RNA–Protein interactions for RNA: ENST00000463880.1

ARF4-202, Transcript of ADP ribosylation factor 4, humanhuman

TSL 3

Gene ARF4, Length 641 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF4-202ENST00000463880 CNTLNQ9NXG0 1405 aa31.49■■■□□ 2.63
ARF4-202ENST00000463880 PPP6R1Q9UPN7 881 aa31.49■■■□□ 2.63
ARF4-202ENST00000463880 EIF2AK4Q9P2K8 1649 aaKnown RBP31.49■■■□□ 2.63
ARF4-202ENST00000463880 CLTCQ00610 1675 aaKnown RBP31.48■■■□□ 2.63
ARF4-202ENST00000463880 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.47■■■□□ 2.63
ARF4-202ENST00000463880 WASHC2CQ9Y4E1 1318 aa31.47■■■□□ 2.63
ARF4-202ENST00000463880 ROCK1Q13464 1354 aa31.45■■■□□ 2.63
ARF4-202ENST00000463880 ZMYM3Q14202 1370 aa31.44■■■□□ 2.62
ARF4-202ENST00000463880 ANKRD50Q9ULJ7 1429 aa31.44■■■□□ 2.62
ARF4-202ENST00000463880 RNF17Q9BXT8 1623 aaKnown RBP31.42■■■□□ 2.62
ARF4-202ENST00000463880 C3P01024 1663 aa31.41■■■□□ 2.62
ARF4-202ENST00000463880 KDM5DQ9BY66 1539 aa31.39■■■□□ 2.61
ARF4-202ENST00000463880 MROH1Q8NDA8 1641 aa31.38■■■□□ 2.61
ARF4-202ENST00000463880 MROH2AA6NES4 1674 aa31.38■■■□□ 2.61
ARF4-202ENST00000463880 ABCC3O15438 1527 aa31.33■■■□□ 2.61
ARF4-202ENST00000463880 KANK1Q14678 1352 aa31.32■■■□□ 2.6
ARF4-202ENST00000463880 PRDM15P57071 1507 aaPredicted RBP31.3■■■□□ 2.6
ARF4-202ENST00000463880 FAM135AQ9P2D6 1515 aa31.3■■■□□ 2.6
ARF4-202ENST00000463880 CEP152O94986 1710 aa31.3■■■□□ 2.6
ARF4-202ENST00000463880 DEPDC5O75140 1603 aa31.3■■■□□ 2.6
ARF4-202ENST00000463880 FBXO31Q5XUX0 539 aaPredicted RBP31.29■■■□□ 2.6
ARF4-202ENST00000463880 ZC3H13Q5T200 1668 aaKnown RBP31.25■■■□□ 2.59
ARF4-202ENST00000463880 NAIPQ13075 1403 aa31.25■■■□□ 2.59
ARF4-202ENST00000463880 SETD1BQ9UPS6 1966 aaKnown RBP31.24■■■□□ 2.59
ARF4-202ENST00000463880 NPATQ14207 1427 aa31.23■■■□□ 2.59
ARF4-202ENST00000463880 PZPP20742 1482 aa31.22■■■□□ 2.59
ARF4-202ENST00000463880 LMTK3Q96Q04 1460 aa31.21■■■□□ 2.59
ARF4-202ENST00000463880 CAMSAP1Q5T5Y3 1602 aa31.21■■■□□ 2.59
ARF4-202ENST00000463880 HSPA2P54652 639 aa31.21■■■□□ 2.59
ARF4-202ENST00000463880 HFM1A2PYH4 1435 aa31.2■■■□□ 2.59
ARF4-202ENST00000463880 UHRF1BP1Q6BDS2 1440 aa31.2■■■□□ 2.59
ARF4-202ENST00000463880 PREX1Q8TCU6 1659 aa31.19■■■□□ 2.58
ARF4-202ENST00000463880 CFAP65Q6ZU64 1925 aaKnown RBP31.18■■■□□ 2.58
ARF4-202ENST00000463880 GCC2Q8IWJ2 1684 aa31.18■■■□□ 2.58
ARF4-202ENST00000463880 VWDEQ8N2E2 1590 aa31.17■■■□□ 2.58
ARF4-202ENST00000463880 UNC13BO14795 1591 aa31.17■■■□□ 2.58
ARF4-202ENST00000463880 NUP155O75694 1391 aa31.17■■■□□ 2.58
ARF4-202ENST00000463880 TNRQ92752 1358 aa31.16■■■□□ 2.58
ARF4-202ENST00000463880 LMTK2Q8IWU2 1503 aa31.13■■■□□ 2.57
ARF4-202ENST00000463880 TRIM52Q96A61 297 aa31.12■■■□□ 2.57
ARF4-202ENST00000463880 ARHGAP31Q2M1Z3 1444 aa31.1■■■□□ 2.57
ARF4-202ENST00000463880 ERVK-7P63135 1459 aa31.09■■■□□ 2.57
ARF4-202ENST00000463880 MYO3AQ8NEV4 1616 aa31.08■■■□□ 2.57
ARF4-202ENST00000463880 EFCAB6Q5THR3 1501 aa31.06■■■□□ 2.56
ARF4-202ENST00000463880 IQGAP3Q86VI3 1631 aa31.05■■■□□ 2.56
ARF4-202ENST00000463880 SPATA31D1Q6ZQQ2 1576 aa31.05■■■□□ 2.56
ARF4-202ENST00000463880 TET3O43151 1660 aa31.04■■■□□ 2.56
ARF4-202ENST00000463880 CEP170BQ9Y4F5 1589 aaPredicted RBP31.01■■■□□ 2.56
ARF4-202ENST00000463880 SETD5Q9C0A6 1442 aa31.01■■■□□ 2.55
ARF4-202ENST00000463880 A2ML1A8K2U0 1454 aa30.99■■■□□ 2.55
ARF4-202ENST00000463880 NLRP1Q9C000 1473 aa30.96■■■□□ 2.55
ARF4-202ENST00000463880 ZNF142P52746 1687 aaPredicted RBP30.96■■■□□ 2.55
ARF4-202ENST00000463880 E9PCH4 1651 aa30.95■■■□□ 2.55
ARF4-202ENST00000463880 RPRD2Q5VT52 1461 aaKnown RBP30.95■■■□□ 2.54
ARF4-202ENST00000463880 NOS1P29475 1434 aa30.93■■■□□ 2.54
ARF4-202ENST00000463880 RAB3GAP2Q9H2M9 1393 aa30.92■■■□□ 2.54
ARF4-202ENST00000463880 SLC4A1APQ9BWU0 796 aaKnown RBP30.92■■■□□ 2.54
ARF4-202ENST00000463880 SYNMO15061 1565 aa30.9■■■□□ 2.54
ARF4-202ENST00000463880 UGGT1Q9NYU2 1555 aa30.9■■■□□ 2.54
ARF4-202ENST00000463880 IDI1Q13907 227 aa30.89■■■□□ 2.54
ARF4-202ENST00000463880 STAG3Q9UJ98 1225 aa30.89■■■□□ 2.54
ARF4-202ENST00000463880 PKD2Q13563 968 aa30.88■■■□□ 2.53
ARF4-202ENST00000463880 THEMISQ8N1K5 641 aaPredicted RBP30.87■■■□□ 2.53
ARF4-202ENST00000463880 NCKAP5LQ9HCH0 1330 aa30.86■■■□□ 2.53
ARF4-202ENST00000463880 SLC52A1Q9NWF4 448 aa30.84■■■□□ 2.53
ARF4-202ENST00000463880 STRCQ7RTU9 1775 aa30.83■■■□□ 2.53
ARF4-202ENST00000463880 PIK3C2BO00750 1634 aa30.83■■■□□ 2.53
ARF4-202ENST00000463880 MPHOSPH9Q99550 1183 aa30.82■■■□□ 2.52
ARF4-202ENST00000463880 CHGAP10645 457 aaKnown RBP30.81■■■□□ 2.52
ARF4-202ENST00000463880 FOXD1Q16676 465 aa30.81■■■□□ 2.52
ARF4-202ENST00000463880 UBR1Q8IWV7 1749 aa30.79■■■□□ 2.52
ARF4-202ENST00000463880 PLA2R1Q13018 1463 aa30.79■■■□□ 2.52
ARF4-202ENST00000463880 TRIM26Q12899 539 aaPredicted RBP30.78■■■□□ 2.52
ARF4-202ENST00000463880 ACIN1Q9UKV3 1341 aaKnown RBP30.76■■■□□ 2.52
ARF4-202ENST00000463880 ANKLE2Q86XL3 938 aa30.76■■■□□ 2.51
ARF4-202ENST00000463880 DMRT2Q9Y5R5 561 aa30.75■■■□□ 2.51
ARF4-202ENST00000463880 SPHKAPQ2M3C7 1700 aa30.75■■■□□ 2.51
ARF4-202ENST00000463880 PTPRTO14522 1441 aa30.73■■■□□ 2.51
ARF4-202ENST00000463880 ADGRB3O60242 1522 aa30.71■■■□□ 2.51
ARF4-202ENST00000463880 HRCP23327 699 aa30.7■■■□□ 2.51
ARF4-202ENST00000463880 TXNDC2Q86VQ3 553 aa30.68■■■□□ 2.5
ARF4-202ENST00000463880 TMEM2Q9UHN6 1383 aa30.66■■■□□ 2.5
ARF4-202ENST00000463880 LTKP29376 864 aa30.66■■■□□ 2.5
ARF4-202ENST00000463880 EID1Q9Y6B2 187 aa30.66■■■□□ 2.5
ARF4-202ENST00000463880 TRPM2O94759 1503 aa30.66■■■□□ 2.5
ARF4-202ENST00000463880 POLR1AO95602 1720 aaPredicted RBP30.65■■■□□ 2.5
ARF4-202ENST00000463880 MYO5BQ9ULV0 1848 aa30.65■■■□□ 2.5
ARF4-202ENST00000463880 ARHGAP23Q9P227 1491 aa30.63■■■□□ 2.49
ARF4-202ENST00000463880 SLIT1O75093 1534 aa30.63■■■□□ 2.49
ARF4-202ENST00000463880 TMEM131LA2VDJ0 1609 aa30.63■■■□□ 2.49
ARF4-202ENST00000463880 CLTCL1P53675 1640 aa30.63■■■□□ 2.49
ARF4-202ENST00000463880 KDM5AP29375 1690 aaKnown RBP30.63■■■□□ 2.49
ARF4-202ENST00000463880 NEURL4Q96JN8 1562 aa30.62■■■□□ 2.49
ARF4-202ENST00000463880 SENP3Q9H4L4 574 aaPredicted RBP30.62■■■□□ 2.49
ARF4-202ENST00000463880 SCAF11Q99590 1463 aaKnown RBP30.61■■■□□ 2.49
ARF4-202ENST00000463880 NPHP4O75161 1426 aaPredicted RBP30.6■■■□□ 2.49
ARF4-202ENST00000463880 ZNF326Q5BKZ1 582 aaKnown RBP30.6■■■□□ 2.49
ARF4-202ENST00000463880 NUTM2DQ5VT03 806 aaPredicted RBP30.59■■■□□ 2.49
ARF4-202ENST00000463880 RIMS2Q9UQ26 1411 aa30.56■■■□□ 2.48
ARF4-202ENST00000463880 PPP1R15AO75807 674 aaPredicted RBP30.55■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms