RNA–Protein interactions for RNA: ENST00000464304.1

HMG20B-208, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-208ENST00000464304 RNF17Q9BXT8 1623 aaKnown RBP28.54■■■□□ 2.16
HMG20B-208ENST00000464304 KIF3BO15066 747 aa28.53■■■□□ 2.16
HMG20B-208ENST00000464304 ERBINQ96RT1 1412 aa28.52■■■□□ 2.16
HMG20B-208ENST00000464304 CLTCQ00610 1675 aaKnown RBP28.52■■■□□ 2.16
HMG20B-208ENST00000464304 ROCK1Q13464 1354 aa28.5■■■□□ 2.15
HMG20B-208ENST00000464304 GGT6Q6P531 493 aa28.5■■■□□ 2.15
HMG20B-208ENST00000464304 MROH1Q8NDA8 1641 aa28.49■■■□□ 2.15
HMG20B-208ENST00000464304 MROH2AA6NES4 1674 aa28.48■■■□□ 2.15
HMG20B-208ENST00000464304 C3P01024 1663 aa28.47■■■□□ 2.15
HMG20B-208ENST00000464304 DEPDC5O75140 1603 aa28.47■■■□□ 2.15
HMG20B-208ENST00000464304 GCC2Q8IWJ2 1684 aa28.45■■■□□ 2.14
HMG20B-208ENST00000464304 ANKRD50Q9ULJ7 1429 aa28.43■■■□□ 2.14
HMG20B-208ENST00000464304 CEP152O94986 1710 aa28.43■■■□□ 2.14
HMG20B-208ENST00000464304 CNTLNQ9NXG0 1405 aa28.42■■■□□ 2.14
HMG20B-208ENST00000464304 PRDM15P57071 1507 aaPredicted RBP28.41■■■□□ 2.14
HMG20B-208ENST00000464304 ZC3H13Q5T200 1668 aaKnown RBP28.41■■■□□ 2.14
HMG20B-208ENST00000464304 KDM5DQ9BY66 1539 aa28.4■■■□□ 2.14
HMG20B-208ENST00000464304 FAM135AQ9P2D6 1515 aa28.4■■■□□ 2.14
HMG20B-208ENST00000464304 CERKQ8TCT0 537 aa28.4■■■□□ 2.14
HMG20B-208ENST00000464304 ESF1Q9H501 851 aaKnown RBP28.4■■■□□ 2.14
HMG20B-208ENST00000464304 PPP6R1Q9UPN7 881 aa28.37■■■□□ 2.13
HMG20B-208ENST00000464304 ABCC3O15438 1527 aa28.35■■■□□ 2.13
HMG20B-208ENST00000464304 UNC13BO14795 1591 aa28.35■■■□□ 2.13
HMG20B-208ENST00000464304 STRCQ7RTU9 1775 aa28.34■■■□□ 2.13
HMG20B-208ENST00000464304 PREX1Q8TCU6 1659 aa28.34■■■□□ 2.13
HMG20B-208ENST00000464304 CAMSAP1Q5T5Y3 1602 aa28.33■■■□□ 2.13
HMG20B-208ENST00000464304 CEBPAP49715 358 aaPredicted RBP28.33■■■□□ 2.13
HMG20B-208ENST00000464304 NAIPQ13075 1403 aa28.33■■■□□ 2.13
HMG20B-208ENST00000464304 ZMYM3Q14202 1370 aa28.31■■■□□ 2.12
HMG20B-208ENST00000464304 VWDEQ8N2E2 1590 aa28.31■■■□□ 2.12
HMG20B-208ENST00000464304 CFAP65Q6ZU64 1925 aaKnown RBP28.31■■■□□ 2.12
HMG20B-208ENST00000464304 HFM1A2PYH4 1435 aa28.3■■■□□ 2.12
HMG20B-208ENST00000464304 WASHC2CQ9Y4E1 1318 aa28.3■■■□□ 2.12
HMG20B-208ENST00000464304 SETD1BQ9UPS6 1966 aaKnown RBP28.3■■■□□ 2.12
HMG20B-208ENST00000464304 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.29■■■□□ 2.122e-6■□□□□ 10.5
HMG20B-208ENST00000464304 ILDR2Q71H61 639 aa28.27■■■□□ 2.12
HMG20B-208ENST00000464304 KANK1Q14678 1352 aa28.24■■■□□ 2.11
HMG20B-208ENST00000464304 IQGAP3Q86VI3 1631 aa28.23■■■□□ 2.11
HMG20B-208ENST00000464304 LMTK2Q8IWU2 1503 aa28.23■■■□□ 2.11
HMG20B-208ENST00000464304 PZPP20742 1482 aa28.22■■■□□ 2.11
HMG20B-208ENST00000464304 TET3O43151 1660 aa28.2■■■□□ 2.11
HMG20B-208ENST00000464304 NPATQ14207 1427 aa28.18■■■□□ 2.1
HMG20B-208ENST00000464304 EFCAB6Q5THR3 1501 aa28.17■■■□□ 2.1
HMG20B-208ENST00000464304 MYO3AQ8NEV4 1616 aa28.15■■■□□ 2.1
HMG20B-208ENST00000464304 DISP3Q9P2K9 1392 aa28.15■■■□□ 2.1
HMG20B-208ENST00000464304 NUP155O75694 1391 aa28.13■■■□□ 2.09
HMG20B-208ENST00000464304 ARHGAP31Q2M1Z3 1444 aa28.13■■■□□ 2.09
HMG20B-208ENST00000464304 E9PCH4 1651 aa28.13■■■□□ 2.09
HMG20B-208ENST00000464304 SPATA31D1Q6ZQQ2 1576 aa28.12■■■□□ 2.09
HMG20B-208ENST00000464304 FBXO31Q5XUX0 539 aaPredicted RBP28.12■■■□□ 2.09
HMG20B-208ENST00000464304 ERVK-7P63135 1459 aa28.11■■■□□ 2.09
HMG20B-208ENST00000464304 SETD5Q9C0A6 1442 aa28.1■■■□□ 2.09
HMG20B-208ENST00000464304 ZNF142P52746 1687 aaPredicted RBP28.09■■■□□ 2.09
HMG20B-208ENST00000464304 UHRF1BP1Q6BDS2 1440 aa28.08■■■□□ 2.09
HMG20B-208ENST00000464304 TNRQ92752 1358 aa28.07■■■□□ 2.08
HMG20B-208ENST00000464304 CEP170BQ9Y4F5 1589 aaPredicted RBP28.03■■■□□ 2.08
HMG20B-208ENST00000464304 RPRD2Q5VT52 1461 aaKnown RBP28.03■■■□□ 2.08
HMG20B-208ENST00000464304 TRIM52Q96A61 297 aa28.03■■■□□ 2.08
HMG20B-208ENST00000464304 RAB3GAP2Q9H2M9 1393 aa28.02■■■□□ 2.08
HMG20B-208ENST00000464304 LTBP4Q8N2S1 1624 aa28.02■■■□□ 2.08
HMG20B-208ENST00000464304 SYNMO15061 1565 aa28.01■■■□□ 2.07
HMG20B-208ENST00000464304 SOCS7O14512 581 aa28■■■□□ 2.07
HMG20B-208ENST00000464304 SPHKAPQ2M3C7 1700 aa27.98■■■□□ 2.07
HMG20B-208ENST00000464304 NOS1P29475 1434 aa27.98■■■□□ 2.07
HMG20B-208ENST00000464304 A2ML1A8K2U0 1454 aa27.97■■■□□ 2.07
HMG20B-208ENST00000464304 NLRP1Q9C000 1473 aa27.96■■■□□ 2.07
HMG20B-208ENST00000464304 PTPRTO14522 1441 aa27.96■■■□□ 2.07
HMG20B-208ENST00000464304 TRIM26Q12899 539 aaPredicted RBP27.95■■■□□ 2.06
HMG20B-208ENST00000464304 DMRT2Q9Y5R5 561 aa27.95■■■□□ 2.06
HMG20B-208ENST00000464304 PIK3C2BO00750 1634 aa27.94■■■□□ 2.06
HMG20B-208ENST00000464304 UBR1Q8IWV7 1749 aa27.93■■■□□ 2.06
HMG20B-208ENST00000464304 MYO5BQ9ULV0 1848 aa27.9■■■□□ 2.06
HMG20B-208ENST00000464304 SLC4A1APQ9BWU0 796 aaKnown RBP27.89■■■□□ 2.06
HMG20B-208ENST00000464304 UGGT1Q9NYU2 1555 aa27.89■■■□□ 2.05
HMG20B-208ENST00000464304 ACIN1Q9UKV3 1341 aaKnown RBP27.88■■■□□ 2.05
HMG20B-208ENST00000464304 PKD2Q13563 968 aa27.86■■■□□ 2.05
HMG20B-208ENST00000464304 KDM5AP29375 1690 aaKnown RBP27.86■■■□□ 2.05
HMG20B-208ENST00000464304 MPHOSPH9Q99550 1183 aa27.84■■■□□ 2.05
HMG20B-208ENST00000464304 HRCP23327 699 aa27.83■■■□□ 2.05
HMG20B-208ENST00000464304 POLR1AO95602 1720 aaPredicted RBP27.82■■■□□ 2.04
HMG20B-208ENST00000464304 IDI1Q13907 227 aa27.82■■■□□ 2.04
HMG20B-208ENST00000464304 ADGRB3O60242 1522 aa27.82■■■□□ 2.04
HMG20B-208ENST00000464304 TRPM2O94759 1503 aa27.82■■■□□ 2.04
HMG20B-208ENST00000464304 CLTCL1P53675 1640 aa27.81■■■□□ 2.04
HMG20B-208ENST00000464304 PLA2R1Q13018 1463 aa27.8■■■□□ 2.04
HMG20B-208ENST00000464304 SLC52A1Q9NWF4 448 aa27.79■■■□□ 2.04
HMG20B-208ENST00000464304 TMEM131LA2VDJ0 1609 aa27.78■■■□□ 2.04
HMG20B-208ENST00000464304 FOXD1Q16676 465 aa27.78■■■□□ 2.04
HMG20B-208ENST00000464304 KIF1BO60333 1816 aa27.78■■■□□ 2.04
HMG20B-208ENST00000464304 IQSEC2Q5JU85 1478 aa27.76■■■□□ 2.04
HMG20B-208ENST00000464304 NCKAP5LQ9HCH0 1330 aa27.75■■■□□ 2.03
HMG20B-208ENST00000464304 THEMISQ8N1K5 641 aaPredicted RBP27.75■■■□□ 2.03
HMG20B-208ENST00000464304 ZNF335Q9H4Z2 1342 aaPredicted RBP27.73■■■□□ 2.03
HMG20B-208ENST00000464304 STAG3Q9UJ98 1225 aa27.73■■■□□ 2.03
HMG20B-208ENST00000464304 NEURL4Q96JN8 1562 aa27.71■■■□□ 2.03
HMG20B-208ENST00000464304 SLIT1O75093 1534 aa27.71■■■□□ 2.03
HMG20B-208ENST00000464304 ARHGAP23Q9P227 1491 aa27.7■■■□□ 2.03
HMG20B-208ENST00000464304 CHGAP10645 457 aaKnown RBP27.66■■■□□ 2.02
HMG20B-208ENST00000464304 TMEM2Q9UHN6 1383 aa27.65■■■□□ 2.02
HMG20B-208ENST00000464304 IQGAP1P46940 1657 aa27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms