RNA–Protein interactions for RNA: ENST00000463513.5

GPATCH4-204, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-204ENST00000463513 PTPRMP28827 1452 aa15.2■□□□□ 0.02
GPATCH4-204ENST00000463513 ZC3H13Q5T200 1668 aaKnown RBP15.19■□□□□ 0.02
GPATCH4-204ENST00000463513 CNTLNQ9NXG0 1405 aa15.19■□□□□ 0.02
GPATCH4-204ENST00000463513 ROCK1Q13464 1354 aa15.19■□□□□ 0.02
GPATCH4-204ENST00000463513 GCC2Q8IWJ2 1684 aa15.19■□□□□ 0.02
GPATCH4-204ENST00000463513 PTPRKQ15262 1439 aa15.18■□□□□ 0.02
GPATCH4-204ENST00000463513 KDM5DQ9BY66 1539 aa15.18■□□□□ 0.02
GPATCH4-204ENST00000463513 FAM135AQ9P2D6 1515 aa15.18■□□□□ 0.02
GPATCH4-204ENST00000463513 PLPPR3Q6T4P5 718 aa15.18■□□□□ 0.02
GPATCH4-204ENST00000463513 C3P01024 1663 aa15.18■□□□□ 0.02
GPATCH4-204ENST00000463513 CEP152O94986 1710 aa15.17■□□□□ 0.02
GPATCH4-204ENST00000463513 DEPDC5O75140 1603 aa15.17■□□□□ 0.02
GPATCH4-204ENST00000463513 PRDM15P57071 1507 aaPredicted RBP15.16■□□□□ 0.02
GPATCH4-204ENST00000463513 ANKRD50Q9ULJ7 1429 aa15.16■□□□□ 0.02
GPATCH4-204ENST00000463513 MROH1Q8NDA8 1641 aa15.14■□□□□ 0.01
GPATCH4-204ENST00000463513 KANK1Q14678 1352 aa15.13■□□□□ 0.01
GPATCH4-204ENST00000463513 CAMSAP1Q5T5Y3 1602 aa15.13■□□□□ 0.01
GPATCH4-204ENST00000463513 WASHC2CQ9Y4E1 1318 aa15.12■□□□□ 0.01
GPATCH4-204ENST00000463513 ABCC3O15438 1527 aa15.12■□□□□ 0.01
GPATCH4-204ENST00000463513 UNC13BO14795 1591 aa15.11■□□□□ 0.01
GPATCH4-204ENST00000463513 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.11■□□□□ 0.013e-6■■■■□ 21.4
GPATCH4-204ENST00000463513 PPP6R1Q9UPN7 881 aa15.11■□□□□ 0.01
GPATCH4-204ENST00000463513 PREX1Q8TCU6 1659 aa15.1■□□□□ 0.01
GPATCH4-204ENST00000463513 CFAP65Q6ZU64 1925 aaKnown RBP15.09■□□□□ 0.01
GPATCH4-204ENST00000463513 SETD1BQ9UPS6 1966 aaKnown RBP15.08■□□□□ 0
GPATCH4-204ENST00000463513 HFM1A2PYH4 1435 aa15.08■□□□□ 0
GPATCH4-204ENST00000463513 ZMYM3Q14202 1370 aa15.07■□□□□ 0
GPATCH4-204ENST00000463513 NAIPQ13075 1403 aa15.07■□□□□ 0
GPATCH4-204ENST00000463513 CEBPAP49715 358 aaPredicted RBP15.06■□□□□ 0
GPATCH4-204ENST00000463513 IQGAP3Q86VI3 1631 aa15.06■□□□□ 0
GPATCH4-204ENST00000463513 TET3O43151 1660 aa15.06■□□□□ 0
GPATCH4-204ENST00000463513 PZPP20742 1482 aa15.05■□□□□ -0
GPATCH4-204ENST00000463513 VWDEQ8N2E2 1590 aa15.05■□□□□ -0
GPATCH4-204ENST00000463513 MYO3AQ8NEV4 1616 aa15.05■□□□□ -0
GPATCH4-204ENST00000463513 EFCAB6Q5THR3 1501 aa15.04■□□□□ -0
GPATCH4-204ENST00000463513 NPATQ14207 1427 aa15.04■□□□□ -0
GPATCH4-204ENST00000463513 LMTK2Q8IWU2 1503 aa15.02■□□□□ -0
GPATCH4-204ENST00000463513 UHRF1BP1Q6BDS2 1440 aa15.02■□□□□ -0
GPATCH4-204ENST00000463513 NUP155O75694 1391 aa15□□□□□ -0.01
GPATCH4-204ENST00000463513 ZNF142P52746 1687 aaPredicted RBP15□□□□□ -0.01
GPATCH4-204ENST00000463513 ERVK-7P63135 1459 aa14.99□□□□□ -0.01
GPATCH4-204ENST00000463513 TNRQ92752 1358 aa14.98□□□□□ -0.01
GPATCH4-204ENST00000463513 SPATA31D1Q6ZQQ2 1576 aa14.98□□□□□ -0.01
GPATCH4-204ENST00000463513 E9PCH4 1651 aa14.98□□□□□ -0.01
GPATCH4-204ENST00000463513 LMTK3Q96Q04 1460 aa14.98□□□□□ -0.01
GPATCH4-204ENST00000463513 CEP170BQ9Y4F5 1589 aaPredicted RBP14.98□□□□□ -0.01
GPATCH4-204ENST00000463513 TRIM52Q96A61 297 aa14.97□□□□□ -0.01
GPATCH4-204ENST00000463513 ARHGAP31Q2M1Z3 1444 aa14.97□□□□□ -0.01
GPATCH4-204ENST00000463513 RPRD2Q5VT52 1461 aaKnown RBP14.96□□□□□ -0.01
GPATCH4-204ENST00000463513 SETD5Q9C0A6 1442 aa14.96□□□□□ -0.01
GPATCH4-204ENST00000463513 SPHKAPQ2M3C7 1700 aa14.95□□□□□ -0.02
GPATCH4-204ENST00000463513 FBXO31Q5XUX0 539 aaPredicted RBP14.94□□□□□ -0.02
GPATCH4-204ENST00000463513 NLRP1Q9C000 1473 aa14.94□□□□□ -0.02
GPATCH4-204ENST00000463513 RAB3GAP2Q9H2M9 1393 aa14.92□□□□□ -0.02
GPATCH4-204ENST00000463513 A2ML1A8K2U0 1454 aa14.92□□□□□ -0.02
GPATCH4-204ENST00000463513 ACIN1Q9UKV3 1341 aaKnown RBP14.92□□□□□ -0.02
GPATCH4-204ENST00000463513 SYNMO15061 1565 aa14.91□□□□□ -0.02
GPATCH4-204ENST00000463513 PIK3C2BO00750 1634 aa14.9□□□□□ -0.02
GPATCH4-204ENST00000463513 UGGT1Q9NYU2 1555 aa14.9□□□□□ -0.02
GPATCH4-204ENST00000463513 HSPA2P54652 639 aa14.89□□□□□ -0.03
GPATCH4-204ENST00000463513 POLR1AO95602 1720 aaPredicted RBP14.89□□□□□ -0.03
GPATCH4-204ENST00000463513 UBR1Q8IWV7 1749 aa14.89□□□□□ -0.03
GPATCH4-204ENST00000463513 TRIM26Q12899 539 aaPredicted RBP14.88□□□□□ -0.03
GPATCH4-204ENST00000463513 SLC4A1APQ9BWU0 796 aaKnown RBP14.88□□□□□ -0.03
GPATCH4-204ENST00000463513 NOS1P29475 1434 aa14.87□□□□□ -0.03
GPATCH4-204ENST00000463513 MYO5BQ9ULV0 1848 aa14.87□□□□□ -0.03
GPATCH4-204ENST00000463513 KDM5AP29375 1690 aaKnown RBP14.87□□□□□ -0.03
GPATCH4-204ENST00000463513 STAG3Q9UJ98 1225 aa14.86□□□□□ -0.03
GPATCH4-204ENST00000463513 ADGRB3O60242 1522 aa14.86□□□□□ -0.03
GPATCH4-204ENST00000463513 TRPM2O94759 1503 aa14.85□□□□□ -0.03
GPATCH4-204ENST00000463513 KIF1BO60333 1816 aa14.85□□□□□ -0.03
GPATCH4-204ENST00000463513 PKD2Q13563 968 aa14.84□□□□□ -0.03
GPATCH4-204ENST00000463513 STRCQ7RTU9 1775 aa14.83□□□□□ -0.03
GPATCH4-204ENST00000463513 PLA2R1Q13018 1463 aa14.82□□□□□ -0.04
GPATCH4-204ENST00000463513 CLTCL1P53675 1640 aa14.82□□□□□ -0.04
GPATCH4-204ENST00000463513 THEMISQ8N1K5 641 aaPredicted RBP14.81□□□□□ -0.04
GPATCH4-204ENST00000463513 MPHOSPH9Q99550 1183 aa14.81□□□□□ -0.04
GPATCH4-204ENST00000463513 SLC52A1Q9NWF4 448 aa14.81□□□□□ -0.04
GPATCH4-204ENST00000463513 CHGAP10645 457 aaKnown RBP14.8□□□□□ -0.04
GPATCH4-204ENST00000463513 TMEM131LA2VDJ0 1609 aa14.8□□□□□ -0.04
GPATCH4-204ENST00000463513 PTPRTO14522 1441 aa14.79□□□□□ -0.04
GPATCH4-204ENST00000463513 IDI1Q13907 227 aa14.78□□□□□ -0.04
GPATCH4-204ENST00000463513 HRCP23327 699 aa14.77□□□□□ -0.05
GPATCH4-204ENST00000463513 FOXD1Q16676 465 aa14.77□□□□□ -0.05
GPATCH4-204ENST00000463513 IQGAP1P46940 1657 aa14.77□□□□□ -0.05
GPATCH4-204ENST00000463513 CCDC144AA2RUR9 1427 aa14.76□□□□□ -0.05
GPATCH4-204ENST00000463513 SLIT1O75093 1534 aa14.76□□□□□ -0.05
GPATCH4-204ENST00000463513 DMRT2Q9Y5R5 561 aa14.75□□□□□ -0.05
GPATCH4-204ENST00000463513 NEURL4Q96JN8 1562 aa14.75□□□□□ -0.05
GPATCH4-204ENST00000463513 SCAF11Q99590 1463 aaKnown RBP14.75□□□□□ -0.05
GPATCH4-204ENST00000463513 NCKAP5LQ9HCH0 1330 aa14.74□□□□□ -0.05
GPATCH4-204ENST00000463513 ANKLE2Q86XL3 938 aa14.74□□□□□ -0.05
GPATCH4-204ENST00000463513 EID1Q9Y6B2 187 aa14.74□□□□□ -0.05
GPATCH4-204ENST00000463513 TMEM2Q9UHN6 1383 aa14.73□□□□□ -0.05
GPATCH4-204ENST00000463513 ARHGAP23Q9P227 1491 aa14.73□□□□□ -0.05
GPATCH4-204ENST00000463513 PPP1R15AO75807 674 aaPredicted RBP14.72□□□□□ -0.05
GPATCH4-204ENST00000463513 ZNF326Q5BKZ1 582 aaKnown RBP14.72□□□□□ -0.05
GPATCH4-204ENST00000463513 NPHP4O75161 1426 aaPredicted RBP14.71□□□□□ -0.05
GPATCH4-204ENST00000463513 RIMS2Q9UQ26 1411 aa14.71□□□□□ -0.05
GPATCH4-204ENST00000463513 TXNDC2Q86VQ3 553 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms