LST1-220ENST00000464526 MROH2AA6NES4 1674 aa26.15■■□□□ 1.78
LST1-220ENST00000464526 PTPRMP28827 1452 aa26.15■■□□□ 1.78
LST1-220ENST00000464526 E9PCH4 1651 aa26.15■■□□□ 1.78
LST1-220ENST00000464526 KANK1Q14678 1352 aa26.15■■□□□ 1.78
LST1-220ENST00000464526 NPATQ14207 1427 aa26.14■■□□□ 1.78
LST1-220ENST00000464526 ZMYM3Q14202 1370 aa26.13■■□□□ 1.77
LST1-220ENST00000464526 CFAP65Q6ZU64 1925 aaKnown RBP26.13■■□□□ 1.77
LST1-220ENST00000464526 CNTLNQ9NXG0 1405 aa26.11■■□□□ 1.77
LST1-220ENST00000464526 FOXD1Q16676 465 aa26.11■■□□□ 1.77
LST1-220ENST00000464526 FBXO31Q5XUX0 539 aaPredicted RBP26.09■■□□□ 1.77
LST1-220ENST00000464526 ESF1Q9H501 851 aaKnown RBP26.09■■□□□ 1.77
LST1-220ENST00000464526 PPP6R1Q9UPN7 881 aa26.09■■□□□ 1.77
LST1-220ENST00000464526 SLC4A1APQ9BWU0 796 aaKnown RBP26.07■■□□□ 1.76
LST1-220ENST00000464526 MPHOSPH9Q99550 1183 aa26.06■■□□□ 1.76
LST1-220ENST00000464526 PREX1Q8TCU6 1659 aa26.05■■□□□ 1.76
LST1-220ENST00000464526 HRCP23327 699 aa26.04■■□□□ 1.76
LST1-220ENST00000464526 PKD2Q13563 968 aa26.04■■□□□ 1.76
LST1-220ENST00000464526 ARHGAP31Q2M1Z3 1444 aa26.04■■□□□ 1.76
LST1-220ENST00000464526 ERVK-7P63135 1459 aa26.03■■□□□ 1.76
LST1-220ENST00000464526 SYNMO15061 1565 aa26.02■■□□□ 1.76
LST1-220ENST00000464526 UGGT1Q9NYU2 1555 aa26.02■■□□□ 1.76
LST1-220ENST00000464526 SPATA31D1Q6ZQQ2 1576 aa26■■□□□ 1.75
LST1-220ENST00000464526 PLA2R1Q13018 1463 aa26■■□□□ 1.75
LST1-220ENST00000464526 DHX57Q6P158 1386 aaKnown RBP26■■□□□ 1.75
LST1-220ENST00000464526 SPHKAPQ2M3C7 1700 aa25.97■■□□□ 1.75
LST1-220ENST00000464526 RPRD2Q5VT52 1461 aaKnown RBP25.97■■□□□ 1.75
LST1-220ENST00000464526 NOS1P29475 1434 aa25.97■■□□□ 1.75
LST1-220ENST00000464526 MYO3AQ8NEV4 1616 aa25.93■■□□□ 1.74
LST1-220ENST00000464526 PTPRTO14522 1441 aa25.92■■□□□ 1.74
LST1-220ENST00000464526 TNRQ92752 1358 aa25.91■■□□□ 1.74
LST1-220ENST00000464526 CLTCL1P53675 1640 aa25.91■■□□□ 1.74
LST1-220ENST00000464526 TRPM2O94759 1503 aa25.9■■□□□ 1.74
LST1-220ENST00000464526 PIK3C2BO00750 1634 aa25.88■■□□□ 1.73
LST1-220ENST00000464526 ANKRD30BQ9BXX2 1392 aa25.85■■□□□ 1.73
LST1-220ENST00000464526 ACIN1Q9UKV3 1341 aaKnown RBP25.82■■□□□ 1.72
LST1-220ENST00000464526 IDI1Q13907 227 aa25.82■■□□□ 1.72
LST1-220ENST00000464526 CEP170BQ9Y4F5 1589 aaPredicted RBP25.82■■□□□ 1.72
LST1-220ENST00000464526 MYO5BQ9ULV0 1848 aa25.81■■□□□ 1.72
LST1-220ENST00000464526 LMTK3Q96Q04 1460 aa25.8■■□□□ 1.72
LST1-220ENST00000464526 ZNF142P52746 1687 aaPredicted RBP25.8■■□□□ 1.72
LST1-220ENST00000464526 SETD1BQ9UPS6 1966 aaKnown RBP25.79■■□□□ 1.72
LST1-220ENST00000464526 UBR1Q8IWV7 1749 aa25.78■■□□□ 1.72
LST1-220ENST00000464526 NLRP1Q9C000 1473 aa25.77■■□□□ 1.72
LST1-220ENST00000464526 UHRF1BP1Q6BDS2 1440 aa25.77■■□□□ 1.72
LST1-220ENST00000464526 TMEM131LA2VDJ0 1609 aa25.76■■□□□ 1.71
LST1-220ENST00000464526 A2ML1A8K2U0 1454 aa25.76■■□□□ 1.71
LST1-220ENST00000464526 ADGRB3O60242 1522 aa25.75■■□□□ 1.71
LST1-220ENST00000464526 SIN3AQ96ST3 1273 aa25.75■■□□□ 1.71
LST1-220ENST00000464526 CCDC144AA2RUR9 1427 aa25.75■■□□□ 1.71
LST1-220ENST00000464526 HSPA2P54652 639 aa25.72■■□□□ 1.71
LST1-220ENST00000464526 SLC52A1Q9NWF4 448 aa25.7■■□□□ 1.71
LST1-220ENST00000464526 CHGAP10645 457 aaKnown RBP25.7■■□□□ 1.7
LST1-220ENST00000464526 KIF1BO60333 1816 aa25.69■■□□□ 1.7
LST1-220ENST00000464526 SPATA31E1Q6ZUB1 1445 aa25.69■■□□□ 1.7
LST1-220ENST00000464526 CCER1Q8TC90 406 aaPredicted RBP25.67■■□□□ 1.7
LST1-220ENST00000464526 AEBP2Q6ZN18 517 aaPredicted RBP25.65■■□□□ 1.7
LST1-220ENST00000464526 KDM5AP29375 1690 aaKnown RBP25.64■■□□□ 1.7
LST1-220ENST00000464526 NEUROD1Q13562 356 aa25.63■■□□□ 1.69
LST1-220ENST00000464526 RGL3Q3MIN7 710 aa25.62■■□□□ 1.69
LST1-220ENST00000464526 NUTM2DQ5VT03 806 aaPredicted RBP25.62■■□□□ 1.69
LST1-220ENST00000464526 STAG3Q9UJ98 1225 aa25.61■■□□□ 1.69
LST1-220ENST00000464526 SENP3Q9H4L4 574 aaPredicted RBP25.6■■□□□ 1.69
LST1-220ENST00000464526 NEXMIFQ5QGS0 1516 aa25.6■■□□□ 1.69
LST1-220ENST00000464526 ARHGAP23Q9P227 1491 aa25.59■■□□□ 1.69
LST1-220ENST00000464526 ZFYVE9O95405 1425 aa25.59■■□□□ 1.69
LST1-220ENST00000464526 TMEM2Q9UHN6 1383 aa25.58■■□□□ 1.69
LST1-220ENST00000464526 SLIT1O75093 1534 aa25.58■■□□□ 1.69
LST1-220ENST00000464526 IFT172Q9UG01 1749 aa25.58■■□□□ 1.68
LST1-220ENST00000464526 LTKP29376 864 aa25.56■■□□□ 1.68
LST1-220ENST00000464526 STRCQ7RTU9 1775 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms