RNA–Protein interactions for RNA: ENST00000463784.5

IRF1-207, Transcript of interferon regulatory factor 1, humanhuman

TSL 3

Gene IRF1, Length 520 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-207ENST00000463784 ADGRL2O95490 1459 aa31.08■■■□□ 2.57
IRF1-207ENST00000463784 RRBP1Q9P2E9 1410 aaKnown RBP31.07■■■□□ 2.56
IRF1-207ENST00000463784 ITGAEP38570 1179 aa31.06■■■□□ 2.56
IRF1-207ENST00000463784 EIF2AK4Q9P2K8 1649 aaKnown RBP31.06■■■□□ 2.56
IRF1-207ENST00000463784 FAM135AQ9P2D6 1515 aa31.04■■■□□ 2.56
IRF1-207ENST00000463784 MROH2AA6NES4 1674 aa31.03■■■□□ 2.56
IRF1-207ENST00000463784 PTPRKQ15262 1439 aa31.01■■■□□ 2.55
IRF1-207ENST00000463784 CLTCQ00610 1675 aaKnown RBP31■■■□□ 2.55
IRF1-207ENST00000463784 ROCK1Q13464 1354 aa31■■■□□ 2.55
IRF1-207ENST00000463784 C3P01024 1663 aa31■■■□□ 2.55
IRF1-207ENST00000463784 KDM5DQ9BY66 1539 aa30.99■■■□□ 2.55
IRF1-207ENST00000463784 RNF17Q9BXT8 1623 aaKnown RBP30.98■■■□□ 2.55
IRF1-207ENST00000463784 NPATQ14207 1427 aa30.97■■■□□ 2.55
IRF1-207ENST00000463784 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.95■■■□□ 2.55
IRF1-207ENST00000463784 ANKRD50Q9ULJ7 1429 aa30.95■■■□□ 2.54
IRF1-207ENST00000463784 KANK1Q14678 1352 aa30.94■■■□□ 2.54
IRF1-207ENST00000463784 LMTK3Q96Q04 1460 aa30.94■■■□□ 2.54
IRF1-207ENST00000463784 UHRF1BP1Q6BDS2 1440 aa30.93■■■□□ 2.54
IRF1-207ENST00000463784 SETD1BQ9UPS6 1966 aaKnown RBP30.9■■■□□ 2.54
IRF1-207ENST00000463784 PREX1Q8TCU6 1659 aa30.87■■■□□ 2.53
IRF1-207ENST00000463784 ABCC3O15438 1527 aa30.87■■■□□ 2.53
IRF1-207ENST00000463784 PZPP20742 1482 aa30.86■■■□□ 2.53
IRF1-207ENST00000463784 PRDM15P57071 1507 aaPredicted RBP30.86■■■□□ 2.53
IRF1-207ENST00000463784 MROH1Q8NDA8 1641 aa30.86■■■□□ 2.53
IRF1-207ENST00000463784 ZC3H13Q5T200 1668 aaKnown RBP30.86■■■□□ 2.53
IRF1-207ENST00000463784 HSPA2P54652 639 aa30.85■■■□□ 2.53
IRF1-207ENST00000463784 FBXO31Q5XUX0 539 aaPredicted RBP30.83■■■□□ 2.53
IRF1-207ENST00000463784 DEPDC5O75140 1603 aa30.81■■■□□ 2.52
IRF1-207ENST00000463784 TNRQ92752 1358 aa30.79■■■□□ 2.52
IRF1-207ENST00000463784 ARHGAP31Q2M1Z3 1444 aa30.75■■■□□ 2.51
IRF1-207ENST00000463784 LMTK2Q8IWU2 1503 aa30.73■■■□□ 2.51
IRF1-207ENST00000463784 CEP152O94986 1710 aa30.73■■■□□ 2.51
IRF1-207ENST00000463784 CAMSAP1Q5T5Y3 1602 aa30.73■■■□□ 2.51
IRF1-207ENST00000463784 VWDEQ8N2E2 1590 aa30.71■■■□□ 2.51
IRF1-207ENST00000463784 MYO3AQ8NEV4 1616 aa30.68■■■□□ 2.5
IRF1-207ENST00000463784 NAIPQ13075 1403 aa30.67■■■□□ 2.5
IRF1-207ENST00000463784 ERVK-7P63135 1459 aa30.67■■■□□ 2.5
IRF1-207ENST00000463784 NUP155O75694 1391 aa30.66■■■□□ 2.5
IRF1-207ENST00000463784 A2ML1A8K2U0 1454 aa30.66■■■□□ 2.5
IRF1-207ENST00000463784 NLRP1Q9C000 1473 aa30.66■■■□□ 2.5
IRF1-207ENST00000463784 UNC13BO14795 1591 aa30.66■■■□□ 2.5
IRF1-207ENST00000463784 SPATA31D1Q6ZQQ2 1576 aa30.66■■■□□ 2.5
IRF1-207ENST00000463784 HFM1A2PYH4 1435 aa30.65■■■□□ 2.5
IRF1-207ENST00000463784 DMRT2Q9Y5R5 561 aa30.65■■■□□ 2.5
IRF1-207ENST00000463784 CEP170BQ9Y4F5 1589 aaPredicted RBP30.65■■■□□ 2.5
IRF1-207ENST00000463784 THEMISQ8N1K5 641 aaPredicted RBP30.61■■■□□ 2.49
IRF1-207ENST00000463784 ZNF142P52746 1687 aaPredicted RBP30.6■■■□□ 2.49
IRF1-207ENST00000463784 EFCAB6Q5THR3 1501 aa30.59■■■□□ 2.49
IRF1-207ENST00000463784 RPRD2Q5VT52 1461 aaKnown RBP30.58■■■□□ 2.49
IRF1-207ENST00000463784 GCC2Q8IWJ2 1684 aa30.56■■■□□ 2.48
IRF1-207ENST00000463784 PKD2Q13563 968 aa30.55■■■□□ 2.48
IRF1-207ENST00000463784 TET3O43151 1660 aa30.55■■■□□ 2.48
IRF1-207ENST00000463784 TRIM52Q96A61 297 aa30.54■■■□□ 2.48
IRF1-207ENST00000463784 PLA2R1Q13018 1463 aa30.54■■■□□ 2.48
IRF1-207ENST00000463784 IQGAP3Q86VI3 1631 aa30.54■■■□□ 2.48
IRF1-207ENST00000463784 UGGT1Q9NYU2 1555 aa30.53■■■□□ 2.48
IRF1-207ENST00000463784 SLC52A1Q9NWF4 448 aa30.52■■■□□ 2.48
IRF1-207ENST00000463784 NOS1P29475 1434 aa30.51■■■□□ 2.47
IRF1-207ENST00000463784 STAG3Q9UJ98 1225 aa30.51■■■□□ 2.47
IRF1-207ENST00000463784 CFAP65Q6ZU64 1925 aaKnown RBP30.51■■■□□ 2.47
IRF1-207ENST00000463784 NCKAP5LQ9HCH0 1330 aa30.49■■■□□ 2.47
IRF1-207ENST00000463784 ACIN1Q9UKV3 1341 aaKnown RBP30.49■■■□□ 2.47
IRF1-207ENST00000463784 ANKLE2Q86XL3 938 aa30.48■■■□□ 2.47
IRF1-207ENST00000463784 IDI1Q13907 227 aa30.47■■■□□ 2.47
IRF1-207ENST00000463784 PTPRTO14522 1441 aa30.47■■■□□ 2.47
IRF1-207ENST00000463784 STRCQ7RTU9 1775 aa30.46■■■□□ 2.47
IRF1-207ENST00000463784 SETD5Q9C0A6 1442 aa30.41■■■□□ 2.46
IRF1-207ENST00000463784 SLC4A1APQ9BWU0 796 aaKnown RBP30.4■■■□□ 2.46
IRF1-207ENST00000463784 SYNMO15061 1565 aa30.4■■■□□ 2.46
IRF1-207ENST00000463784 E9PCH4 1651 aa30.39■■■□□ 2.46
IRF1-207ENST00000463784 EID1Q9Y6B2 187 aa30.36■■■□□ 2.45
IRF1-207ENST00000463784 PIK3C2BO00750 1634 aa30.35■■■□□ 2.45
IRF1-207ENST00000463784 UBR1Q8IWV7 1749 aa30.34■■■□□ 2.45
IRF1-207ENST00000463784 TXNDC2Q86VQ3 553 aa30.32■■■□□ 2.44
IRF1-207ENST00000463784 TMEM2Q9UHN6 1383 aa30.31■■■□□ 2.44
IRF1-207ENST00000463784 CHGAP10645 457 aaKnown RBP30.31■■■□□ 2.44
IRF1-207ENST00000463784 KDM5AP29375 1690 aaKnown RBP30.3■■■□□ 2.44
IRF1-207ENST00000463784 HDGFP51858 240 aaKnown RBP30.29■■■□□ 2.44
IRF1-207ENST00000463784 ADGRB3O60242 1522 aa30.28■■■□□ 2.44
IRF1-207ENST00000463784 SLIT1O75093 1534 aa30.28■■■□□ 2.44
IRF1-207ENST00000463784 ARHGAP23Q9P227 1491 aa30.28■■■□□ 2.44
IRF1-207ENST00000463784 MPHOSPH9Q99550 1183 aa30.28■■■□□ 2.44
IRF1-207ENST00000463784 RAB3GAP2Q9H2M9 1393 aa30.28■■■□□ 2.44
IRF1-207ENST00000463784 NPHP4O75161 1426 aaPredicted RBP30.27■■■□□ 2.44
IRF1-207ENST00000463784 MED14O60244 1454 aa30.26■■■□□ 2.44
IRF1-207ENST00000463784 SCAF11Q99590 1463 aaKnown RBP30.25■■■□□ 2.43
IRF1-207ENST00000463784 POLR1AO95602 1720 aaPredicted RBP30.25■■■□□ 2.43
IRF1-207ENST00000463784 HRCP23327 699 aa30.25■■■□□ 2.43
IRF1-207ENST00000463784 LTKP29376 864 aa30.25■■■□□ 2.43
IRF1-207ENST00000463784 NEURL4Q96JN8 1562 aa30.23■■■□□ 2.43
IRF1-207ENST00000463784 SPHKAPQ2M3C7 1700 aa30.2■■■□□ 2.43
IRF1-207ENST00000463784 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.19■■■□□ 2.42
IRF1-207ENST00000463784 CERKQ8TCT0 537 aa30.19■■■□□ 2.42
IRF1-207ENST00000463784 TRPM2O94759 1503 aa30.17■■■□□ 2.42
IRF1-207ENST00000463784 TMEM131LA2VDJ0 1609 aa30.17■■■□□ 2.42
IRF1-207ENST00000463784 PPP1R15AO75807 674 aaPredicted RBP30.16■■■□□ 2.42
IRF1-207ENST00000463784 ZNF335Q9H4Z2 1342 aaPredicted RBP30.16■■■□□ 2.42
IRF1-207ENST00000463784 FOXD1Q16676 465 aa30.15■■■□□ 2.42
IRF1-207ENST00000463784 RIMS2Q9UQ26 1411 aa30.14■■■□□ 2.42
IRF1-207ENST00000463784 BCANQ96GW7 911 aa30.14■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms