RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 MYO3AQ8NEV4 1616 aa32.25■■■□□ 2.75
PDLIM4-205ENST00000463615 CERKQ8TCT0 537 aa32.22■■■□□ 2.75
PDLIM4-205ENST00000463615 CAMSAP1Q5T5Y3 1602 aa32.21■■■□□ 2.75
PDLIM4-205ENST00000463615 CEP170BQ9Y4F5 1589 aaPredicted RBP32.2■■■□□ 2.75
PDLIM4-205ENST00000463615 RNF17Q9BXT8 1623 aaKnown RBP32.2■■■□□ 2.75
PDLIM4-205ENST00000463615 PZPP20742 1482 aa32.2■■■□□ 2.75
PDLIM4-205ENST00000463615 SHANK2Q9UPX8 1470 aa32.2■■■□□ 2.75
PDLIM4-205ENST00000463615 EIF2AK4Q9P2K8 1649 aaKnown RBP32.19■■■□□ 2.74
PDLIM4-205ENST00000463615 PLA2R1Q13018 1463 aa32.19■■■□□ 2.74
PDLIM4-205ENST00000463615 WASHC2CQ9Y4E1 1318 aa32.18■■■□□ 2.74
PDLIM4-205ENST00000463615 PTPN23Q9H3S7 1636 aa32.18■■■□□ 2.74
PDLIM4-205ENST00000463615 TCOF1Q13428 1488 aaKnown RBP32.17■■■□□ 2.74
PDLIM4-205ENST00000463615 ABCC5O15440 1437 aa32.16■■■□□ 2.74
PDLIM4-205ENST00000463615 FGD6Q6ZV73 1430 aa32.16■■■□□ 2.74
PDLIM4-205ENST00000463615 A2ML1A8K2U0 1454 aa32.15■■■□□ 2.74
PDLIM4-205ENST00000463615 DUOX2Q9NRD8 1548 aa32.14■■■□□ 2.74
PDLIM4-205ENST00000463615 CROCC2H7BZ55 1655 aa32.12■■■□□ 2.73
PDLIM4-205ENST00000463615 TNRQ92752 1358 aa32.1■■■□□ 2.73
PDLIM4-205ENST00000463615 PKD2Q13563 968 aa32.1■■■□□ 2.73
PDLIM4-205ENST00000463615 ZC3H13Q5T200 1668 aaKnown RBP32.1■■■□□ 2.73
PDLIM4-205ENST00000463615 DNMT1P26358 1616 aaKnown RBP32.09■■■□□ 2.73
PDLIM4-205ENST00000463615 FBXO31Q5XUX0 539 aaPredicted RBP32.09■■■□□ 2.73
PDLIM4-205ENST00000463615 DAPK1P53355 1430 aa32.09■■■□□ 2.73
PDLIM4-205ENST00000463615 MROH1Q8NDA8 1641 aa32.08■■■□□ 2.73
PDLIM4-205ENST00000463615 ABCC3O15438 1527 aa32.08■■■□□ 2.73
PDLIM4-205ENST00000463615 KIF15Q9NS87 1388 aa32.06■■■□□ 2.72
PDLIM4-205ENST00000463615 ERBINQ96RT1 1412 aa32.05■■■□□ 2.72
PDLIM4-205ENST00000463615 LTBP4Q8N2S1 1624 aa32.04■■■□□ 2.72
PDLIM4-205ENST00000463615 NCKAP5LQ9HCH0 1330 aa32.03■■■□□ 2.72
PDLIM4-205ENST00000463615 NLRP1Q9C000 1473 aa32.03■■■□□ 2.72
PDLIM4-205ENST00000463615 SPATA31D1Q6ZQQ2 1576 aa31.99■■■□□ 2.71
PDLIM4-205ENST00000463615 PRDM15P57071 1507 aaPredicted RBP31.99■■■□□ 2.71
PDLIM4-205ENST00000463615 IQSEC2Q5JU85 1478 aa31.97■■■□□ 2.71
PDLIM4-205ENST00000463615 RRP7BPQ9NSQ0 103 aa31.95■■■□□ 2.71
PDLIM4-205ENST00000463615 ANKRD30AQ9BXX3 1397 aa31.94■■■□□ 2.7
PDLIM4-205ENST00000463615 DEPDC5O75140 1603 aa31.93■■■□□ 2.7
PDLIM4-205ENST00000463615 ARHGAP31Q2M1Z3 1444 aa31.93■■■□□ 2.7
PDLIM4-205ENST00000463615 ERVK-7P63135 1459 aa31.93■■■□□ 2.7
PDLIM4-205ENST00000463615 ADGRL2O95490 1459 aa31.91■■■□□ 2.7
PDLIM4-205ENST00000463615 THEMISQ8N1K5 641 aaPredicted RBP31.91■■■□□ 2.7
PDLIM4-205ENST00000463615 CEP152O94986 1710 aa31.91■■■□□ 2.7
PDLIM4-205ENST00000463615 UGGT1Q9NYU2 1555 aa31.9■■■□□ 2.7
PDLIM4-205ENST00000463615 POLR1AO95602 1720 aaPredicted RBP31.87■■■□□ 2.69
PDLIM4-205ENST00000463615 NEURL4Q96JN8 1562 aa31.87■■■□□ 2.69
PDLIM4-205ENST00000463615 ZNF335Q9H4Z2 1342 aaPredicted RBP31.85■■■□□ 2.69
PDLIM4-205ENST00000463615 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.84■■■□□ 2.69
PDLIM4-205ENST00000463615 CHIC2Q9UKJ5 165 aa31.84■■■□□ 2.69
PDLIM4-205ENST00000463615 VWDEQ8N2E2 1590 aa31.83■■■□□ 2.69
PDLIM4-205ENST00000463615 ANKLE2Q86XL3 938 aa31.83■■■□□ 2.69
PDLIM4-205ENST00000463615 LMTK2Q8IWU2 1503 aa31.83■■■□□ 2.69
PDLIM4-205ENST00000463615 MED14O60244 1454 aa31.83■■■□□ 2.69
PDLIM4-205ENST00000463615 KANK1Q14678 1352 aa31.81■■■□□ 2.68
PDLIM4-205ENST00000463615 FAM50AQ14320 339 aaKnown RBP31.8■■■□□ 2.68
PDLIM4-205ENST00000463615 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.75■■■□□ 2.67
PDLIM4-205ENST00000463615 NPHP4O75161 1426 aaPredicted RBP31.73■■■□□ 2.67
PDLIM4-205ENST00000463615 UBR1Q8IWV7 1749 aa31.72■■■□□ 2.67
PDLIM4-205ENST00000463615 ANKRD50Q9ULJ7 1429 aa31.72■■■□□ 2.67
PDLIM4-205ENST00000463615 CFAP65Q6ZU64 1925 aaKnown RBP31.71■■■□□ 2.67
PDLIM4-205ENST00000463615 CPS1P31327 1500 aa31.69■■■□□ 2.66
PDLIM4-205ENST00000463615 ARHGAP23Q9P227 1491 aa31.68■■■□□ 2.66
PDLIM4-205ENST00000463615 ROCK1Q13464 1354 aa31.68■■■□□ 2.66
PDLIM4-205ENST00000463615 SLIT1O75093 1534 aa31.67■■■□□ 2.66
PDLIM4-205ENST00000463615 EFCAB6Q5THR3 1501 aa31.67■■■□□ 2.66
PDLIM4-205ENST00000463615 IQGAP1P46940 1657 aa31.65■■■□□ 2.66
PDLIM4-205ENST00000463615 NOS1P29475 1434 aa31.65■■■□□ 2.66
PDLIM4-205ENST00000463615 KDM5AP29375 1690 aaKnown RBP31.64■■■□□ 2.65
PDLIM4-205ENST00000463615 RPRD2Q5VT52 1461 aaKnown RBP31.61■■■□□ 2.65
PDLIM4-205ENST00000463615 SCAF11Q99590 1463 aaKnown RBP31.61■■■□□ 2.65
PDLIM4-205ENST00000463615 PIK3C2BO00750 1634 aa31.6■■■□□ 2.65
PDLIM4-205ENST00000463615 SYNMO15061 1565 aa31.59■■■□□ 2.65
PDLIM4-205ENST00000463615 UNC13BO14795 1591 aa31.57■■■□□ 2.64
PDLIM4-205ENST00000463615 IDI1Q13907 227 aa31.56■■■□□ 2.64
PDLIM4-205ENST00000463615 TMEM2Q9UHN6 1383 aa31.56■■■□□ 2.64
PDLIM4-205ENST00000463615 UBAP1LF5GYI3 381 aa31.55■■■□□ 2.64
PDLIM4-205ENST00000463615 LTKP29376 864 aa31.55■■■□□ 2.64
PDLIM4-205ENST00000463615 TET3O43151 1660 aa31.54■■■□□ 2.64
PDLIM4-205ENST00000463615 SLC52A1Q9NWF4 448 aa31.54■■■□□ 2.64
PDLIM4-205ENST00000463615 TXNDC2Q86VQ3 553 aa31.53■■■□□ 2.64
PDLIM4-205ENST00000463615 EID1Q9Y6B2 187 aa31.5■■■□□ 2.63
PDLIM4-205ENST00000463615 ADGRB3O60242 1522 aa31.48■■■□□ 2.63
PDLIM4-205ENST00000463615 GCC2Q8IWJ2 1684 aa31.48■■■□□ 2.63
PDLIM4-205ENST00000463615 STAG3Q9UJ98 1225 aa31.47■■■□□ 2.63
PDLIM4-205ENST00000463615 STRCP1A6NGW2 1772 aa31.45■■■□□ 2.63
PDLIM4-205ENST00000463615 RRBP1Q9P2E9 1410 aaKnown RBP31.45■■■□□ 2.63
PDLIM4-205ENST00000463615 PPARGC1BQ86YN6 1023 aaKnown RBP31.44■■■□□ 2.62
PDLIM4-205ENST00000463615 IQGAP3Q86VI3 1631 aa31.43■■■□□ 2.62
PDLIM4-205ENST00000463615 LRRC7Q96NW7 1537 aa31.43■■■□□ 2.62
PDLIM4-205ENST00000463615 TOM1O60784 492 aa31.42■■■□□ 2.62
PDLIM4-205ENST00000463615 E9PCH4 1651 aa31.37■■■□□ 2.61
PDLIM4-205ENST00000463615 ITGAEP38570 1179 aa31.36■■■□□ 2.61
PDLIM4-205ENST00000463615 ALKQ9UM73 1620 aa31.35■■■□□ 2.61
PDLIM4-205ENST00000463615 NUP155O75694 1391 aa31.35■■■□□ 2.61
PDLIM4-205ENST00000463615 ZFYVE9O95405 1425 aa31.33■■■□□ 2.61
PDLIM4-205ENST00000463615 TMEM131LA2VDJ0 1609 aa31.32■■■□□ 2.6
PDLIM4-205ENST00000463615 HDGFP51858 240 aaKnown RBP31.26■■■□□ 2.59
PDLIM4-205ENST00000463615 KCNA6P17658 529 aa31.25■■■□□ 2.59
PDLIM4-205ENST00000463615 PIP4K2BP78356 416 aa31.25■■■□□ 2.59
PDLIM4-205ENST00000463615 DISP3Q9P2K9 1392 aa31.25■■■□□ 2.59
PDLIM4-205ENST00000463615 PLEKHG1Q9ULL1 1385 aa31.25■■■□□ 2.59
PDLIM4-205ENST00000463615 RIMS2Q9UQ26 1411 aa31.24■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms