RNA–Protein interactions for RNA: ENST00000463621.3

CLASP1-209, Transcript of cytoplasmic linker associated protein 1, humanhuman

TSL 4

Gene CLASP1, Length 536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP1-209ENST00000463621 CPS1P31327 1500 aa8.94□□□□□ -0.98
CLASP1-209ENST00000463621 NEURL4Q96JN8 1562 aa8.94□□□□□ -0.98
CLASP1-209ENST00000463621 DNMT1P26358 1616 aaKnown RBP8.94□□□□□ -0.98
CLASP1-209ENST00000463621 FBXO31Q5XUX0 539 aaPredicted RBP8.93□□□□□ -0.98
CLASP1-209ENST00000463621 A2ML1A8K2U0 1454 aa8.93□□□□□ -0.98
CLASP1-209ENST00000463621 CDC42BPAQ5VT25 1732 aa8.93□□□□□ -0.98
CLASP1-209ENST00000463621 SYCP2Q9BX26 1530 aa8.92□□□□□ -0.98
CLASP1-209ENST00000463621 EEA1Q15075 1411 aa8.92□□□□□ -0.98
CLASP1-209ENST00000463621 POLR1AO95602 1720 aaPredicted RBP8.91□□□□□ -0.98
CLASP1-209ENST00000463621 VWDEQ8N2E2 1590 aa8.91□□□□□ -0.98
CLASP1-209ENST00000463621 TULP1O00294 542 aaPredicted RBP8.91□□□□□ -0.98
CLASP1-209ENST00000463621 PLXNC1O60486 1568 aa8.9□□□□□ -0.98
CLASP1-209ENST00000463621 ATP7AQ04656 1500 aa8.9□□□□□ -0.98
CLASP1-209ENST00000463621 A2MP01023 1474 aa8.9□□□□□ -0.98
CLASP1-209ENST00000463621 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.9□□□□□ -0.98
CLASP1-209ENST00000463621 POTEAQ6S8J7 498 aa8.9□□□□□ -0.98
CLASP1-209ENST00000463621 ANKLE2Q86XL3 938 aa8.89□□□□□ -0.99
CLASP1-209ENST00000463621 STRCP1A6NGW2 1772 aa8.89□□□□□ -0.99
CLASP1-209ENST00000463621 INO80Q9ULG1 1556 aaPredicted RBP8.88□□□□□ -0.99
CLASP1-209ENST00000463621 TNRQ92752 1358 aa8.87□□□□□ -0.99
CLASP1-209ENST00000463621 GPATCH8Q9UKJ3 1502 aaKnown RBP8.87□□□□□ -0.99
CLASP1-209ENST00000463621 NPHP4O75161 1426 aaPredicted RBP8.87□□□□□ -0.99
CLASP1-209ENST00000463621 LRRC7Q96NW7 1537 aa8.86□□□□□ -0.99
CLASP1-209ENST00000463621 THEMISQ8N1K5 641 aaPredicted RBP8.86□□□□□ -0.99
CLASP1-209ENST00000463621 ZNF644Q9H582 1327 aaPredicted RBP8.85□□□□□ -0.99
CLASP1-209ENST00000463621 CFDP1Q9UEE9 299 aaPredicted RBP8.85□□□□□ -0.99
CLASP1-209ENST00000463621 MED14O60244 1454 aa8.84□□□□□ -0.99
CLASP1-209ENST00000463621 CCDC18Q5T9S5 1454 aa8.84□□□□□ -0.99
CLASP1-209ENST00000463621 SETD1AO15047 1707 aaKnown RBP8.84□□□□□ -0.99
CLASP1-209ENST00000463621 KIF3BO15066 747 aa8.84□□□□□ -0.99
CLASP1-209ENST00000463621 CASKIN1Q8WXD9 1431 aa8.84□□□□□ -0.99
CLASP1-209ENST00000463621 KIAA1107Q9UPP5 1409 aa8.84□□□□□ -0.99
CLASP1-209ENST00000463621 ADGBQ8N7X0 1667 aa8.84□□□□□ -0.99
CLASP1-209ENST00000463621 SRCAPQ6ZRS2 3230 aa8.83□□□□□ -1
CLASP1-209ENST00000463621 UGGT1Q9NYU2 1555 aa8.83□□□□□ -1
CLASP1-209ENST00000463621 MIA2Q96PC5 1412 aa8.83□□□□□ -1
CLASP1-209ENST00000463621 TPRNQ4KMQ1 711 aa8.83□□□□□ -1
CLASP1-209ENST00000463621 IQGAP1P46940 1657 aa8.83□□□□□ -1
CLASP1-209ENST00000463621 DEPDC5O75140 1603 aa8.83□□□□□ -1
CLASP1-209ENST00000463621 RNF17Q9BXT8 1623 aaKnown RBP8.83□□□□□ -1
CLASP1-209ENST00000463621 PZPP20742 1482 aa8.83□□□□□ -1
CLASP1-209ENST00000463621 WASHC2CQ9Y4E1 1318 aa8.82□□□□□ -1
CLASP1-209ENST00000463621 FAM135AQ9P2D6 1515 aa8.81□□□□□ -1
CLASP1-209ENST00000463621 DHX29Q7Z478 1369 aaKnown RBP8.81□□□□□ -1
CLASP1-209ENST00000463621 CCNB3Q8WWL7 1395 aa8.81□□□□□ -1
CLASP1-209ENST00000463621 PLEKHH2Q8IVE3 1493 aa8.81□□□□□ -1
CLASP1-209ENST00000463621 NLRP1Q9C000 1473 aa8.8□□□□□ -1
CLASP1-209ENST00000463621 KDM5DQ9BY66 1539 aa8.8□□□□□ -1
CLASP1-209ENST00000463621 MBD5Q9P267 1494 aa8.79□□□□□ -1
CLASP1-209ENST00000463621 XIRP1Q702N8 1843 aaKnown RBP8.79□□□□□ -1
CLASP1-209ENST00000463621 SYNMO15061 1565 aa8.78□□□□□ -1
CLASP1-209ENST00000463621 LTKP29376 864 aa8.78□□□□□ -1
CLASP1-209ENST00000463621 RBM33Q96EV2 1170 aaKnown RBP8.78□□□□□ -1
CLASP1-209ENST00000463621 ZC3H13Q5T200 1668 aaKnown RBP8.78□□□□□ -1
CLASP1-209ENST00000463621 FYCO1Q9BQS8 1478 aa8.77□□□□□ -1
CLASP1-209ENST00000463621 PLCB2Q00722 1185 aa8.77□□□□□ -1.01
CLASP1-209ENST00000463621 RTEL1-TNFRSF6BF6WH68 1400 aa8.77□□□□□ -1.01
CLASP1-209ENST00000463621 FAM135BQ49AJ0 1406 aa8.77□□□□□ -1.01
CLASP1-209ENST00000463621 UPF1Q92900 1129 aaKnown RBP eCLIP8.76□□□□□ -1.01
CLASP1-209ENST00000463621 TXNDC2Q86VQ3 553 aa8.75□□□□□ -1.01
CLASP1-209ENST00000463621 CFAP65Q6ZU64 1925 aaKnown RBP8.75□□□□□ -1.01
CLASP1-209ENST00000463621 ROBO1Q9Y6N7 1651 aa8.75□□□□□ -1.01
CLASP1-209ENST00000463621 MTUS2Q5JR59 1369 aa8.74□□□□□ -1.01
CLASP1-209ENST00000463621 TIAM1Q13009 1591 aa8.74□□□□□ -1.01
CLASP1-209ENST00000463621 TRIM52Q96A61 297 aa8.74□□□□□ -1.01
CLASP1-209ENST00000463621 SCAF11Q99590 1463 aaKnown RBP8.74□□□□□ -1.01
CLASP1-209ENST00000463621 TMEM94Q12767 1356 aa8.73□□□□□ -1.01
CLASP1-209ENST00000463621 NCOA2Q15596 1464 aa8.73□□□□□ -1.01
CLASP1-209ENST00000463621 UBR1Q8IWV7 1749 aa8.73□□□□□ -1.01
CLASP1-209ENST00000463621 ERVK-7P63135 1459 aa8.72□□□□□ -1.01
CLASP1-209ENST00000463621 ABCC3O15438 1527 aa8.72□□□□□ -1.01
CLASP1-209ENST00000463621 CCDC141Q6ZP82 1450 aa8.71□□□□□ -1.01
CLASP1-209ENST00000463621 HAP1P54257 671 aaPredicted RBP8.71□□□□□ -1.02
CLASP1-209ENST00000463621 PROSER2Q86WR7 435 aaPredicted RBP8.71□□□□□ -1.02
CLASP1-209ENST00000463621 GTF3C3Q9Y5Q9 886 aa8.71□□□□□ -1.02
CLASP1-209ENST00000463621 SLC26A8Q96RN1 970 aa8.7□□□□□ -1.02
CLASP1-209ENST00000463621 ARHGAP23Q9P227 1491 aa8.7□□□□□ -1.02
CLASP1-209ENST00000463621 MAP3K1Q13233 1512 aa8.7□□□□□ -1.02
CLASP1-209ENST00000463621 PHLPP1O60346 1717 aa8.69□□□□□ -1.02
CLASP1-209ENST00000463621 EID1Q9Y6B2 187 aa8.69□□□□□ -1.02
CLASP1-209ENST00000463621 JCADQ9P266 1359 aa8.69□□□□□ -1.02
CLASP1-209ENST00000463621 CAMSAP2Q08AD1 1489 aa8.69□□□□□ -1.02
CLASP1-209ENST00000463621 SLIT1O75093 1534 aa8.69□□□□□ -1.02
CLASP1-209ENST00000463621 LRP6O75581 1613 aa8.69□□□□□ -1.02
CLASP1-209ENST00000463621 KCNA6P17658 529 aa8.68□□□□□ -1.02
CLASP1-209ENST00000463621 PODXL2Q9NZ53 605 aa8.68□□□□□ -1.02
CLASP1-209ENST00000463621 SLAIN2Q9P270 581 aa8.68□□□□□ -1.02
CLASP1-209ENST00000463621 CEP152O94986 1710 aa8.68□□□□□ -1.02
CLASP1-209ENST00000463621 TSPY4P0CV99 314 aa8.67□□□□□ -1.02
CLASP1-209ENST00000463621 TSPY10P0CW01 314 aa8.67□□□□□ -1.02
CLASP1-209ENST00000463621 MEX3CQ5U5Q3 659 aaKnown RBP8.67□□□□□ -1.02
CLASP1-209ENST00000463621 MROH1Q8NDA8 1641 aa8.67□□□□□ -1.02
CLASP1-209ENST00000463621 CEP162Q5TB80 1403 aa8.66□□□□□ -1.02
CLASP1-209ENST00000463621 TMEM2Q9UHN6 1383 aa8.66□□□□□ -1.02
CLASP1-209ENST00000463621 RSPH4AQ5TD94 716 aa8.66□□□□□ -1.02
CLASP1-209ENST00000463621 ZNF772Q68DY9 489 aaPredicted RBP8.66□□□□□ -1.02
CLASP1-209ENST00000463621 PIK3C2BO00750 1634 aa8.65□□□□□ -1.02
CLASP1-209ENST00000463621 EHBP1L1Q8N3D4 1523 aa8.65□□□□□ -1.02
CLASP1-209ENST00000463621 RXRBP28702 533 aa8.65□□□□□ -1.02
CLASP1-209ENST00000463621 STAG3Q9UJ98 1225 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms